Wall clock time and date at job start Tue Mar 31 2020 02:10:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31002 * 1 3 3 C 1.50699 * 119.99771 * 2 1 4 4 N 1.46494 * 109.47022 * 126.06229 * 3 2 1 5 5 C 1.46496 * 120.00472 * 277.00799 * 4 3 2 6 6 C 1.50709 * 109.47201 * 270.00095 * 5 4 3 7 7 H 1.07997 * 119.99619 * 359.97438 * 6 5 4 8 8 C 1.37875 * 119.99811 * 179.97438 * 6 5 4 9 9 N 1.31507 * 120.00148 * 0.02562 * 8 6 5 10 10 Si 1.86799 * 119.99630 * 180.02562 * 8 6 5 11 11 H 1.48501 * 109.47227 * 90.00182 * 10 8 6 12 12 H 1.48498 * 109.46990 * 210.00124 * 10 8 6 13 13 H 1.48501 * 109.47277 * 330.00049 * 10 8 6 14 14 C 1.34785 * 119.99810 * 97.01002 * 4 3 2 15 15 O 1.21511 * 119.99895 * 185.41052 * 14 4 3 16 16 C 1.48150 * 119.99838 * 5.41398 * 14 4 3 17 17 C 1.39871 * 120.91468 * 312.61364 * 16 14 4 18 18 C 1.38079 * 119.03395 * 180.02562 * 17 16 14 19 19 N 1.31848 * 120.92095 * 0.02562 * 18 17 16 20 20 C 1.31889 * 122.02731 * 359.68515 * 19 18 17 21 21 Cl 1.73601 * 119.57247 * 180.31469 * 20 19 18 22 22 C 1.38347 * 120.85939 * 0.58255 * 20 19 18 23 23 H 1.08001 * 120.00384 * 0.02562 * 1 2 3 24 24 H 1.07999 * 119.99537 * 179.97438 * 1 2 3 25 25 H 1.07998 * 120.00097 * 179.97438 * 2 1 3 26 26 H 1.09004 * 109.46730 * 6.06297 * 3 2 1 27 27 H 1.09004 * 109.47032 * 246.06665 * 3 2 1 28 28 H 1.08995 * 109.47239 * 29.99852 * 5 4 3 29 29 H 1.09001 * 109.47540 * 150.00612 * 5 4 3 30 30 H 0.97009 * 119.99825 * 179.97438 * 9 8 6 31 31 H 1.08006 * 120.48285 * 0.02562 * 17 16 14 32 32 H 1.07998 * 119.54138 * 180.02562 * 18 17 16 33 33 H 1.08000 * 120.50772 * 179.73114 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 3.0117 1.3215 1.1165 5 6 2.5577 1.6970 2.4578 6 6 2.7058 3.1858 2.6398 7 1 3.0991 3.7914 1.8368 8 6 2.3391 3.7744 3.8314 9 7 1.8606 3.0367 4.8093 10 14 2.5219 5.6197 4.0567 11 1 1.2734 6.2973 3.6241 12 1 2.7780 5.9206 5.4881 13 1 3.6598 6.1081 3.2370 14 6 4.3020 0.9911 0.9097 15 8 5.0664 0.9090 1.8507 16 6 4.7881 0.7281 -0.4648 17 6 4.0756 -0.1071 -1.3315 18 6 4.5645 -0.3257 -2.6042 19 7 5.6860 0.2396 -3.0056 20 6 6.3859 1.0379 -2.2231 21 17 7.8499 1.7550 -2.8201 22 6 5.9715 1.3070 -0.9309 23 1 -0.5401 0.9353 -0.0004 24 1 -0.5399 -0.9353 -0.0004 25 1 1.8500 -0.9353 0.0004 26 1 1.3600 2.1307 0.1085 27 1 2.6062 1.4113 -0.9393 28 1 1.5108 1.4187 2.5782 29 1 3.1598 1.1783 3.2037 30 1 1.6029 3.4509 5.6479 31 1 3.1564 -0.5741 -1.0100 32 1 4.0208 -0.9688 -3.2803 33 1 6.5513 1.9582 -0.2936 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292317499.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:10:54 Heat of formation + Delta-G solvation = 25.896906 kcal Electronic energy + Delta-G solvation = -19177.216293 eV Core-core repulsion = 16037.026512 eV Total energy + Delta-G solvation = -3140.189781 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.68699 -38.79526 -36.73251 -35.98556 -33.44403 -32.75145 -32.10821 -31.19623 -27.83986 -25.93905 -24.64897 -23.65616 -22.54971 -20.34882 -19.27437 -17.43330 -16.91217 -16.64422 -16.18595 -15.57834 -15.44607 -14.76760 -14.47680 -14.42063 -14.11820 -13.93349 -13.17598 -12.76301 -12.27454 -11.97966 -11.95354 -11.68796 -11.45432 -11.35517 -11.19871 -10.95477 -10.69402 -10.30643 -10.08199 -9.98049 -9.73850 -9.35240 -9.21147 -9.05887 -8.51618 -7.90513 -6.12967 -4.18655 0.70098 0.82134 1.65736 2.29960 3.07115 3.25228 3.32523 3.35980 3.49332 3.74279 4.32494 4.37929 4.57752 4.73628 4.81616 5.00421 5.11121 5.21768 5.22864 5.47241 5.47777 5.56316 5.89656 5.93415 6.06722 6.24685 6.65299 6.75682 6.92286 7.29024 7.36837 7.50618 7.82205 8.10957 8.14028 8.66434 8.87448 9.46850 10.95173 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.016377 B = 0.005359 C = 0.004372 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1709.344616 B = 5223.629456 C = 6402.485752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.178 4.178 3 C 0.126 3.874 4 N -0.579 5.579 5 C 0.246 3.754 6 C -0.533 4.533 7 H 0.058 0.942 8 C 0.064 3.936 9 N -0.892 5.892 10 Si 0.898 3.102 11 H -0.280 1.280 12 H -0.284 1.284 13 H -0.273 1.273 14 C 0.547 3.453 15 O -0.522 6.522 16 C -0.053 4.053 17 C -0.154 4.154 18 C 0.113 3.887 19 N -0.474 5.474 20 C 0.172 3.828 21 Cl -0.030 7.030 22 C -0.109 4.109 23 H 0.101 0.899 24 H 0.097 0.903 25 H 0.109 0.891 26 H 0.090 0.910 27 H 0.080 0.920 28 H 0.038 0.962 29 H 0.047 0.953 30 H 0.265 0.735 31 H 0.157 0.843 32 H 0.170 0.830 33 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.412 -6.161 -14.948 16.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.197 4.197 3 C 0.003 3.997 4 N -0.309 5.309 5 C 0.128 3.872 6 C -0.571 4.571 7 H 0.077 0.923 8 C -0.139 4.139 9 N -0.530 5.530 10 Si 0.726 3.274 11 H -0.206 1.206 12 H -0.210 1.210 13 H -0.198 1.198 14 C 0.332 3.668 15 O -0.399 6.399 16 C -0.065 4.065 17 C -0.174 4.174 18 C -0.043 4.043 19 N -0.185 5.185 20 C 0.008 3.992 21 Cl -0.002 7.002 22 C -0.130 4.130 23 H 0.119 0.881 24 H 0.115 0.885 25 H 0.126 0.874 26 H 0.108 0.892 27 H 0.098 0.902 28 H 0.056 0.944 29 H 0.065 0.935 30 H 0.074 0.926 31 H 0.174 0.826 32 H 0.187 0.813 33 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 2.169 -6.262 -15.089 16.480 hybrid contribution -0.173 1.200 0.938 1.533 sum 1.996 -5.062 -14.152 15.162 Atomic orbital electron populations 1.23868 0.95728 1.02055 0.99117 1.23375 0.96464 0.98624 1.01226 1.20818 0.92944 0.95773 0.90210 1.48187 1.06554 1.64226 1.11920 1.19387 0.95686 0.95784 0.76357 1.21401 1.43435 0.92358 0.99950 0.92349 1.24917 0.94893 0.98560 0.95515 1.69928 1.42806 1.35596 1.04690 0.86490 0.78466 0.84933 0.77525 1.20556 1.20993 1.19827 1.18019 0.83183 0.78810 0.86831 1.90797 1.54976 1.51527 1.42578 1.20696 0.94163 0.96017 0.95625 1.22907 1.01434 0.98565 0.94491 1.22616 0.90808 0.96618 0.94282 1.66851 1.06950 1.07727 1.37019 1.21469 0.91207 0.96243 0.90323 1.98405 1.32123 1.80630 1.89036 1.21915 0.96057 1.00454 0.94582 0.88077 0.88463 0.87376 0.89214 0.90199 0.94421 0.93465 0.92581 0.82568 0.81312 0.82898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.96 14.32 29.01 0.42 -1.54 16 2 C -0.18 -2.26 8.52 -36.03 -0.31 -2.57 16 3 C 0.13 1.92 5.35 -5.20 -0.03 1.89 16 4 N -0.58 -11.64 2.44 -177.44 -0.43 -12.08 16 5 C 0.25 6.17 5.21 -5.19 -0.03 6.14 16 6 C -0.53 -14.56 9.39 -34.44 -0.32 -14.89 16 7 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 8 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 9 N -0.89 -25.77 13.29 55.43 0.74 -25.04 16 10 Si 0.90 21.31 29.54 -169.99 -5.02 16.29 16 11 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 12 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 13 H -0.27 -6.48 7.11 56.52 0.40 -6.07 16 14 C 0.55 11.07 7.31 -12.19 -0.09 10.99 16 15 O -0.52 -12.81 16.58 5.36 0.09 -12.72 16 16 C -0.05 -0.84 5.02 -104.65 -0.53 -1.37 16 17 C -0.15 -1.87 7.58 -39.03 -0.30 -2.16 16 18 C 0.11 1.23 11.17 -17.60 -0.20 1.04 16 19 N -0.47 -6.27 10.31 -10.41 -0.11 -6.38 16 20 C 0.17 2.38 7.27 -17.49 -0.13 2.25 16 21 Cl -0.03 -0.38 29.10 -51.86 -1.51 -1.89 16 22 C -0.11 -1.63 9.60 -38.98 -0.37 -2.01 16 23 H 0.10 1.16 7.84 -52.49 -0.41 0.75 16 24 H 0.10 0.94 8.06 -52.49 -0.42 0.52 16 25 H 0.11 1.24 6.56 -52.49 -0.34 0.90 16 26 H 0.09 1.42 7.78 -51.93 -0.40 1.02 16 27 H 0.08 1.06 5.25 -51.93 -0.27 0.78 16 28 H 0.04 0.96 8.07 -51.93 -0.42 0.54 16 29 H 0.05 1.34 7.35 -51.93 -0.38 0.96 16 30 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 31 H 0.16 1.64 4.12 -52.48 -0.22 1.42 16 32 H 0.17 1.19 8.06 -52.49 -0.42 0.77 16 33 H 0.15 2.30 8.06 -52.49 -0.42 1.88 16 LS Contribution 306.06 15.07 4.61 4.61 Total: -1.00 -31.70 306.06 -6.87 -38.57 By element: Atomic # 1 Polarization: 2.44 SS G_CDS: -3.26 Total: -0.82 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -1.98 Total: -0.55 kcal Atomic # 7 Polarization: -43.69 SS G_CDS: 0.20 Total: -43.49 kcal Atomic # 8 Polarization: -12.81 SS G_CDS: 0.09 Total: -12.72 kcal Atomic # 14 Polarization: 21.31 SS G_CDS: -5.02 Total: 16.29 kcal Atomic # 17 Polarization: -0.38 SS G_CDS: -1.51 Total: -1.89 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -31.70 -6.87 -38.57 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292317499.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.464 kcal (2) G-P(sol) polarization free energy of solvation -31.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.567 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.897 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds