Wall clock time and date at job start Tue Mar 31 2020 02:04:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38603 * 120.74079 * 2 1 4 4 C 1.38720 * 119.35721 * 180.02562 * 3 2 1 5 5 Cl 1.73600 * 119.56067 * 180.02562 * 4 3 2 6 6 N 1.31622 * 120.87825 * 359.72276 * 4 3 2 7 7 C 1.32822 * 121.60858 * 0.56536 * 6 4 3 8 8 C 1.47995 * 119.72095 * 179.71433 * 7 6 4 9 9 O 1.21562 * 119.99820 * 174.12607 * 8 7 6 10 10 N 1.34774 * 120.00219 * 353.84622 * 8 7 6 11 11 C 1.36787 * 120.00470 * 175.09685 * 10 8 7 12 12 H 1.07994 * 120.00499 * 224.77950 * 11 10 8 13 13 C 1.39109 * 119.99458 * 44.77784 * 11 10 8 14 14 N 1.31330 * 120.00272 * 13.84864 * 13 11 10 15 15 Si 1.86801 * 119.99939 * 193.84376 * 13 11 10 16 16 H 1.48495 * 109.47188 * 90.00245 * 15 13 11 17 17 H 1.48498 * 109.47007 * 210.00329 * 15 13 11 18 18 H 1.48499 * 109.46942 * 329.99968 * 15 13 11 19 19 C 1.46499 * 120.00079 * 355.10089 * 10 8 7 20 20 C 1.53004 * 117.50134 * 182.11338 * 19 10 8 21 21 C 1.53006 * 117.50002 * 113.45384 * 19 10 8 22 22 C 1.38579 * 120.74402 * 180.02562 * 2 1 3 23 23 H 1.08992 * 109.47682 * 269.98176 * 1 2 3 24 24 H 1.09005 * 109.47346 * 29.98429 * 1 2 3 25 25 H 1.09002 * 109.47213 * 149.97972 * 1 2 3 26 26 H 1.08005 * 120.32316 * 0.03751 * 3 2 1 27 27 H 0.96996 * 120.00301 * 184.97657 * 14 13 11 28 28 H 1.08998 * 115.54984 * 327.79188 * 19 10 8 29 29 H 1.09002 * 117.49711 * 0.02562 * 20 19 10 30 30 H 1.09003 * 117.49445 * 145.01879 * 20 19 10 31 31 H 1.08996 * 117.50232 * 214.98012 * 21 19 10 32 32 H 1.09000 * 117.49693 * 359.97438 * 21 19 10 33 33 H 1.07998 * 120.45707 * 359.95645 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2155 1.1913 0.0000 4 6 3.6023 1.1578 -0.0005 5 17 4.4949 2.6467 0.0001 6 7 4.2503 0.0122 0.0044 7 6 3.6085 -1.1507 -0.0011 8 6 4.3792 -2.4141 -0.0016 9 8 3.8013 -3.4786 0.1012 10 7 5.7213 -2.3848 -0.1216 11 6 6.4425 -3.5428 -0.0216 12 1 7.3446 -3.5677 0.5716 13 6 6.0138 -4.6885 -0.6840 14 7 5.0883 -4.6031 -1.6119 15 14 6.7545 -6.3485 -0.2537 16 1 5.9599 -6.9789 0.8310 17 1 6.7371 -7.2241 -1.4529 18 1 8.1552 -6.1621 0.2029 19 6 6.4079 -1.1126 -0.3591 20 6 7.9272 -1.1519 -0.5356 21 6 7.3200 -0.5843 0.7498 22 6 2.2154 -1.1910 -0.0005 23 1 -0.3634 -0.0003 1.0275 24 1 -0.3634 0.8902 -0.5136 25 1 -0.3634 -0.8898 -0.5142 26 1 1.6929 2.1365 0.0006 27 1 4.7377 -5.4087 -2.0228 28 1 5.8519 -0.3806 -0.9449 29 1 8.4158 -2.1244 -0.4754 30 1 8.3707 -0.4455 -1.2373 31 1 7.3645 0.4953 0.8933 32 1 7.4090 -1.1830 1.6563 33 1 1.6952 -2.1374 -0.0002 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930615622.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:04:36 Heat of formation + Delta-G solvation = 46.933929 kcal Electronic energy + Delta-G solvation = -19787.926416 eV Core-core repulsion = 16648.648868 eV Total energy + Delta-G solvation = -3139.277548 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.16387 -38.13554 -36.47522 -35.90616 -33.85603 -32.88347 -31.06920 -30.41707 -27.78725 -25.64871 -23.42273 -22.36039 -21.51197 -20.87584 -19.66411 -17.23712 -16.45926 -16.03164 -15.75523 -15.11854 -14.63899 -14.56586 -14.11498 -13.66948 -13.33362 -13.08501 -12.85065 -12.53306 -12.51019 -11.90670 -11.58591 -11.38868 -11.15074 -11.08385 -10.92108 -10.79155 -10.61555 -10.23964 -9.89208 -9.77073 -9.35438 -8.96737 -8.76922 -8.59961 -8.06387 -7.07192 -6.13225 -3.95459 1.06359 1.36574 1.99705 3.28897 3.35079 3.36264 3.58307 4.18481 4.51485 4.63740 4.68696 4.98246 5.08388 5.12626 5.18892 5.31110 5.36855 5.53088 5.73795 5.75980 5.90390 5.98268 6.01587 6.08407 6.27685 6.43671 6.45908 6.62808 6.78108 7.02102 7.14612 7.53125 7.98166 8.20830 8.95272 9.07143 9.54610 10.19954 10.88415 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.019722 B = 0.006738 C = 0.005191 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1419.388000 B = 4154.798006 C = 5392.476539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.041 4.041 3 C -0.167 4.167 4 C 0.172 3.828 5 Cl -0.046 7.046 6 N -0.455 5.455 7 C 0.139 3.861 8 C 0.504 3.496 9 O -0.521 6.521 10 N -0.396 5.396 11 C -0.332 4.332 12 H 0.085 0.915 13 C 0.063 3.937 14 N -0.812 5.812 15 Si 0.914 3.086 16 H -0.277 1.277 17 H -0.285 1.285 18 H -0.271 1.271 19 C 0.094 3.906 20 C -0.189 4.189 21 C -0.194 4.194 22 C -0.128 4.128 23 H 0.077 0.923 24 H 0.070 0.930 25 H 0.075 0.925 26 H 0.138 0.862 27 H 0.267 0.733 28 H 0.129 0.871 29 H 0.102 0.898 30 H 0.082 0.918 31 H 0.083 0.917 32 H 0.084 0.916 33 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.233 11.692 1.874 12.946 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.049 4.049 3 C -0.189 4.189 4 C 0.006 3.994 5 Cl -0.017 7.017 6 N -0.170 5.170 7 C 0.001 3.999 8 C 0.291 3.709 9 O -0.398 6.398 10 N -0.113 5.113 11 C -0.460 4.460 12 H 0.103 0.897 13 C -0.149 4.149 14 N -0.445 5.445 15 Si 0.740 3.260 16 H -0.203 1.203 17 H -0.211 1.211 18 H -0.196 1.196 19 C -0.011 4.011 20 C -0.227 4.227 21 C -0.233 4.233 22 C -0.149 4.149 23 H 0.095 0.905 24 H 0.089 0.911 25 H 0.094 0.906 26 H 0.156 0.844 27 H 0.077 0.923 28 H 0.146 0.854 29 H 0.120 0.880 30 H 0.100 0.900 31 H 0.101 0.899 32 H 0.103 0.897 33 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -4.602 11.113 1.736 12.153 hybrid contribution -0.374 -0.463 0.124 0.608 sum -4.976 10.650 1.860 11.902 Atomic orbital electron populations 1.20787 0.89713 1.03392 1.02906 1.20208 0.96832 0.92066 0.95766 1.21633 0.92455 0.99293 1.05506 1.21688 0.88637 0.88747 1.00301 1.98374 1.77179 1.29515 1.96679 1.67617 1.39602 0.96968 1.12820 1.22073 0.91890 0.91856 0.94118 1.17335 0.82840 0.85566 0.85165 1.90642 1.68291 1.29041 1.51869 1.42640 1.03947 1.04883 1.59833 1.19111 1.10104 0.87204 1.29544 0.89729 1.25331 0.96403 0.99864 0.93326 1.69866 1.24970 1.29603 1.20092 0.86165 0.79186 0.82574 0.78060 1.20260 1.21091 1.19616 1.22154 0.89337 0.89265 1.00388 1.23202 0.97434 1.02537 0.99544 1.23124 1.07050 0.99434 0.93680 1.22082 0.94291 0.99221 0.99327 0.90462 0.91074 0.90650 0.84446 0.92290 0.85368 0.87960 0.89958 0.89868 0.89749 0.83332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.12 10.06 36.01 0.36 -0.75 16 2 C -0.04 -0.58 5.91 -104.36 -0.62 -1.20 16 3 C -0.17 -2.32 9.58 -39.27 -0.38 -2.70 16 4 C 0.17 2.81 7.27 -17.46 -0.13 2.68 16 5 Cl -0.05 -0.64 29.10 -51.86 -1.51 -2.15 16 6 N -0.45 -8.93 6.16 -6.95 -0.04 -8.97 16 7 C 0.14 3.01 6.63 -83.02 -0.55 2.46 16 8 C 0.50 13.30 7.03 -12.26 -0.09 13.21 16 9 O -0.52 -15.30 13.67 5.31 0.07 -15.22 16 10 N -0.40 -10.32 2.83 -108.74 -0.31 -10.63 16 11 C -0.33 -9.11 7.99 -15.02 -0.12 -9.23 16 12 H 0.09 2.23 7.20 -52.49 -0.38 1.85 16 13 C 0.06 1.74 4.54 -17.44 -0.08 1.66 16 14 N -0.81 -23.84 11.26 55.50 0.63 -23.22 16 15 Si 0.91 21.43 29.58 -169.99 -5.03 16.41 16 16 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 17 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 18 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 19 C 0.09 2.08 4.85 -67.93 -0.33 1.75 16 20 C -0.19 -3.72 9.80 -26.69 -0.26 -3.98 16 21 C -0.19 -3.73 10.38 -26.69 -0.28 -4.01 16 22 C -0.13 -2.35 9.33 -39.04 -0.36 -2.71 16 23 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.07 0.58 8.10 -51.93 -0.42 0.16 16 25 H 0.07 0.73 8.10 -51.93 -0.42 0.31 16 26 H 0.14 1.46 8.06 -52.48 -0.42 1.04 16 27 H 0.27 7.47 8.31 -40.82 -0.34 7.13 16 28 H 0.13 2.82 5.79 -51.93 -0.30 2.52 16 29 H 0.10 2.14 6.70 -51.93 -0.35 1.79 16 30 H 0.08 1.41 8.14 -51.93 -0.42 0.99 16 31 H 0.08 1.43 8.14 -51.93 -0.42 1.01 16 32 H 0.08 1.69 8.14 -51.93 -0.42 1.27 16 33 H 0.15 2.74 7.65 -52.49 -0.40 2.34 16 LS Contribution 299.79 15.07 4.52 4.52 Total: -1.00 -31.47 299.79 -8.02 -39.49 By element: Atomic # 1 Polarization: 6.10 SS G_CDS: -3.52 Total: 2.58 kcal Atomic # 6 Polarization: 0.02 SS G_CDS: -2.83 Total: -2.80 kcal Atomic # 7 Polarization: -43.10 SS G_CDS: 0.27 Total: -42.82 kcal Atomic # 8 Polarization: -15.30 SS G_CDS: 0.07 Total: -15.22 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.03 Total: 16.41 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -1.51 Total: -2.15 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -31.47 -8.02 -39.49 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930615622.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.423 kcal (2) G-P(sol) polarization free energy of solvation -31.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.490 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds