Wall clock time and date at job start Tue Mar 31 2020 02:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30992 * 1 3 3 C 1.50700 * 120.00079 * 2 1 4 4 N 1.46506 * 109.47189 * 124.99987 * 3 2 1 5 5 C 1.46497 * 120.00055 * 262.77014 * 4 3 2 6 6 C 1.50703 * 109.47041 * 269.99978 * 5 4 3 7 7 H 1.08001 * 119.99811 * 359.97438 * 6 5 4 8 8 C 1.37881 * 120.00140 * 179.97438 * 6 5 4 9 9 N 1.31508 * 120.00151 * 179.97438 * 8 6 5 10 10 Si 1.86802 * 119.99906 * 359.97438 * 8 6 5 11 11 H 1.48495 * 109.47064 * 89.99709 * 10 8 6 12 12 H 1.48499 * 109.47022 * 209.99867 * 10 8 6 13 13 H 1.48500 * 109.46932 * 329.99838 * 10 8 6 14 14 C 1.34772 * 119.99957 * 82.76371 * 4 3 2 15 15 O 1.21522 * 120.00157 * 183.03553 * 14 4 3 16 16 C 1.48114 * 120.00245 * 3.04551 * 14 4 3 17 17 C 1.39348 * 119.70809 * 173.16864 * 16 14 4 18 18 C 1.38521 * 119.07507 * 179.97438 * 17 16 14 19 19 C 1.38775 * 118.47935 * 0.02562 * 18 17 16 20 20 Cl 1.73597 * 120.33923 * 179.97438 * 19 18 17 21 21 C 1.38721 * 119.32259 * 359.97438 * 19 18 17 22 22 N 1.31482 * 120.88112 * 0.02562 * 21 19 18 23 23 H 1.07999 * 120.00498 * 179.97438 * 1 2 3 24 24 H 1.08002 * 119.99861 * 0.02562 * 1 2 3 25 25 H 1.07998 * 120.00302 * 180.02562 * 2 1 3 26 26 H 1.08999 * 109.47317 * 4.99934 * 3 2 1 27 27 H 1.08996 * 109.47611 * 244.99792 * 3 2 1 28 28 H 1.08998 * 109.47098 * 29.99358 * 5 4 3 29 29 H 1.08997 * 109.47778 * 149.99863 * 5 4 3 30 30 H 0.96994 * 120.00165 * 180.02562 * 9 8 6 31 31 H 1.07998 * 120.45950 * 0.24928 * 17 16 14 32 32 H 1.07997 * 120.76084 * 180.02562 * 18 17 16 33 33 H 1.08004 * 119.56032 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3099 0.0000 0.0000 3 6 2.0634 1.3051 0.0000 4 7 2.9937 1.3319 1.1315 5 6 2.6148 2.0064 2.3755 6 6 3.0429 3.4501 2.3146 7 1 3.5471 3.8273 1.4371 8 6 2.7907 4.2894 3.3791 9 7 3.1647 5.5491 3.3261 10 14 1.9180 3.6372 4.8964 11 1 2.9218 3.1213 5.8614 12 1 1.1402 4.7326 5.5292 13 1 0.9980 2.5393 4.5047 14 6 4.1981 0.7359 1.0279 15 8 4.9475 0.7101 1.9841 16 6 4.6083 0.1124 -0.2515 17 6 5.9055 -0.3751 -0.3974 18 6 6.2750 -0.9562 -1.5993 19 6 5.3333 -1.0295 -2.6160 20 17 5.7447 -1.7472 -4.1422 21 6 4.0599 -0.5233 -2.4003 22 7 3.7370 0.0230 -1.2488 23 1 -0.5401 -0.9353 -0.0004 24 1 -0.5400 0.9353 -0.0004 25 1 1.8500 -0.9353 -0.0004 26 1 1.3586 2.1316 0.0896 27 1 2.6213 1.4026 -0.9313 28 1 1.5336 1.9532 2.5029 29 1 3.1045 1.5176 3.2177 30 1 2.9877 6.1395 4.0751 31 1 6.6116 -0.3049 0.4168 32 1 7.2731 -1.3433 -1.7419 33 1 3.3241 -0.5780 -3.1891 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292497416.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:10:41 Heat of formation + Delta-G solvation = 40.156922 kcal Electronic energy + Delta-G solvation = -19241.435311 eV Core-core repulsion = 16101.863890 eV Total energy + Delta-G solvation = -3139.571421 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.74695 -38.63102 -36.87935 -35.87470 -33.20604 -32.73879 -32.07154 -31.31920 -28.27269 -25.73548 -24.43263 -23.87242 -22.19795 -20.08285 -19.20721 -17.32338 -17.08751 -16.91995 -16.51752 -15.44281 -15.03312 -14.92087 -14.45735 -14.22729 -13.85092 -13.42438 -13.27055 -12.88998 -12.53723 -12.33586 -12.18187 -11.72136 -11.63368 -11.45671 -11.07977 -10.89917 -10.52743 -10.18869 -10.08875 -9.89979 -9.51574 -9.23763 -9.13693 -8.85672 -8.59824 -7.76940 -6.09928 -4.09377 0.42691 0.93944 1.70874 2.55598 2.94417 3.29580 3.35484 3.37545 3.60564 3.90991 4.16466 4.39017 4.44236 4.64230 4.75973 4.96994 5.23256 5.34188 5.49330 5.53530 5.62507 5.71075 5.93856 6.12742 6.21115 6.51152 6.69186 6.89501 6.92836 6.99682 7.32325 7.52143 7.58158 8.13657 8.42961 8.76610 8.93500 9.49683 11.03264 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.025878 B = 0.004606 C = 0.004212 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1081.744283 B = 6077.636274 C = 6646.174579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.134 4.134 3 C 0.128 3.872 4 N -0.562 5.562 5 C 0.214 3.786 6 C -0.531 4.531 7 H 0.075 0.925 8 C 0.074 3.926 9 N -0.896 5.896 10 Si 0.875 3.125 11 H -0.273 1.273 12 H -0.284 1.284 13 H -0.265 1.265 14 C 0.556 3.444 15 O -0.532 6.532 16 C 0.098 3.902 17 C -0.102 4.102 18 C -0.072 4.072 19 C -0.079 4.079 20 Cl -0.057 7.057 21 C 0.106 3.894 22 N -0.431 5.431 23 H 0.090 0.910 24 H 0.096 0.904 25 H 0.099 0.901 26 H 0.079 0.921 27 H 0.115 0.885 28 H 0.035 0.965 29 H 0.039 0.961 30 H 0.265 0.735 31 H 0.158 0.842 32 H 0.150 0.850 33 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.109 -14.962 -13.545 20.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C -0.154 4.154 3 C 0.005 3.995 4 N -0.291 5.291 5 C 0.094 3.906 6 C -0.569 4.569 7 H 0.093 0.907 8 C -0.128 4.128 9 N -0.534 5.534 10 Si 0.702 3.298 11 H -0.198 1.198 12 H -0.210 1.210 13 H -0.189 1.189 14 C 0.341 3.659 15 O -0.408 6.408 16 C -0.040 4.040 17 C -0.123 4.123 18 C -0.099 4.099 19 C -0.108 4.108 20 Cl -0.029 7.029 21 C -0.054 4.054 22 N -0.143 5.143 23 H 0.109 0.891 24 H 0.115 0.885 25 H 0.118 0.882 26 H 0.098 0.902 27 H 0.132 0.868 28 H 0.052 0.948 29 H 0.057 0.943 30 H 0.075 0.925 31 H 0.175 0.825 32 H 0.167 0.833 33 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 0.682 -14.485 -12.870 19.389 hybrid contribution 0.433 -0.597 0.424 0.851 sum 1.115 -15.082 -12.446 19.586 Atomic orbital electron populations 1.23752 0.95871 1.01410 1.03090 1.23238 0.95557 0.99046 0.97528 1.21140 0.92729 0.94571 0.91016 1.47820 1.13977 1.51151 1.16103 1.19790 0.95803 0.93295 0.81748 1.21300 1.39154 0.92065 1.04402 0.90655 1.24831 0.95211 0.94667 0.98114 1.69887 1.46874 1.04732 1.31947 0.86866 0.80329 0.78914 0.83738 1.19841 1.21006 1.18932 1.17703 0.82646 0.79688 0.85849 1.90771 1.52189 1.60033 1.37850 1.21781 0.91180 0.96846 0.94217 1.22175 0.96860 0.95389 0.97907 1.21540 0.99792 0.97089 0.91447 1.22339 0.96853 1.02360 0.89288 1.98384 1.93688 1.81805 1.28982 1.23018 0.93309 0.93445 0.95636 1.68494 1.33855 1.12245 0.99674 0.89131 0.88525 0.88249 0.90223 0.86798 0.94755 0.94309 0.92502 0.82452 0.83255 0.81373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.69 14.32 29.02 0.42 -2.28 16 2 C -0.13 -2.00 8.70 -36.02 -0.31 -2.31 16 3 C 0.13 2.22 5.45 -5.19 -0.03 2.19 16 4 N -0.56 -11.94 2.46 -177.45 -0.44 -12.38 16 5 C 0.21 5.27 4.22 -5.19 -0.02 5.25 16 6 C -0.53 -15.22 9.94 -34.44 -0.34 -15.56 16 7 H 0.08 2.37 8.06 -52.49 -0.42 1.94 16 8 C 0.07 2.16 5.47 -17.82 -0.10 2.06 16 9 N -0.90 -27.51 13.96 55.43 0.77 -26.74 16 10 Si 0.87 21.49 27.47 -169.99 -4.67 16.82 16 11 H -0.27 -6.72 7.11 56.52 0.40 -6.32 16 12 H -0.28 -6.85 7.11 56.52 0.40 -6.45 16 13 H -0.26 -6.15 6.54 56.52 0.37 -5.78 16 14 C 0.56 11.58 7.58 -12.21 -0.09 11.49 16 15 O -0.53 -12.74 15.90 5.35 0.09 -12.66 16 16 C 0.10 1.57 6.62 -83.01 -0.55 1.02 16 17 C -0.10 -1.36 9.63 -39.06 -0.38 -1.73 16 18 C -0.07 -0.75 9.97 -39.28 -0.39 -1.14 16 19 C -0.08 -0.80 6.35 -39.20 -0.25 -1.05 16 20 Cl -0.06 -0.50 28.99 -51.86 -1.50 -2.00 16 21 C 0.11 1.15 10.98 -17.52 -0.19 0.96 16 22 N -0.43 -5.98 4.65 -9.77 -0.05 -6.03 16 23 H 0.09 1.04 8.06 -52.49 -0.42 0.62 16 24 H 0.10 1.25 7.84 -52.49 -0.41 0.84 16 25 H 0.10 1.47 7.53 -52.49 -0.40 1.08 16 26 H 0.08 1.42 7.67 -51.93 -0.40 1.02 16 27 H 0.11 1.86 5.26 -52.18 -0.27 1.58 16 28 H 0.03 0.81 7.13 -51.93 -0.37 0.44 16 29 H 0.04 1.01 6.81 -51.93 -0.35 0.66 16 30 H 0.27 7.59 8.31 -40.82 -0.34 7.25 16 31 H 0.16 2.04 7.66 -52.49 -0.40 1.64 16 32 H 0.15 1.13 8.06 -52.49 -0.42 0.70 16 33 H 0.17 1.38 8.06 -52.48 -0.42 0.96 16 LS Contribution 303.85 15.07 4.58 4.58 Total: -1.00 -32.42 303.85 -6.92 -39.34 By element: Atomic # 1 Polarization: 3.65 SS G_CDS: -3.46 Total: 0.19 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -2.24 Total: -1.11 kcal Atomic # 7 Polarization: -45.44 SS G_CDS: 0.29 Total: -45.15 kcal Atomic # 8 Polarization: -12.74 SS G_CDS: 0.09 Total: -12.66 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -4.67 Total: 16.82 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -1.50 Total: -2.00 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -32.42 -6.92 -39.34 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292497416.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.495 kcal (2) G-P(sol) polarization free energy of solvation -32.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.076 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.338 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds