Wall clock time and date at job start Tue Mar 31 2020 02:05:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.30074 * 124.95067 * 2 1 4 4 C 1.35874 * 109.64469 * 179.97438 * 3 2 1 5 5 C 1.39757 * 133.50937 * 180.02562 * 4 3 2 6 6 C 1.36548 * 119.95507 * 179.72217 * 5 4 3 7 7 C 1.39222 * 120.61763 * 0.48657 * 6 5 4 8 8 O 1.35949 * 119.83830 * 179.77040 * 7 6 5 9 9 C 1.42897 * 117.00103 * 180.02562 * 8 7 6 10 10 H 1.09001 * 109.47442 * 23.87474 * 9 8 7 11 11 C 1.50700 * 109.46677 * 143.87162 * 9 8 7 12 12 H 1.07999 * 120.00874 * 25.53544 * 11 9 8 13 13 C 1.37886 * 119.99671 * 205.53582 * 11 9 8 14 14 N 1.31515 * 119.99888 * 185.07429 * 13 11 9 15 15 Si 1.86794 * 119.99936 * 5.07559 * 13 11 9 16 16 H 1.48506 * 109.47397 * 94.52717 * 15 13 11 17 17 H 1.48501 * 109.47112 * 214.52702 * 15 13 11 18 18 H 1.48502 * 109.47201 * 334.52489 * 15 13 11 19 19 C 1.52999 * 109.47400 * 263.86980 * 9 8 7 20 20 Cl 1.80301 * 109.46941 * 63.43803 * 19 9 8 21 21 C 1.38310 * 120.32859 * 359.49840 * 7 6 5 22 22 C 1.38799 * 119.64896 * 0.25016 * 21 7 6 23 23 N 1.36142 * 124.95923 * 179.97438 * 2 1 3 24 24 H 0.97003 * 126.35135 * 0.02562 * 23 2 1 25 25 H 1.08997 * 109.47225 * 89.97864 * 1 2 3 26 26 H 1.09002 * 109.46671 * 209.97424 * 1 2 3 27 27 H 1.08996 * 109.47263 * 329.97374 * 1 2 3 28 28 H 1.08004 * 120.02193 * 359.95015 * 5 4 3 29 29 H 1.08000 * 119.68895 * 180.24091 * 6 5 4 30 30 H 0.97005 * 120.00125 * 180.02562 * 14 13 11 31 31 H 1.08993 * 109.47260 * 183.44211 * 19 9 8 32 32 H 1.09002 * 109.46579 * 303.44212 * 19 9 8 33 33 H 1.08002 * 120.17894 * 180.23175 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2521 1.0661 0.0000 4 6 3.5627 0.7075 0.0006 5 6 4.7583 1.4311 0.0013 6 6 5.9542 0.7721 0.0075 7 6 5.9969 -0.6195 0.0030 8 8 7.1964 -1.2594 0.0045 9 6 7.1695 -2.6881 -0.0009 10 1 6.2245 -3.0322 -0.4212 11 6 8.3102 -3.2087 -0.8368 12 1 9.1983 -2.6092 -0.9721 13 6 8.2202 -4.4507 -1.4290 14 7 9.2524 -4.9476 -2.0749 15 14 6.6320 -5.4272 -1.3140 16 1 5.8057 -5.1727 -2.5215 17 1 6.9469 -6.8758 -1.2262 18 1 5.8807 -5.0097 -0.1030 19 6 7.3092 -3.2064 1.4319 20 17 5.8917 -2.6670 2.4069 21 6 4.8251 -1.3542 0.0026 22 6 3.6026 -0.6970 0.0014 23 7 2.2871 -1.1158 0.0005 24 1 1.9762 -2.0347 0.0006 25 1 -0.3633 0.0004 -1.0276 26 1 -0.3633 -0.8903 0.5135 27 1 -0.3633 0.8897 0.5142 28 1 4.7364 2.5109 0.0006 29 1 6.8755 1.3356 0.0119 30 1 9.1890 -5.8212 -2.4918 31 1 7.3501 -4.2955 1.4219 32 1 8.2248 -2.8123 1.8730 33 1 4.8611 -2.4336 0.0028 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001228326081.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:05:50 Heat of formation + Delta-G solvation = 19.111197 kcal Electronic energy + Delta-G solvation = -19452.842493 eV Core-core repulsion = 16312.358462 eV Total energy + Delta-G solvation = -3140.484032 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.82119 -39.02318 -36.04902 -35.11034 -33.27193 -32.78399 -31.21652 -30.33273 -29.40214 -26.77292 -25.36334 -22.82927 -22.00251 -20.68857 -20.36098 -18.40460 -17.04311 -16.92562 -16.42041 -15.37761 -14.99772 -14.68477 -14.13860 -13.90514 -13.65522 -13.20862 -13.09783 -12.96574 -12.93573 -12.78546 -12.23546 -12.08641 -11.69361 -11.22799 -11.14800 -10.98038 -10.59966 -10.40879 -10.12762 -9.88125 -9.81336 -9.43008 -9.27978 -8.92938 -8.05537 -7.16008 -6.50758 -4.56811 1.34505 1.90804 2.90837 3.01302 3.02891 3.05007 3.06885 3.09892 4.00538 4.03190 4.23970 4.28227 4.81426 4.82629 5.14116 5.31153 5.34671 5.49166 5.63342 5.67123 5.75042 5.76959 5.82167 5.94508 6.03637 6.34223 6.50567 6.63616 6.65286 6.89190 7.04826 7.14415 7.54357 7.84799 8.10197 8.32518 8.64398 9.05593 10.60148 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.020282 B = 0.005909 C = 0.005607 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1380.207905 B = 4737.646002 C = 4992.764829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.256 3.744 3 N -0.486 5.486 4 C -0.003 4.003 5 C -0.035 4.035 6 C -0.153 4.153 7 C 0.176 3.824 8 O -0.293 6.293 9 C 0.177 3.823 10 H 0.050 0.950 11 C -0.525 4.525 12 H 0.093 0.907 13 C 0.086 3.914 14 N -0.870 5.870 15 Si 0.858 3.142 16 H -0.268 1.268 17 H -0.275 1.275 18 H -0.257 1.257 19 C -0.039 4.039 20 Cl -0.228 7.228 21 C -0.211 4.211 22 C 0.094 3.906 23 N -0.604 5.604 24 H 0.418 0.582 25 H 0.083 0.917 26 H 0.075 0.925 27 H 0.092 0.908 28 H 0.130 0.870 29 H 0.136 0.864 30 H 0.273 0.727 31 H 0.095 0.905 32 H 0.096 0.904 33 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.392 4.985 4.634 15.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.011 4.011 3 N -0.207 5.207 4 C -0.119 4.119 5 C -0.054 4.054 6 C -0.173 4.173 7 C 0.127 3.873 8 O -0.205 6.205 9 C 0.122 3.878 10 H 0.067 0.933 11 C -0.562 4.562 12 H 0.111 0.889 13 C -0.120 4.120 14 N -0.505 5.505 15 Si 0.683 3.317 16 H -0.193 1.193 17 H -0.201 1.201 18 H -0.181 1.181 19 C -0.102 4.102 20 Cl -0.202 7.202 21 C -0.234 4.234 22 C -0.015 4.015 23 N -0.217 5.217 24 H 0.256 0.744 25 H 0.101 0.899 26 H 0.094 0.906 27 H 0.111 0.889 28 H 0.148 0.852 29 H 0.153 0.847 30 H 0.084 0.916 31 H 0.113 0.887 32 H 0.115 0.885 33 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -13.420 5.833 4.592 15.336 hybrid contribution -0.742 -2.313 0.056 2.429 sum -14.161 3.521 4.648 15.315 Atomic orbital electron populations 1.20263 0.84786 1.04171 1.03742 1.23372 0.95302 0.81241 1.01177 1.70251 1.01143 1.27637 1.21669 1.18856 0.91742 0.90385 1.10939 1.19690 0.88488 0.99204 0.98040 1.19998 0.98251 0.91415 1.07648 1.18738 0.84964 0.91687 0.91890 1.86256 1.25157 1.22994 1.86124 1.20847 0.99822 0.75931 0.91249 0.93282 1.20734 1.02195 1.02949 1.30367 0.88946 1.24894 0.96379 0.96852 0.93857 1.69837 1.29421 1.18209 1.33027 0.87134 0.84280 0.80387 0.79915 1.19313 1.20066 1.18122 1.26037 0.88529 1.02061 0.93599 1.98674 1.51975 1.92535 1.77064 1.20001 0.88961 1.00298 1.14109 1.18486 0.84770 0.94838 1.03451 1.42952 1.05008 1.09520 1.64243 0.74403 0.89862 0.90636 0.88949 0.85180 0.84656 0.91618 0.88697 0.88548 0.85106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.58 10.51 36.01 0.38 -0.20 16 2 C 0.26 3.48 8.08 -154.76 -1.25 2.23 16 3 N -0.49 -8.15 11.28 -8.19 -0.09 -8.25 16 4 C 0.00 -0.05 7.23 -84.66 -0.61 -0.66 16 5 C -0.03 -0.57 10.04 -39.62 -0.40 -0.97 16 6 C -0.15 -2.63 9.90 -39.83 -0.39 -3.03 16 7 C 0.18 3.49 6.04 -39.19 -0.24 3.25 16 8 O -0.29 -6.45 9.69 -19.58 -0.19 -6.64 16 9 C 0.18 3.97 1.70 -27.88 -0.05 3.92 16 10 H 0.05 1.11 2.90 -51.93 -0.15 0.96 16 11 C -0.53 -13.68 9.24 -34.44 -0.32 -14.00 16 12 H 0.09 2.65 8.06 -52.49 -0.42 2.23 16 13 C 0.09 2.26 5.47 -17.82 -0.10 2.16 16 14 N -0.87 -24.20 13.96 55.43 0.77 -23.43 16 15 Si 0.86 18.95 26.37 -169.99 -4.48 14.47 16 16 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 17 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 18 H -0.26 -5.31 5.97 56.52 0.34 -4.97 16 19 C -0.04 -0.79 5.95 37.16 0.22 -0.57 16 20 Cl -0.23 -4.26 25.77 -51.86 -1.34 -5.59 16 21 C -0.21 -4.04 7.19 -39.35 -0.28 -4.32 16 22 C 0.09 1.67 7.30 -84.00 -0.61 1.06 16 23 N -0.60 -8.54 6.24 -7.99 -0.05 -8.59 16 24 H 0.42 4.58 8.96 -40.82 -0.37 4.21 16 25 H 0.08 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 27 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 28 H 0.13 1.79 8.06 -52.48 -0.42 1.36 16 29 H 0.14 2.05 8.06 -52.49 -0.42 1.63 16 30 H 0.27 7.05 8.31 -40.82 -0.34 6.72 16 31 H 0.09 1.85 6.91 -51.93 -0.36 1.49 16 32 H 0.10 1.86 8.14 -51.93 -0.42 1.43 16 33 H 0.13 2.57 5.06 -52.49 -0.27 2.30 16 LS Contribution 291.03 15.07 4.39 4.39 Total: -1.00 -30.14 291.03 -7.94 -38.08 By element: Atomic # 1 Polarization: 9.98 SS G_CDS: -3.30 Total: 6.68 kcal Atomic # 6 Polarization: -7.47 SS G_CDS: -3.65 Total: -11.12 kcal Atomic # 7 Polarization: -40.90 SS G_CDS: 0.63 Total: -40.27 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -0.19 Total: -6.64 kcal Atomic # 14 Polarization: 18.95 SS G_CDS: -4.48 Total: 14.47 kcal Atomic # 17 Polarization: -4.26 SS G_CDS: -1.34 Total: -5.59 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -30.14 -7.94 -38.08 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001228326081.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.189 kcal (2) G-P(sol) polarization free energy of solvation -30.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.078 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds