Wall clock time and date at job start Tue Mar 31 2020 01:36:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.43203 * 119.99805 * 299.96644 * 3 2 1 5 5 N 3.51042 * 140.68592 * 299.96968 * 2 1 3 6 6 C 1.41175 * 120.00015 * 119.96693 * 3 2 1 7 7 C 1.39018 * 119.99825 * 174.50973 * 6 3 2 8 8 H 1.08001 * 120.00024 * 333.19008 * 7 6 3 9 9 C 1.40824 * 119.99821 * 152.91934 * 7 6 3 10 10 N 1.30341 * 119.99724 * 165.17758 * 9 7 6 11 11 Si 1.86799 * 120.00018 * 345.17461 * 9 7 6 12 12 H 1.48498 * 109.46949 * 90.80212 * 11 9 7 13 13 H 1.48506 * 109.46789 * 210.79990 * 11 9 7 14 14 H 1.48499 * 109.47194 * 330.79795 * 11 9 7 15 15 N 1.38249 * 119.99715 * 354.50575 * 6 3 2 16 16 C 1.39865 * 119.99577 * 121.01856 * 15 6 3 17 17 C 1.38465 * 120.17182 * 353.89300 * 16 15 6 18 18 C 1.38676 * 120.51216 * 179.76783 * 17 16 15 19 19 C 1.36655 * 120.58211 * 0.51535 * 18 17 16 20 20 C 1.39796 * 119.94000 * 359.74057 * 19 18 17 21 21 C 1.46575 * 133.68256 * 180.02562 * 20 19 18 22 22 N 1.29754 * 107.42523 * 179.97438 * 21 20 19 23 23 O 1.41357 * 109.70755 * 0.02562 * 22 21 20 24 24 C 1.34868 * 109.30623 * 359.97438 * 23 22 21 25 25 H 0.97002 * 119.99623 * 179.97438 * 10 9 7 26 26 H 0.96994 * 120.00073 * 301.00963 * 15 6 3 27 27 H 1.07995 * 119.74505 * 0.02562 * 17 16 15 28 28 H 1.07995 * 119.70692 * 180.27539 * 18 17 16 29 29 H 1.07998 * 120.03175 * 179.76982 * 19 18 17 30 30 H 1.07995 * 126.28462 * 0.02945 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2843 -0.6185 1.0744 5 7 3.8520 -1.1110 1.9267 6 6 3.2737 0.6116 -1.0592 7 6 4.6590 0.7134 -1.0040 8 1 5.1605 0.7449 -0.0480 9 6 5.4089 0.7697 -2.1947 10 7 6.6549 1.1508 -2.1627 11 14 4.6178 0.2981 -3.8198 12 1 4.0237 1.5046 -4.4496 13 1 5.6472 -0.2759 -4.7232 14 1 3.5537 -0.7092 -3.5785 15 7 2.5869 1.1087 -2.1512 16 6 2.6923 2.4624 -2.4866 17 6 3.3795 3.3332 -1.6579 18 6 3.4925 4.6759 -1.9859 19 6 2.9190 5.1636 -3.1264 20 6 2.2157 4.3046 -3.9760 21 6 1.5005 4.4942 -5.2414 22 7 1.0271 3.3396 -5.5969 23 8 1.3807 2.3635 -4.6375 24 6 2.1002 2.9437 -3.6554 25 1 7.1715 1.1892 -2.9828 26 1 2.0321 0.5186 -2.6849 27 1 3.8346 2.9631 -0.7511 28 1 4.0352 5.3427 -1.3324 29 1 3.0093 6.2115 -3.3714 30 1 1.3891 5.4239 -5.7794 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001169082287.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:36:30 Heat of formation + Delta-G solvation = 129.005897 kcal Electronic energy + Delta-G solvation = -20628.435864 eV Core-core repulsion = 17391.609730 eV Total energy + Delta-G solvation = -3236.826134 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 280.070 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.60303 -38.82402 -36.73638 -35.33514 -34.81320 -34.16789 -33.23845 -31.13307 -29.85924 -28.26996 -27.38078 -23.35220 -22.62575 -22.03492 -20.95820 -19.14438 -17.96159 -17.58472 -17.15341 -16.40244 -15.92719 -15.67711 -15.17849 -14.73941 -13.85662 -13.53417 -13.31929 -13.09040 -12.87284 -12.75104 -12.39965 -12.03626 -11.87911 -11.75426 -11.64399 -11.59491 -11.45269 -11.35006 -11.23818 -11.01470 -10.97939 -10.63423 -10.19052 -9.66608 -8.64308 -8.37022 -7.85211 -7.06798 -5.53361 0.81594 1.51024 1.92115 2.28210 2.60384 2.72263 2.79544 2.85286 3.38952 3.52787 3.78560 3.86608 3.97841 4.14779 4.23137 4.29496 4.44712 4.91876 5.05098 5.23592 5.38081 5.43864 5.48213 5.60607 5.95792 6.05221 6.20023 6.32935 6.39375 6.61047 6.78571 6.94815 7.12742 7.30928 7.41406 7.63403 7.86786 8.12073 8.84869 9.04855 9.08804 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.015889 B = 0.007869 C = 0.006789 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1761.796339 B = 3557.515607 C = 4123.267095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.527 5.527 2 C 0.307 3.693 3 C -0.293 4.293 4 C 0.323 3.677 5 N -0.523 5.523 6 C 0.339 3.661 7 C -0.360 4.360 8 H 0.124 0.876 9 C 0.081 3.919 10 N -0.723 5.723 11 Si 0.918 3.082 12 H -0.251 1.251 13 H -0.283 1.283 14 H -0.250 1.250 15 N -0.690 5.690 16 C 0.215 3.785 17 C -0.116 4.116 18 C -0.101 4.101 19 C -0.100 4.100 20 C -0.169 4.169 21 C 0.103 3.897 22 N -0.294 5.294 23 O -0.095 6.095 24 C 0.028 3.972 25 H 0.305 0.695 26 H 0.407 0.593 27 H 0.158 0.842 28 H 0.133 0.867 29 H 0.128 0.872 30 H 0.207 0.793 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.570 10.486 -8.782 13.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.209 5.209 2 C -0.001 4.001 3 C -0.311 4.311 4 C 0.014 3.986 5 N -0.205 5.205 6 C 0.237 3.763 7 C -0.387 4.387 8 H 0.142 0.858 9 C -0.151 4.151 10 N -0.341 5.341 11 Si 0.743 3.257 12 H -0.175 1.175 13 H -0.211 1.211 14 H -0.173 1.173 15 N -0.317 5.317 16 C 0.114 3.886 17 C -0.140 4.140 18 C -0.120 4.120 19 C -0.122 4.122 20 C -0.174 4.174 21 C -0.098 4.098 22 N -0.035 5.035 23 O -0.107 6.107 24 C -0.028 4.028 25 H 0.117 0.883 26 H 0.245 0.755 27 H 0.175 0.825 28 H 0.151 0.849 29 H 0.146 0.854 30 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges -0.648 8.986 -8.296 12.247 hybrid contribution 0.325 0.254 -0.836 0.932 sum -0.323 9.240 -9.131 12.994 Atomic orbital electron populations 1.81088 1.12345 1.16378 1.11064 1.25192 0.91828 0.90959 0.92139 1.12835 0.82112 1.33399 1.02775 1.24621 0.92098 0.90724 0.91149 1.81090 1.09338 1.16884 1.13197 1.16808 0.89497 0.88132 0.81887 1.20089 0.89843 1.31860 0.96926 0.85793 1.26636 0.94827 0.91018 1.02661 1.69396 1.08518 1.22714 1.33447 0.86080 0.79771 0.81606 0.78292 1.17539 1.21057 1.17334 1.42246 1.51352 1.06347 1.31798 1.16600 0.97306 0.84727 0.89992 1.21090 1.00025 0.92368 1.00495 1.20585 0.99659 0.94983 0.96796 1.20163 0.98716 0.98902 0.94398 1.20533 1.06637 0.93060 0.97132 1.25990 0.92445 0.97902 0.93417 1.79739 1.17805 0.98266 1.07722 1.89107 1.62350 1.30534 1.28750 1.19646 0.98655 0.92728 0.91797 0.88297 0.75529 0.82499 0.84873 0.85441 0.77654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.53 -12.11 18.54 41.84 0.78 -11.33 16 2 C 0.31 6.69 14.82 -22.47 -0.33 6.36 16 3 C -0.29 -6.12 5.88 -104.93 -0.62 -6.74 16 4 C 0.32 7.18 14.04 -22.46 -0.32 6.87 16 5 N -0.52 -12.27 18.54 41.85 0.78 -11.49 16 6 C 0.34 6.61 4.48 -83.57 -0.37 6.24 16 7 C -0.36 -7.21 7.07 -38.32 -0.27 -7.48 16 8 H 0.12 2.68 7.46 -52.49 -0.39 2.29 16 9 C 0.08 1.58 5.15 -17.21 -0.09 1.49 16 10 N -0.72 -14.31 13.90 55.59 0.77 -13.54 16 11 Si 0.92 16.64 24.40 -169.99 -4.15 12.49 16 12 H -0.25 -4.60 5.46 56.52 0.31 -4.29 16 13 H -0.28 -5.14 7.11 56.52 0.40 -4.73 16 14 H -0.25 -4.56 6.67 56.52 0.38 -4.18 16 15 N -0.69 -12.67 2.26 -8.10 -0.02 -12.69 16 16 C 0.22 3.73 4.44 -83.61 -0.37 3.36 16 17 C -0.12 -1.84 8.70 -39.34 -0.34 -2.18 16 18 C -0.10 -1.31 9.97 -39.99 -0.40 -1.71 16 19 C -0.10 -1.20 10.05 -39.57 -0.40 -1.60 16 20 C -0.17 -2.39 6.35 -105.18 -0.67 -3.06 16 21 C 0.10 1.24 12.32 -15.07 -0.19 1.06 16 22 N -0.29 -4.58 12.81 31.94 0.41 -4.17 16 23 O -0.10 -1.72 12.07 7.55 0.09 -1.63 16 24 C 0.03 0.48 6.13 -38.31 -0.23 0.25 16 25 H 0.31 5.44 8.29 -40.82 -0.34 5.10 16 26 H 0.41 7.38 7.91 -40.82 -0.32 7.05 16 27 H 0.16 2.58 6.10 -52.49 -0.32 2.26 16 28 H 0.13 1.35 8.06 -52.49 -0.42 0.93 16 29 H 0.13 1.08 8.06 -52.49 -0.42 0.66 16 30 H 0.21 1.36 8.06 -52.49 -0.42 0.94 16 LS Contribution 285.09 15.07 4.30 4.30 Total: -1.00 -25.99 285.09 -3.20 -29.19 By element: Atomic # 1 Polarization: 7.58 SS G_CDS: -1.55 Total: 6.02 kcal Atomic # 6 Polarization: 7.45 SS G_CDS: -4.60 Total: 2.85 kcal Atomic # 7 Polarization: -55.94 SS G_CDS: 2.72 Total: -53.22 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: 0.09 Total: -1.63 kcal Atomic # 14 Polarization: 16.64 SS G_CDS: -4.15 Total: 12.49 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -25.99 -3.20 -29.19 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001169082287.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 158.192 kcal (2) G-P(sol) polarization free energy of solvation -25.989 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds