Wall clock time and date at job start Tue Mar 31 2020 02:03:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38353 * 120.32880 * 2 1 4 4 N 1.31918 * 121.10625 * 180.28724 * 3 2 1 5 5 C 1.31828 * 121.86071 * 359.74297 * 4 3 2 6 6 Cl 1.73592 * 119.74083 * 179.97438 * 5 4 3 7 7 C 1.39714 * 120.52221 * 359.97438 * 5 4 3 8 8 C 1.47754 * 120.56701 * 180.02562 * 7 5 4 9 9 O 1.21559 * 120.00091 * 352.51134 * 8 7 5 10 10 N 1.34775 * 119.99882 * 172.50604 * 8 7 5 11 11 C 1.47067 * 136.05873 * 2.72647 * 10 8 7 12 12 C 1.53235 * 88.08636 * 207.20702 * 11 10 8 13 13 C 1.50707 * 114.32931 * 220.47373 * 12 11 10 14 14 H 1.07993 * 119.99987 * 93.75355 * 13 12 11 15 15 C 1.37871 * 119.99641 * 273.76010 * 13 12 11 16 16 N 1.31524 * 120.00242 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 119.99912 * 179.97438 * 15 13 12 18 18 H 1.48498 * 109.47219 * 359.97438 * 17 15 13 19 19 H 1.48504 * 109.47290 * 119.99943 * 17 15 13 20 20 H 1.48501 * 109.47138 * 239.99820 * 17 15 13 21 21 C 1.47072 * 136.05941 * 183.10185 * 10 8 7 22 22 C 1.38345 * 120.32899 * 179.75168 * 2 1 3 23 23 H 1.08996 * 109.47012 * 270.25149 * 1 2 3 24 24 H 1.09008 * 109.47066 * 30.24561 * 1 2 3 25 25 H 1.09000 * 109.47553 * 150.24663 * 1 2 3 26 26 H 1.07999 * 119.44980 * 0.02562 * 3 2 1 27 27 H 1.09005 * 113.47051 * 321.93845 * 11 10 8 28 28 H 1.09004 * 113.46768 * 92.37827 * 11 10 8 29 29 H 1.08999 * 114.02034 * 87.71871 * 12 11 10 30 30 H 0.97000 * 119.99579 * 180.02562 * 16 15 13 31 31 H 1.08998 * 113.46688 * 267.62727 * 21 10 8 32 32 H 1.09001 * 113.46605 * 38.05926 * 21 10 8 33 33 H 1.08002 * 120.84835 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2056 1.1942 0.0000 4 7 3.5247 1.2121 -0.0057 5 6 4.2357 0.1020 -0.0065 6 17 5.9693 0.1897 -0.0148 7 6 3.6049 -1.1447 -0.0009 8 6 4.4008 -2.3895 -0.0013 9 8 5.6070 -2.3397 -0.1437 10 7 3.7895 -3.5802 0.1564 11 6 2.4026 -4.0476 0.3014 12 6 2.9437 -5.2501 1.0819 13 6 2.2650 -6.5564 0.7589 14 1 2.6825 -7.2105 0.0079 15 6 1.1110 -6.9161 1.4221 16 7 0.6028 -6.1195 2.3370 17 14 0.2693 -8.5348 1.0212 18 1 1.0348 -9.2422 -0.0365 19 1 0.2138 -9.3794 2.2415 20 1 -1.1102 -8.2695 0.5398 21 6 4.2161 -4.9834 0.2659 22 6 2.2056 -1.1941 0.0052 23 1 -0.3633 0.0045 1.0276 24 1 -0.3633 0.8878 -0.5177 25 1 -0.3634 -0.8922 -0.5100 26 1 1.6620 2.1274 0.0004 27 1 1.7818 -3.3846 0.9040 28 1 1.9349 -4.3192 -0.6450 29 1 3.0532 -5.0719 2.1517 30 1 -0.2089 -6.3729 2.8038 31 1 4.2365 -5.5068 -0.6900 32 1 5.1344 -5.1145 0.8384 33 1 1.6849 -2.1403 0.0089 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000880670361.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:03:20 Heat of formation + Delta-G solvation = 40.425941 kcal Electronic energy + Delta-G solvation = -19202.757620 eV Core-core repulsion = 16063.197865 eV Total energy + Delta-G solvation = -3139.559755 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.65939 -39.21223 -37.18557 -36.38217 -33.71357 -32.83041 -32.21749 -29.14837 -27.29122 -25.59406 -25.36708 -24.16406 -22.41055 -20.51314 -18.73384 -17.23980 -17.18042 -16.79634 -16.39044 -15.31997 -15.00906 -14.67292 -14.39459 -14.04240 -13.60031 -13.27681 -13.00667 -12.89446 -12.54716 -12.31640 -12.03649 -11.68622 -11.42447 -11.34816 -11.10745 -11.04674 -10.77787 -10.40997 -10.04330 -9.89290 -9.53826 -9.29174 -8.94248 -8.83656 -8.65325 -7.97385 -6.27639 -4.33491 0.55429 0.99830 1.94913 3.05101 3.16939 3.26170 3.28664 3.34866 3.79130 4.25692 4.35866 4.56354 4.65519 4.76801 4.94150 5.01119 5.12976 5.46642 5.49031 5.72164 5.80391 5.86753 6.00831 6.05078 6.15441 6.31455 6.34906 6.37962 6.48839 6.69282 7.45162 7.55537 7.70366 8.07158 8.33594 8.60050 8.71560 9.34179 10.82035 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.021945 B = 0.004977 C = 0.004166 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1275.628778 B = 5624.588333 C = 6720.234250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.144 4.144 3 C 0.129 3.871 4 N -0.483 5.483 5 C 0.210 3.790 6 Cl 0.003 6.997 7 C -0.152 4.152 8 C 0.573 3.427 9 O -0.535 6.535 10 N -0.636 5.636 11 C 0.086 3.914 12 C 0.036 3.964 13 C -0.517 4.517 14 H 0.065 0.935 15 C 0.069 3.931 16 N -0.886 5.886 17 Si 0.896 3.104 18 H -0.271 1.271 19 H -0.282 1.282 20 H -0.283 1.283 21 C 0.104 3.896 22 C -0.046 4.046 23 H 0.078 0.922 24 H 0.072 0.928 25 H 0.075 0.925 26 H 0.166 0.834 27 H 0.066 0.934 28 H 0.080 0.920 29 H 0.070 0.930 30 H 0.264 0.736 31 H 0.076 0.924 32 H 0.061 0.939 33 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.558 11.196 -4.032 12.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.146 4.146 3 C -0.029 4.029 4 N -0.194 5.194 5 C 0.044 3.956 6 Cl 0.031 6.969 7 C -0.158 4.158 8 C 0.361 3.639 9 O -0.414 6.414 10 N -0.370 5.370 11 C -0.036 4.036 12 C 0.017 3.983 13 C -0.555 4.555 14 H 0.084 0.916 15 C -0.135 4.135 16 N -0.522 5.522 17 Si 0.723 3.277 18 H -0.195 1.195 19 H -0.208 1.208 20 H -0.209 1.209 21 C -0.018 4.018 22 C -0.072 4.072 23 H 0.097 0.903 24 H 0.091 0.909 25 H 0.094 0.906 26 H 0.183 0.817 27 H 0.084 0.916 28 H 0.098 0.902 29 H 0.088 0.912 30 H 0.074 0.926 31 H 0.094 0.906 32 H 0.079 0.921 33 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -0.350 12.242 -4.014 12.888 hybrid contribution -0.929 -1.422 -0.168 1.707 sum -1.279 10.820 -4.182 11.670 Atomic orbital electron populations 1.20747 0.89146 1.03557 1.03245 1.21010 0.98378 0.93586 1.01648 1.22751 0.88288 0.98035 0.93782 1.67140 1.08334 1.29843 1.14054 1.21782 0.88789 0.88543 0.96436 1.98436 1.04368 1.98368 1.95680 1.20716 0.94473 0.94139 1.06504 1.17348 0.86727 0.81801 0.77993 1.90808 1.13495 1.86308 1.50791 1.49858 1.12406 1.05484 1.69235 1.23824 0.82406 0.96804 1.00599 1.20322 0.89311 0.93105 0.95597 1.20937 1.09067 1.03323 1.22176 0.91635 1.25027 0.97088 0.97057 0.94289 1.69958 1.21259 1.36800 1.24230 0.86476 0.79337 0.83401 0.78482 1.19507 1.20817 1.20872 1.23383 1.00654 0.77360 1.00382 1.22609 0.92388 1.00551 0.91640 0.90297 0.90949 0.90627 0.81667 0.91559 0.90200 0.91194 0.92608 0.90564 0.92084 0.81546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.95 10.03 36.00 0.36 -0.59 16 2 C -0.14 -1.73 5.89 -104.54 -0.62 -2.34 16 3 C 0.13 1.55 10.85 -17.47 -0.19 1.36 16 4 N -0.48 -7.35 10.33 -10.01 -0.10 -7.45 16 5 C 0.21 3.57 7.31 -17.00 -0.12 3.45 16 6 Cl 0.00 0.04 26.23 -51.86 -1.36 -1.32 16 7 C -0.15 -2.65 5.89 -104.79 -0.62 -3.27 16 8 C 0.57 11.45 7.99 -12.37 -0.10 11.35 16 9 O -0.54 -11.76 14.83 5.31 0.08 -11.68 16 10 N -0.64 -12.58 3.69 -186.55 -0.69 -13.27 16 11 C 0.09 1.67 6.10 -8.65 -0.05 1.61 16 12 C 0.04 0.80 3.77 -91.39 -0.34 0.45 16 13 C -0.52 -12.49 8.83 -34.44 -0.30 -12.80 16 14 H 0.07 1.56 7.81 -52.49 -0.41 1.15 16 15 C 0.07 1.71 5.46 -17.82 -0.10 1.61 16 16 N -0.89 -22.94 13.26 55.43 0.74 -22.20 16 17 Si 0.90 19.23 29.54 -169.99 -5.02 14.21 16 18 H -0.27 -5.75 7.11 56.52 0.40 -5.34 16 19 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 20 H -0.28 -6.04 7.11 56.52 0.40 -5.64 16 21 C 0.10 2.08 8.19 -8.51 -0.07 2.01 16 22 C -0.05 -0.69 8.96 -38.87 -0.35 -1.03 16 23 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 24 H 0.07 0.47 8.09 -51.92 -0.42 0.05 16 25 H 0.07 0.65 8.09 -51.93 -0.42 0.23 16 26 H 0.17 1.34 8.06 -52.49 -0.42 0.92 16 27 H 0.07 1.25 6.14 -51.93 -0.32 0.93 16 28 H 0.08 1.50 8.10 -51.93 -0.42 1.08 16 29 H 0.07 1.71 8.11 -51.93 -0.42 1.29 16 30 H 0.26 6.52 8.31 -40.82 -0.34 6.18 16 31 H 0.08 1.46 8.10 -51.93 -0.42 1.03 16 32 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 33 H 0.17 2.45 4.00 -52.49 -0.21 2.24 16 LS Contribution 299.55 15.07 4.51 4.51 Total: -1.00 -28.20 299.55 -7.79 -35.99 By element: Atomic # 1 Polarization: 2.83 SS G_CDS: -3.44 Total: -0.61 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: -2.50 Total: 1.81 kcal Atomic # 7 Polarization: -42.86 SS G_CDS: -0.06 Total: -42.92 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: 0.08 Total: -11.68 kcal Atomic # 14 Polarization: 19.23 SS G_CDS: -5.02 Total: 14.21 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -1.36 Total: -1.32 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -28.20 -7.79 -35.99 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000880670361.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.419 kcal (2) G-P(sol) polarization free energy of solvation -28.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.993 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds