Wall clock time and date at job start Tue Mar 31 2020 00:14:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30825 * 125.96432 * 2 1 4 4 C 1.33251 * 109.82850 * 179.97438 * 3 2 1 5 5 C 1.50696 * 125.52599 * 179.97438 * 4 3 2 6 6 F 1.39904 * 109.47437 * 15.02498 * 5 4 3 7 7 F 1.39903 * 109.46874 * 135.02617 * 5 4 3 8 8 F 1.39904 * 109.46945 * 255.02795 * 5 4 3 9 9 N 1.30709 * 108.94310 * 0.02562 * 4 3 2 10 10 N 1.34434 * 125.95434 * 179.97438 * 2 1 3 11 11 C 1.46499 * 126.82568 * 359.76629 * 10 2 1 12 12 C 1.53005 * 109.46716 * 90.00053 * 11 10 2 13 13 O 1.42904 * 109.46546 * 179.97438 * 12 11 10 14 14 C 1.42900 * 113.99707 * 180.02562 * 13 12 11 15 15 C 1.50696 * 109.47452 * 180.02562 * 14 13 12 16 16 H 1.08003 * 119.99531 * 0.02562 * 15 14 13 17 17 C 1.37870 * 120.00425 * 179.97438 * 15 14 13 18 18 N 1.31510 * 120.00165 * 0.02562 * 17 15 14 19 19 Si 1.86803 * 120.00122 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.47167 * 0.02562 * 19 17 15 21 21 H 1.48503 * 109.47157 * 120.00283 * 19 17 15 22 22 H 1.48505 * 109.46924 * 240.00448 * 19 17 15 23 23 H 1.09003 * 109.46963 * 270.04529 * 1 2 3 24 24 H 1.09000 * 109.46797 * 30.03443 * 1 2 3 25 25 H 1.08988 * 109.47589 * 150.03703 * 1 2 3 26 26 H 1.08999 * 109.47205 * 209.99603 * 11 10 2 27 27 H 1.08998 * 109.47316 * 330.00276 * 11 10 2 28 28 H 1.08990 * 109.47183 * 299.99684 * 12 11 10 29 29 H 1.09003 * 109.47066 * 60.00552 * 12 11 10 30 30 H 1.09004 * 109.47263 * 300.00183 * 14 13 12 31 31 H 1.09004 * 109.47488 * 60.00059 * 14 13 12 32 32 H 0.97005 * 120.00321 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0589 0.0000 4 6 3.5553 0.6885 0.0006 5 6 4.7374 1.6233 0.0002 6 9 4.3129 2.9121 0.3411 7 9 5.6817 1.1813 0.9330 8 9 5.3148 1.6444 -1.2739 9 7 3.6194 -0.6170 0.0004 10 7 2.2963 -1.0882 0.0005 11 6 1.8626 -2.4875 0.0059 12 6 1.7069 -2.9787 -1.4348 13 8 1.2845 -4.3439 -1.4295 14 6 1.1087 -4.9029 -2.7328 15 6 0.6644 -6.3375 -2.6084 16 1 0.5292 -6.7781 -1.6316 17 6 0.4293 -7.0871 -3.7413 18 7 0.5933 -6.5505 -4.9307 19 14 -0.1222 -8.8652 -3.5870 20 1 -0.2320 -9.2266 -2.1508 21 1 -1.4449 -9.0318 -4.2414 22 1 0.8713 -9.7506 -4.2461 23 1 -0.3633 0.0008 1.0277 24 1 -0.3633 0.8897 -0.5144 25 1 -0.3634 -0.8902 -0.5132 26 1 2.6069 -3.0966 0.5189 27 1 0.9067 -2.5697 0.5231 28 1 0.9628 -2.3697 -1.9478 29 1 2.6630 -2.8966 -1.9520 30 1 0.3520 -4.3341 -3.2731 31 1 2.0524 -4.8604 -3.2767 32 1 0.4283 -7.0781 -5.7278 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000574098799.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 00:14:39 Heat of formation + Delta-G solvation = -113.022127 kcal Electronic energy + Delta-G solvation = -21146.032987 eV Core-core repulsion = 17114.971982 eV Total energy + Delta-G solvation = -4031.061006 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 279.094 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -50.39587 -47.92807 -47.89119 -42.66709 -37.32162 -34.90093 -33.14397 -32.82264 -30.03360 -28.90744 -27.49065 -26.30332 -23.26905 -22.45877 -21.81681 -20.97687 -18.82366 -18.60464 -18.37109 -16.89255 -16.72576 -16.06649 -15.54022 -15.24573 -14.79781 -14.74785 -14.47493 -14.33148 -14.30533 -14.02869 -14.01721 -13.75423 -13.63217 -13.26567 -12.84403 -12.75498 -12.33460 -12.18628 -11.32169 -11.20790 -10.98342 -10.90481 -10.56691 -10.33579 -10.08871 -9.97477 -9.28978 -9.09829 -8.41061 -6.24584 -4.27971 1.00244 1.54135 2.12817 2.25913 3.16125 3.21018 3.28004 3.33400 3.52424 4.00240 4.08154 4.22286 4.34621 4.53752 4.76156 5.10302 5.12360 5.17188 5.20931 5.28713 5.41000 5.52999 5.66434 5.84330 5.89082 6.37352 6.85623 7.20847 7.46134 7.62370 7.94503 8.27534 8.83178 9.37572 10.86755 Molecular weight = 279.09amu Principal moments of inertia in cm(-1) A = 0.033169 B = 0.003075 C = 0.002963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 843.962874 B = 9104.343714 C = 9446.179391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.293 3.707 3 N -0.510 5.510 4 C 0.131 3.869 5 C 0.578 3.422 6 F -0.154 7.154 7 F -0.161 7.161 8 F -0.162 7.162 9 N -0.253 5.253 10 N -0.351 5.351 11 C 0.124 3.876 12 C 0.051 3.949 13 O -0.390 6.390 14 C 0.197 3.803 15 C -0.520 4.520 16 H 0.069 0.931 17 C 0.058 3.942 18 N -0.896 5.896 19 Si 0.910 3.090 20 H -0.270 1.270 21 H -0.281 1.281 22 H -0.281 1.281 23 H 0.098 0.902 24 H 0.103 0.897 25 H 0.094 0.906 26 H 0.113 0.887 27 H 0.115 0.885 28 H 0.046 0.954 29 H 0.049 0.951 30 H 0.009 0.991 31 H 0.009 0.991 32 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.402 15.729 10.634 19.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.018 3.982 3 N -0.239 5.239 4 C -0.153 4.153 5 C 0.520 3.480 6 F -0.136 7.136 7 F -0.143 7.143 8 F -0.143 7.143 9 N -0.083 5.083 10 N -0.142 5.142 11 C 0.003 3.997 12 C -0.028 4.028 13 O -0.310 6.310 14 C 0.123 3.877 15 C -0.558 4.558 16 H 0.087 0.913 17 C -0.144 4.144 18 N -0.535 5.535 19 Si 0.737 3.263 20 H -0.194 1.194 21 H -0.207 1.207 22 H -0.207 1.207 23 H 0.117 0.883 24 H 0.122 0.878 25 H 0.112 0.888 26 H 0.132 0.868 27 H 0.133 0.867 28 H 0.064 0.936 29 H 0.068 0.932 30 H 0.027 0.973 31 H 0.027 0.973 32 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 2.899 15.414 10.600 18.930 hybrid contribution -0.156 -0.808 -0.451 0.939 sum 2.743 14.605 10.149 17.995 Atomic orbital electron populations 1.20554 0.82430 1.05975 1.05152 1.24554 0.97147 0.81429 0.95082 1.70267 0.99296 1.29544 1.24762 1.23607 0.93570 0.91097 1.07030 1.16264 0.79401 0.77841 0.74459 1.93258 1.89822 1.38486 1.92001 1.93262 1.66029 1.89318 1.65669 1.93274 1.85226 1.96353 1.39453 1.78090 0.98700 1.09793 1.21749 1.50482 1.02738 1.08640 1.52385 1.21903 1.02895 0.75016 0.99929 1.22422 0.99572 0.87471 0.93375 1.87809 1.88194 1.21205 1.33754 1.20311 0.95625 0.93804 0.77928 1.21040 1.46117 0.95037 0.93619 0.91287 1.24960 0.95310 0.99351 0.94788 1.69963 1.48744 1.37176 0.97589 0.86242 0.78271 0.83306 0.78455 1.19399 1.20731 1.20723 0.88350 0.87828 0.88770 0.86848 0.86674 0.93622 0.93240 0.97333 0.97336 0.92488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.60 10.00 36.01 0.36 -0.24 16 2 C 0.29 3.52 7.98 -155.69 -1.24 2.28 16 3 N -0.51 -7.11 11.00 -8.16 -0.09 -7.20 16 4 C 0.13 1.90 7.40 -156.85 -1.16 0.74 16 5 C 0.58 7.37 3.57 36.00 0.13 7.50 16 6 F -0.15 -1.89 17.16 2.25 0.04 -1.85 16 7 F -0.16 -2.00 17.30 2.25 0.04 -1.96 16 8 F -0.16 -2.08 17.30 2.25 0.04 -2.05 16 9 N -0.25 -3.85 12.70 32.42 0.41 -3.44 16 10 N -0.35 -4.68 3.64 -58.34 -0.21 -4.90 16 11 C 0.12 1.55 6.50 -4.04 -0.03 1.53 16 12 C 0.05 0.83 6.26 37.16 0.23 1.07 16 13 O -0.39 -8.44 10.33 -35.23 -0.36 -8.81 16 14 C 0.20 5.09 5.69 36.00 0.20 5.29 16 15 C -0.52 -14.55 9.43 -34.45 -0.32 -14.88 16 16 H 0.07 1.90 7.81 -52.48 -0.41 1.49 16 17 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 18 N -0.90 -25.92 13.29 55.43 0.74 -25.18 16 19 Si 0.91 20.96 29.54 -169.99 -5.02 15.94 16 20 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 21 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 22 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 23 H 0.10 0.52 8.14 -51.93 -0.42 0.10 16 24 H 0.10 0.66 8.14 -51.93 -0.42 0.24 16 25 H 0.09 0.64 7.77 -51.94 -0.40 0.24 16 26 H 0.11 1.41 8.14 -51.93 -0.42 0.99 16 27 H 0.12 1.13 7.73 -51.93 -0.40 0.72 16 28 H 0.05 0.71 8.14 -51.93 -0.42 0.28 16 29 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 30 H 0.01 0.23 8.14 -51.93 -0.42 -0.19 16 31 H 0.01 0.24 8.14 -51.93 -0.42 -0.18 16 32 H 0.27 7.17 8.31 -40.82 -0.34 6.83 16 LS Contribution 304.48 15.07 4.59 4.59 Total: -1.00 -31.65 304.48 -5.07 -36.72 By element: Atomic # 1 Polarization: -3.33 SS G_CDS: -3.31 Total: -6.64 kcal Atomic # 6 Polarization: 6.71 SS G_CDS: -1.93 Total: 4.78 kcal Atomic # 7 Polarization: -41.56 SS G_CDS: 0.85 Total: -40.72 kcal Atomic # 8 Polarization: -8.44 SS G_CDS: -0.36 Total: -8.81 kcal Atomic # 9 Polarization: -5.98 SS G_CDS: 0.12 Total: -5.86 kcal Atomic # 14 Polarization: 20.96 SS G_CDS: -5.02 Total: 15.94 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -31.65 -5.07 -36.72 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000574098799.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.307 kcal (2) G-P(sol) polarization free energy of solvation -31.647 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.068 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds