Wall clock time and date at job start Tue Mar 31 2020 00:55:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46503 * 109.46965 * 115.27624 * 3 2 1 5 5 C 1.36691 * 120.00169 * 97.02352 * 4 3 2 6 6 H 1.07997 * 120.00514 * 154.51916 * 5 4 3 7 7 C 1.39174 * 119.99824 * 334.52341 * 5 4 3 8 8 N 1.31283 * 119.99891 * 351.79245 * 7 5 4 9 9 Si 1.86802 * 119.99898 * 171.78895 * 7 5 4 10 10 H 1.48501 * 109.46993 * 90.00192 * 9 7 5 11 11 H 1.48503 * 109.47229 * 210.00220 * 9 7 5 12 12 H 1.48495 * 109.47187 * 330.00063 * 9 7 5 13 13 C 1.34778 * 120.00088 * 277.02371 * 4 3 2 14 14 O 1.21550 * 120.00082 * 184.86107 * 13 4 3 15 15 C 1.48161 * 119.99662 * 4.85868 * 13 4 3 16 16 N 1.33228 * 120.57776 * 6.96962 * 15 13 4 17 17 C 1.31510 * 120.73606 * 179.97438 * 16 15 13 18 18 C 1.50710 * 119.01248 * 179.97438 * 17 16 15 19 19 N 1.31931 * 121.97053 * 0.02562 * 17 16 15 20 20 C 1.32184 * 121.08222 * 359.97438 * 19 17 16 21 21 C 1.38907 * 119.13494 * 359.74687 * 20 19 17 22 22 Cl 1.73597 * 120.88913 * 180.27515 * 21 20 19 23 23 H 4.40648 * 5.51399 * 180.02562 * 4 1 2 24 24 H 1.09004 * 109.46783 * 355.28045 * 3 2 1 25 25 H 1.09000 * 109.47084 * 235.27479 * 3 2 1 26 26 H 0.97008 * 119.99511 * 179.97438 * 8 7 5 27 27 H 1.08997 * 109.46905 * 90.00223 * 18 17 16 28 28 H 1.08996 * 109.46847 * 210.00362 * 18 17 16 29 29 H 1.09004 * 109.46936 * 330.00779 * 18 17 16 30 30 H 1.07994 * 120.43346 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1341 0.5906 -1.2490 5 6 3.4977 1.9078 -1.2864 6 1 4.2130 2.2499 -2.0197 7 6 2.9463 2.8079 -0.3795 8 7 1.9621 2.4311 0.4033 9 14 3.6067 4.5523 -0.2761 10 1 2.8557 5.4224 -1.2165 11 1 3.4424 5.0625 1.1088 12 1 5.0467 4.5587 -0.6384 13 6 3.2244 -0.1652 -2.3612 14 8 3.7115 0.2989 -3.3735 15 6 2.7301 -1.5619 -2.3498 16 7 2.0708 -2.0389 -1.2949 17 6 1.6302 -3.2779 -1.2817 18 6 0.8896 -3.7774 -0.0678 19 7 1.8180 -4.0970 -2.2987 20 6 2.4624 -3.7020 -3.3831 21 6 2.9423 -2.4000 -3.4480 22 17 3.7886 -1.8311 -4.8529 23 1 -1.0502 0.0001 0.0003 24 1 3.0098 -1.0234 0.0846 25 1 3.0091 0.5862 0.8446 26 1 1.5780 3.0585 1.0357 27 1 -0.1767 -3.5866 -0.1889 28 1 1.0566 -4.8486 0.0443 29 1 1.2533 -3.2581 0.8189 30 1 2.6106 -4.3814 -4.2094 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490986490.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 00:55:15 Heat of formation + Delta-G solvation = 102.034855 kcal Electronic energy + Delta-G solvation = -19494.965581 eV Core-core repulsion = 16319.962956 eV Total energy + Delta-G solvation = -3175.002625 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 279.052 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.87170 -38.40628 -36.27413 -35.22432 -33.63207 -32.59513 -31.94777 -31.18750 -28.05903 -26.60177 -25.82582 -24.10101 -22.65251 -19.91624 -17.91637 -17.81408 -16.82045 -16.42504 -15.79823 -15.22739 -15.06093 -14.28378 -14.20323 -13.90356 -13.35101 -12.86749 -12.78222 -12.28601 -12.25742 -12.19149 -11.62860 -11.44411 -11.16288 -10.87564 -10.84843 -10.70377 -10.49673 -10.34392 -9.40613 -9.37165 -8.96293 -8.78063 -8.67522 -8.24571 -7.93455 -6.51737 -4.06288 0.82509 1.10511 2.43570 3.06574 3.14940 3.19525 3.49859 3.79250 4.06663 4.09816 4.19372 4.28348 4.44340 4.50529 4.95578 5.10604 5.20229 5.38539 5.66059 5.70040 5.72689 5.95919 6.02364 6.45187 6.67490 6.84223 7.06019 7.19495 7.31769 7.87117 8.19956 8.30366 8.92285 9.03765 9.11156 9.73435 10.43365 Molecular weight = 279.05amu Principal moments of inertia in cm(-1) A = 0.019533 B = 0.007532 C = 0.005641 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1433.155486 B = 3716.742856 C = 4962.133573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.290 4.290 2 C -0.063 4.063 3 C 0.235 3.765 4 N -0.396 5.396 5 C -0.300 4.300 6 H 0.109 0.891 7 C 0.033 3.967 8 N -0.843 5.843 9 Si 0.934 3.066 10 H -0.275 1.275 11 H -0.280 1.280 12 H -0.266 1.266 13 C 0.467 3.533 14 O -0.559 6.559 15 C 0.168 3.832 16 N -0.473 5.473 17 C 0.307 3.693 18 C -0.080 4.080 19 N -0.518 5.518 20 C 0.153 3.847 21 C -0.123 4.123 22 Cl -0.016 7.016 23 H 0.192 0.808 24 H 0.080 0.920 25 H 0.101 0.899 26 H 0.275 0.725 27 H 0.085 0.915 28 H 0.081 0.919 29 H 0.087 0.913 30 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.759 -9.613 0.205 9.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.309 4.309 2 C -0.065 4.065 3 C 0.112 3.888 4 N -0.111 5.111 5 C -0.428 4.428 6 H 0.127 0.873 7 C -0.174 4.174 8 N -0.479 5.479 9 Si 0.760 3.240 10 H -0.200 1.200 11 H -0.205 1.205 12 H -0.190 1.190 13 C 0.255 3.745 14 O -0.442 6.442 15 C 0.020 3.980 16 N -0.191 5.191 17 C 0.040 3.960 18 C -0.138 4.138 19 N -0.234 5.234 20 C -0.013 4.013 21 C -0.156 4.156 22 Cl 0.013 6.987 23 H 0.209 0.791 24 H 0.098 0.902 25 H 0.119 0.881 26 H 0.086 0.914 27 H 0.103 0.897 28 H 0.100 0.900 29 H 0.106 0.894 30 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges -1.001 -9.520 0.563 9.589 hybrid contribution 0.224 1.192 -0.761 1.432 sum -0.777 -8.329 -0.198 8.367 Atomic orbital electron populations 1.24006 0.95131 1.08538 1.03262 1.22557 0.93626 0.93061 0.97286 1.18573 0.85112 0.96788 0.88289 1.43669 1.51197 1.09571 1.06680 1.19878 1.22941 0.82103 1.17926 0.87309 1.25603 0.94870 1.00693 0.96273 1.69960 1.20608 1.36361 1.20924 0.85793 0.79624 0.80900 0.77688 1.20014 1.20541 1.19015 1.17413 0.88452 0.83982 0.84663 1.90712 1.49849 1.72167 1.31474 1.22240 0.91800 0.96038 0.87917 1.69134 1.10179 1.14235 1.25593 1.23387 0.92361 0.86076 0.94163 1.20526 0.99514 1.01456 0.92335 1.68212 1.16083 1.38036 1.01069 1.23129 0.90587 0.91812 0.95818 1.22726 1.03260 0.96233 0.93415 1.98388 1.74785 1.89050 1.36446 0.79103 0.90210 0.88107 0.91391 0.89653 0.90000 0.89426 0.81031 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.15 19.25 29.55 0.57 -5.58 16 2 C -0.06 -1.43 9.27 -37.12 -0.34 -1.78 16 3 C 0.23 5.32 4.75 -6.83 -0.03 5.28 16 4 N -0.40 -10.02 2.59 -118.91 -0.31 -10.33 16 5 C -0.30 -7.91 9.26 -15.04 -0.14 -8.05 16 6 H 0.11 2.96 7.41 -52.49 -0.39 2.57 16 7 C 0.03 0.82 5.13 -17.44 -0.09 0.73 16 8 N -0.84 -21.09 9.11 55.51 0.51 -20.58 16 9 Si 0.93 19.52 29.56 -169.99 -5.03 14.49 16 10 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 11 H -0.28 -5.69 7.11 56.52 0.40 -5.29 16 12 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 13 C 0.47 11.65 7.53 -12.18 -0.09 11.56 16 14 O -0.56 -14.98 13.90 5.32 0.07 -14.91 16 15 C 0.17 3.58 6.56 -82.61 -0.54 3.04 16 16 N -0.47 -9.22 4.81 -7.32 -0.04 -9.26 16 17 C 0.31 5.10 7.64 -157.32 -1.20 3.90 16 18 C -0.08 -1.00 10.31 36.01 0.37 -0.63 16 19 N -0.52 -8.30 10.31 -10.71 -0.11 -8.41 16 20 C 0.15 2.37 11.14 -17.15 -0.19 2.17 16 21 C -0.12 -2.28 6.40 -38.76 -0.25 -2.53 16 22 Cl -0.02 -0.28 26.27 -51.86 -1.36 -1.65 16 23 H 0.19 3.41 7.80 -54.08 -0.42 2.99 16 24 H 0.08 1.66 5.90 -51.93 -0.31 1.35 16 25 H 0.10 2.35 6.54 -51.93 -0.34 2.01 16 26 H 0.28 6.54 8.31 -40.82 -0.34 6.21 16 27 H 0.08 0.99 8.14 -51.93 -0.42 0.57 16 28 H 0.08 0.85 8.14 -51.93 -0.42 0.43 16 29 H 0.09 1.07 8.14 -51.93 -0.42 0.64 16 30 H 0.17 1.99 8.06 -52.49 -0.42 1.56 16 LS Contribution 283.54 15.07 4.27 4.27 Total: -1.00 -29.52 283.54 -6.21 -35.73 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -2.28 Total: 2.51 kcal Atomic # 6 Polarization: 10.06 SS G_CDS: -1.94 Total: 8.13 kcal Atomic # 7 Polarization: -48.63 SS G_CDS: 0.05 Total: -48.57 kcal Atomic # 8 Polarization: -14.98 SS G_CDS: 0.07 Total: -14.91 kcal Atomic # 14 Polarization: 19.52 SS G_CDS: -5.03 Total: 14.49 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -1.36 Total: -1.65 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.52 -6.21 -35.73 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490986490.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.763 kcal (2) G-P(sol) polarization free energy of solvation -29.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.728 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds