Wall clock time and date at job start Tue Mar 31 2020 01:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 Cl 1.80298 * 109.47268 * 2 1 4 4 Cl 1.80299 * 109.46891 * 239.99976 * 2 1 3 5 5 C 1.50696 * 109.46787 * 120.00107 * 2 1 3 6 6 O 1.21280 * 120.00730 * 14.86149 * 5 2 1 7 7 N 1.34788 * 119.99585 * 194.86338 * 5 2 1 8 8 C 1.46920 * 120.62987 * 353.98376 * 7 5 2 9 9 C 1.53193 * 108.77419 * 233.63112 * 8 7 5 10 10 C 1.53045 * 109.31263 * 305.36308 * 9 8 7 11 11 C 1.53047 * 109.53509 * 61.36364 * 10 9 8 12 12 H 1.08999 * 109.49698 * 58.59336 * 11 10 9 13 13 C 1.50701 * 109.51956 * 178.66967 * 11 10 9 14 14 H 1.07991 * 120.00328 * 359.85386 * 13 11 10 15 15 C 1.37884 * 119.99698 * 179.85270 * 13 11 10 16 16 N 1.31510 * 119.99966 * 0.02562 * 15 13 11 17 17 Si 1.86797 * 119.99949 * 179.97438 * 15 13 11 18 18 H 1.48503 * 109.46847 * 90.00541 * 17 15 13 19 19 H 1.48501 * 109.47172 * 210.00202 * 17 15 13 20 20 H 1.48497 * 109.47310 * 330.00551 * 17 15 13 21 21 C 1.46925 * 120.63001 * 174.00242 * 7 5 2 22 22 H 1.09011 * 109.46893 * 300.00183 * 1 2 3 23 23 H 1.09002 * 109.47394 * 59.99535 * 1 2 3 24 24 H 1.09001 * 109.47673 * 180.02562 * 1 2 3 25 25 H 1.08995 * 109.59003 * 113.84636 * 8 7 5 26 26 H 1.08998 * 109.70517 * 353.48232 * 8 7 5 27 27 H 1.08996 * 109.50178 * 185.41729 * 9 8 7 28 28 H 1.09002 * 109.50045 * 65.31182 * 9 8 7 29 29 H 1.09004 * 109.45752 * 301.35008 * 10 9 8 30 30 H 1.08999 * 109.45393 * 181.37614 * 10 9 8 31 31 H 0.97001 * 119.99976 * 179.97438 * 16 15 13 32 32 H 1.09000 * 109.58562 * 6.57996 * 21 7 5 33 33 H 1.08995 * 109.58731 * 246.15945 * 21 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 17 2.1311 1.6999 0.0000 4 17 2.1309 -0.8500 -1.4721 5 6 2.0323 -0.7104 1.2304 6 8 1.2773 -1.3988 1.8840 7 7 3.3206 -0.5808 1.6047 8 6 4.2780 0.1402 0.7549 9 6 5.4833 -0.7676 0.4903 10 6 6.0616 -1.2430 1.8252 11 6 5.0049 -2.0513 2.5818 12 1 4.6936 -2.9014 1.9748 13 6 5.5852 -2.5468 3.8814 14 1 6.6066 -2.3114 4.1413 15 6 4.8119 -3.3009 4.7385 16 7 3.5683 -3.5880 4.4217 17 14 5.5313 -3.9157 6.3490 18 1 5.2904 -2.9100 7.4147 19 1 4.8829 -5.1983 6.7231 20 1 6.9924 -4.1277 6.1896 21 6 3.7943 -1.1581 2.8701 22 1 -0.3633 0.5139 0.8901 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 4.6077 1.0463 1.2632 26 1 3.8044 0.4034 -0.1908 27 1 6.2439 -0.2120 -0.0582 28 1 5.1675 -1.6298 -0.0970 29 1 6.3544 -0.3794 2.4223 30 1 6.9342 -1.8695 1.6403 31 1 3.0244 -4.1187 5.0246 32 1 2.9998 -1.7534 3.3201 33 1 4.0844 -0.3578 3.5508 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000855254493.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:06:19 Heat of formation + Delta-G solvation = -56.554876 kcal Electronic energy + Delta-G solvation = -18626.768888 eV Core-core repulsion = 15545.996790 eV Total energy + Delta-G solvation = -3080.772098 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 279.053 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.79718 -37.06900 -36.67256 -36.06253 -33.43676 -31.94731 -31.78173 -29.83089 -25.90597 -25.03717 -23.16765 -21.85540 -19.80327 -18.51706 -17.30258 -16.40307 -16.17440 -15.66501 -14.64941 -14.19341 -14.02139 -13.59449 -13.44779 -12.90649 -12.71297 -12.33681 -12.24886 -12.05343 -11.95979 -11.50518 -11.34333 -11.09515 -10.98373 -10.87778 -10.64860 -10.47078 -10.31241 -10.13707 -9.90047 -9.43035 -9.15125 -8.91489 -8.47843 -7.88799 -6.02864 -4.11563 1.16427 1.55550 3.23215 3.25084 3.30916 3.36920 3.39352 4.16497 4.40039 4.51499 5.27000 5.34287 5.37412 5.41010 5.52655 5.71569 5.87891 6.02343 6.18711 6.31101 6.56084 6.63580 6.81308 6.94335 7.02570 7.12640 7.56054 7.81643 7.91085 8.05944 8.31107 8.48485 8.92470 9.54202 11.02458 Molecular weight = 279.05amu Principal moments of inertia in cm(-1) A = 0.027602 B = 0.005961 C = 0.005497 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1014.163360 B = 4695.778733 C = 5092.281665 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.074 3.926 3 Cl -0.124 7.124 4 Cl -0.116 7.116 5 C 0.509 3.491 6 O -0.504 6.504 7 N -0.581 5.581 8 C 0.094 3.906 9 C -0.133 4.133 10 C -0.111 4.111 11 C 0.041 3.959 12 H 0.031 0.969 13 C -0.520 4.520 14 H 0.059 0.941 15 C 0.062 3.938 16 N -0.881 5.881 17 Si 0.893 3.107 18 H -0.280 1.280 19 H -0.286 1.286 20 H -0.274 1.274 21 C 0.111 3.889 22 H 0.090 0.910 23 H 0.083 0.917 24 H 0.097 0.903 25 H 0.066 0.934 26 H 0.082 0.918 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.050 0.950 30 H 0.052 0.948 31 H 0.264 0.736 32 H 0.125 0.875 33 H 0.048 0.952 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.381 9.470 -10.623 14.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C 0.019 3.981 3 Cl -0.097 7.097 4 Cl -0.090 7.090 5 C 0.291 3.709 6 O -0.380 6.380 7 N -0.312 5.312 8 C -0.030 4.030 9 C -0.171 4.171 10 C -0.149 4.149 11 C 0.022 3.978 12 H 0.049 0.951 13 C -0.559 4.559 14 H 0.077 0.923 15 C -0.140 4.140 16 N -0.518 5.518 17 Si 0.721 3.279 18 H -0.206 1.206 19 H -0.212 1.212 20 H -0.199 1.199 21 C -0.009 4.009 22 H 0.109 0.891 23 H 0.101 0.899 24 H 0.116 0.884 25 H 0.084 0.916 26 H 0.100 0.900 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.142 0.858 33 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -3.833 9.059 -10.286 14.232 hybrid contribution 0.554 -0.178 0.658 0.879 sum -3.278 8.881 -9.628 13.502 Atomic orbital electron populations 1.22224 0.87096 1.05938 1.04599 1.27334 0.98864 0.82991 0.88873 1.98755 1.89613 1.23012 1.98349 1.98783 1.89874 1.78690 1.41614 1.19545 0.83900 0.82784 0.84651 1.90801 1.55511 1.38482 1.53203 1.48473 1.06734 1.52738 1.23282 1.22205 0.90838 0.94880 0.95037 1.21954 0.96555 0.99303 0.99338 1.21642 0.99406 0.99672 0.94178 1.18967 0.90201 0.93113 0.95557 0.95122 1.21077 0.98477 1.32959 1.03360 0.92267 1.25059 0.94937 0.95733 0.98315 1.69875 1.07131 1.38043 1.36778 0.86579 0.79235 0.78314 0.83804 1.20640 1.21194 1.19911 1.22465 1.01579 0.96188 0.80622 0.89115 0.89859 0.88449 0.91601 0.89971 0.92036 0.92011 0.93123 0.92892 0.92616 0.85760 0.93345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.72 8.13 37.16 0.30 -1.42 16 2 C 0.07 1.09 1.12 -27.88 -0.03 1.06 16 3 Cl -0.12 -1.62 24.61 -51.86 -1.28 -2.90 16 4 Cl -0.12 -1.64 26.68 -51.86 -1.38 -3.02 16 5 C 0.51 9.87 6.63 -10.98 -0.07 9.80 16 6 O -0.50 -11.56 15.41 5.56 0.09 -11.47 16 7 N -0.58 -11.53 2.96 -172.78 -0.51 -12.04 16 8 C 0.09 1.53 4.74 -3.71 -0.02 1.52 16 9 C -0.13 -2.22 6.08 -26.61 -0.16 -2.38 16 10 C -0.11 -2.20 5.11 -26.68 -0.14 -2.34 16 11 C 0.04 0.99 2.25 -91.65 -0.21 0.79 16 12 H 0.03 0.84 8.14 -51.93 -0.42 0.42 16 13 C -0.52 -13.88 8.57 -34.44 -0.29 -14.17 16 14 H 0.06 1.55 7.74 -52.49 -0.41 1.14 16 15 C 0.06 1.70 5.30 -17.82 -0.09 1.61 16 16 N -0.88 -25.25 11.39 55.43 0.63 -24.61 16 17 Si 0.89 21.01 29.54 -169.99 -5.02 15.99 16 18 H -0.28 -6.54 7.11 56.52 0.40 -6.13 16 19 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 20 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 21 C 0.11 2.62 5.41 -3.71 -0.02 2.60 16 22 H 0.09 1.08 8.14 -51.92 -0.42 0.66 16 23 H 0.08 0.79 8.14 -51.93 -0.42 0.36 16 24 H 0.10 1.24 7.94 -51.93 -0.41 0.83 16 25 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 26 H 0.08 1.21 3.60 -51.93 -0.19 1.03 16 27 H 0.06 0.85 8.14 -51.93 -0.42 0.43 16 28 H 0.06 1.08 8.14 -51.93 -0.42 0.65 16 29 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 30 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 31 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 32 H 0.12 3.41 5.11 -51.93 -0.27 3.15 16 33 H 0.05 1.13 8.14 -51.93 -0.42 0.71 16 LS Contribution 291.23 15.07 4.39 4.39 Total: -1.00 -28.94 291.23 -8.03 -36.97 By element: Atomic # 1 Polarization: 3.85 SS G_CDS: -4.21 Total: -0.36 kcal Atomic # 6 Polarization: -2.21 SS G_CDS: -0.73 Total: -2.94 kcal Atomic # 7 Polarization: -36.78 SS G_CDS: 0.12 Total: -36.66 kcal Atomic # 8 Polarization: -11.56 SS G_CDS: 0.09 Total: -11.47 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -5.02 Total: 15.99 kcal Atomic # 17 Polarization: -3.26 SS G_CDS: -2.66 Total: -5.92 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -28.94 -8.03 -36.97 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000855254493.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.584 kcal (2) G-P(sol) polarization free energy of solvation -28.941 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.971 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds