Wall clock time and date at job start Tue Mar 31 2020 01:41:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39612 * 119.95880 * 260.27929 * 3 2 1 5 5 C 1.38011 * 120.03445 * 179.76607 * 4 3 2 6 6 F 1.35102 * 120.01680 * 180.25027 * 5 4 3 7 7 C 1.39927 * 119.95930 * 0.51276 * 5 4 3 8 8 C 1.47625 * 120.03276 * 179.72432 * 7 5 4 9 9 O 1.21579 * 119.99827 * 270.01050 * 8 7 5 10 10 N 1.34776 * 120.00146 * 90.01910 * 8 7 5 11 11 C 1.46505 * 119.99974 * 179.97438 * 10 8 7 12 12 C 1.52990 * 109.47084 * 179.97438 * 11 10 8 13 13 C 1.50706 * 109.47069 * 180.02562 * 12 11 10 14 14 H 1.07994 * 119.99858 * 0.02562 * 13 12 11 15 15 C 1.37876 * 120.00107 * 179.97438 * 13 12 11 16 16 N 1.31516 * 119.99798 * 0.02562 * 15 13 12 17 17 Si 1.86799 * 120.00265 * 180.02562 * 15 13 12 18 18 H 1.48501 * 109.47020 * 89.99941 * 17 15 13 19 19 H 1.48497 * 109.47523 * 209.99914 * 17 15 13 20 20 H 1.48501 * 109.47067 * 330.00599 * 17 15 13 21 21 C 1.39925 * 119.92966 * 359.73703 * 7 5 4 22 22 F 1.35095 * 120.02093 * 179.97438 * 21 7 5 23 23 C 1.38002 * 119.95925 * 0.02562 * 21 7 5 24 24 H 1.08002 * 119.98852 * 0.02562 * 4 3 2 25 25 H 0.96995 * 119.99952 * 359.97438 * 10 8 7 26 26 H 1.08998 * 109.47230 * 300.00395 * 11 10 8 27 27 H 1.09005 * 109.46744 * 59.99771 * 11 10 8 28 28 H 1.08998 * 109.47521 * 300.00353 * 12 11 10 29 29 H 1.09005 * 109.47406 * 60.00312 * 12 11 10 30 30 H 0.97005 * 120.00001 * 180.02562 * 16 15 13 31 31 H 1.08005 * 119.98329 * 179.97438 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2651 0.2052 1.1922 5 6 4.6452 0.2013 1.1948 6 9 5.3194 0.3942 2.3496 7 6 5.3457 0.0029 -0.0001 8 6 6.8219 0.0045 -0.0002 9 8 7.4286 1.0438 -0.1731 10 7 7.4971 -1.1461 0.1913 11 6 8.9621 -1.1446 0.1907 12 6 9.4737 -2.5667 0.4281 13 6 10.9808 -2.5650 0.4281 14 1 11.5197 -1.6418 0.2745 15 6 11.6715 -3.7419 0.6251 16 7 11.0152 -4.8661 0.8126 17 14 13.5395 -3.7397 0.6258 18 1 14.0337 -3.5084 2.0069 19 1 14.0363 -5.0504 0.1354 20 1 14.0335 -2.6585 -0.2642 21 6 4.6454 -0.1967 -1.1950 22 9 5.3198 -0.3880 -2.3498 23 6 3.2654 -0.1971 -1.1932 24 1 2.7241 0.3624 2.1137 25 1 7.0130 -1.9752 0.3295 26 1 9.3247 -0.7835 -0.7717 27 1 9.3251 -0.4910 0.9840 28 1 9.1112 -2.9274 1.3906 29 1 9.1108 -3.2206 -0.3650 30 1 11.5011 -5.6940 0.9516 31 1 2.7245 -0.3508 -2.1153 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000272980890.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:41:31 Heat of formation + Delta-G solvation = -76.665179 kcal Electronic energy + Delta-G solvation = -20225.702443 eV Core-core repulsion = 16529.268555 eV Total energy + Delta-G solvation = -3696.433887 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 280.076 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -49.44834 -49.42866 -40.10022 -38.91434 -36.81298 -35.04313 -32.99951 -32.15145 -31.12601 -29.64822 -26.10639 -24.45409 -23.51933 -21.34093 -20.77970 -20.08802 -17.99151 -17.97372 -16.99004 -16.68893 -16.36990 -16.25583 -15.70795 -15.57605 -15.20320 -14.77177 -14.54261 -14.39081 -14.14176 -13.98626 -13.57453 -13.16832 -12.86048 -12.66315 -12.39804 -12.37446 -12.21168 -11.28250 -11.07736 -10.70223 -10.42101 -10.18828 -9.63378 -9.55302 -9.41437 -9.31350 -8.72032 -8.44167 -6.13119 -4.16314 -0.24302 0.34194 2.03216 2.07491 2.48862 2.85944 3.01278 3.24409 3.27627 3.34247 3.38844 3.42013 3.81692 4.21612 4.22147 4.36409 4.52594 4.67897 5.12644 5.12836 5.24227 5.31439 5.35167 5.96213 6.19717 6.24043 6.59213 6.68596 6.84725 7.43378 7.54468 7.71119 7.84515 8.17708 8.31809 8.89284 9.48870 10.98409 Molecular weight = 280.08amu Principal moments of inertia in cm(-1) A = 0.030830 B = 0.003337 C = 0.003300 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 907.991358 B = 8389.222753 C = 8482.031537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.392 5.392 2 C 0.254 3.746 3 C 0.044 3.956 4 C -0.119 4.119 5 C 0.168 3.832 6 F -0.110 7.110 7 C -0.164 4.164 8 C 0.551 3.449 9 O -0.523 6.523 10 N -0.703 5.703 11 C 0.119 3.881 12 C 0.012 3.988 13 C -0.523 4.523 14 H 0.060 0.940 15 C 0.060 3.940 16 N -0.893 5.893 17 Si 0.897 3.103 18 H -0.279 1.279 19 H -0.286 1.286 20 H -0.272 1.272 21 C 0.168 3.832 22 F -0.110 7.110 23 C -0.119 4.119 24 H 0.160 0.840 25 H 0.401 0.599 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.024 0.976 29 H 0.024 0.976 30 H 0.263 0.737 31 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.288 7.658 -1.282 18.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.066 5.066 2 C -0.062 4.062 3 C 0.041 3.959 4 C -0.140 4.140 5 C 0.148 3.852 6 F -0.088 7.088 7 C -0.170 4.170 8 C 0.334 3.666 9 O -0.400 6.400 10 N -0.352 5.352 11 C -0.002 4.002 12 C -0.025 4.025 13 C -0.561 4.561 14 H 0.078 0.922 15 C -0.142 4.142 16 N -0.532 5.532 17 Si 0.725 3.275 18 H -0.205 1.205 19 H -0.212 1.212 20 H -0.197 1.197 21 C 0.148 3.852 22 F -0.088 7.088 23 C -0.140 4.140 24 H 0.178 0.822 25 H 0.235 0.765 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.042 0.958 29 H 0.042 0.958 30 H 0.072 0.928 31 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -18.478 8.201 -1.378 20.263 hybrid contribution 1.474 -0.543 0.104 1.574 sum -17.004 7.658 -1.275 18.692 Atomic orbital electron populations 1.81318 1.11613 1.07238 1.06438 1.25202 0.92040 0.94508 0.94447 1.15269 0.84831 1.02607 0.93235 1.21076 0.91779 1.01936 0.99204 1.16932 0.88935 0.98493 0.80882 1.91647 1.80013 1.91635 1.45476 1.20440 0.96542 1.07121 0.92862 1.17713 0.85154 0.85165 0.78611 1.90841 1.68590 1.31543 1.49008 1.46354 1.09726 1.08996 1.70078 1.21888 0.74950 1.02019 1.01343 1.19338 0.96635 0.88737 0.97781 1.21023 0.90764 0.94357 1.50005 0.92168 1.24991 0.98859 0.95460 0.94924 1.69952 1.35704 0.98791 1.48759 0.86501 0.85131 0.77460 0.78409 1.20533 1.21152 1.19703 1.16926 0.88933 0.98396 0.80980 1.91645 1.79999 1.91661 1.45464 1.21074 0.91777 1.01974 0.99173 0.82208 0.76457 0.91976 0.91986 0.95778 0.95767 0.92788 0.82207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -3.89 18.54 41.83 0.78 -3.12 16 2 C 0.25 1.92 15.31 -22.47 -0.34 1.57 16 3 C 0.04 0.28 5.73 -106.94 -0.61 -0.33 16 4 C -0.12 -0.79 9.71 -39.15 -0.38 -1.17 16 5 C 0.17 1.65 7.28 -39.03 -0.28 1.37 16 6 F -0.11 -1.29 16.82 2.25 0.04 -1.25 16 7 C -0.16 -1.94 5.64 -104.80 -0.59 -2.53 16 8 C 0.55 9.01 6.51 -12.43 -0.08 8.93 16 9 O -0.52 -10.51 17.11 5.30 0.09 -10.42 16 10 N -0.70 -11.72 5.55 -61.32 -0.34 -12.06 16 11 C 0.12 2.43 5.61 -4.04 -0.02 2.41 16 12 C 0.01 0.30 5.09 -27.89 -0.14 0.16 16 13 C -0.52 -14.12 9.11 -34.44 -0.31 -14.44 16 14 H 0.06 1.59 7.74 -52.49 -0.41 1.19 16 15 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 16 N -0.89 -25.58 13.29 55.43 0.74 -24.84 16 17 Si 0.90 21.00 29.54 -169.99 -5.02 15.98 16 18 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 19 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 20 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 21 C 0.17 1.65 7.28 -39.04 -0.28 1.37 16 22 F -0.11 -1.28 16.82 2.25 0.04 -1.25 16 23 C -0.12 -0.79 9.71 -39.15 -0.38 -1.17 16 24 H 0.16 0.69 8.06 -52.49 -0.42 0.26 16 25 H 0.40 5.74 8.46 -40.82 -0.35 5.40 16 26 H 0.06 1.31 8.14 -51.93 -0.42 0.88 16 27 H 0.06 1.30 8.14 -51.93 -0.42 0.88 16 28 H 0.02 0.60 8.14 -51.93 -0.42 0.17 16 29 H 0.02 0.60 8.14 -51.93 -0.42 0.18 16 30 H 0.26 7.11 8.31 -40.82 -0.34 6.77 16 31 H 0.16 0.69 8.06 -52.48 -0.42 0.26 16 LS Contribution 304.60 15.07 4.59 4.59 Total: -1.00 -31.76 304.60 -5.05 -36.81 By element: Atomic # 1 Polarization: 0.26 SS G_CDS: -2.42 Total: -2.16 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -3.53 Total: -2.28 kcal Atomic # 7 Polarization: -41.19 SS G_CDS: 1.17 Total: -40.02 kcal Atomic # 8 Polarization: -10.51 SS G_CDS: 0.09 Total: -10.42 kcal Atomic # 9 Polarization: -2.57 SS G_CDS: 0.08 Total: -2.49 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.02 Total: 15.98 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -31.76 -5.05 -36.81 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000272980890.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.853 kcal (2) G-P(sol) polarization free energy of solvation -31.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds