Wall clock time and date at job start Tue Mar 31 2020 02:00:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38498 * 119.90032 * 2 1 4 4 F 1.35093 * 119.95655 * 0.02562 * 3 2 1 5 5 C 1.38272 * 120.09278 * 179.97438 * 3 2 1 6 6 C 1.39295 * 119.90083 * 0.02562 * 5 3 2 7 7 C 1.48429 * 120.09220 * 180.02562 * 6 5 3 8 8 N 1.30759 * 126.41563 * 359.97438 * 7 6 5 9 9 O 1.21292 * 110.10181 * 179.97438 * 8 7 6 10 10 C 1.33669 * 110.02240 * 0.02562 * 9 8 7 11 11 C 1.50697 * 126.43367 * 179.97438 * 10 9 8 12 12 C 1.50700 * 109.47266 * 270.02279 * 11 10 9 13 13 H 1.07999 * 119.99988 * 0.02562 * 12 11 10 14 14 C 1.37885 * 120.00047 * 180.02562 * 12 11 10 15 15 N 1.31518 * 119.99792 * 359.72305 * 14 12 11 16 16 Si 1.86795 * 120.00009 * 180.02562 * 14 12 11 17 17 H 1.48503 * 109.47163 * 59.99902 * 16 14 12 18 18 H 1.48495 * 109.47159 * 179.97438 * 16 14 12 19 19 H 1.48505 * 109.47290 * 299.99897 * 16 14 12 20 20 N 1.30972 * 107.12596 * 0.22473 * 10 9 8 21 21 C 1.39296 * 119.81377 * 0.27728 * 6 5 3 22 22 C 1.38263 * 119.90088 * 359.42225 * 21 6 5 23 23 F 1.35101 * 119.95499 * 180.32092 * 22 21 6 24 24 H 1.09001 * 109.47260 * 90.00128 * 1 2 3 25 25 H 1.09003 * 109.47149 * 209.99859 * 1 2 3 26 26 H 1.09000 * 109.47466 * 330.00164 * 1 2 3 27 27 H 1.07994 * 120.04498 * 180.02562 * 5 3 2 28 28 H 1.09004 * 109.47205 * 150.02372 * 11 10 9 29 29 H 1.08997 * 109.47395 * 30.02865 * 11 10 9 30 30 H 0.97000 * 119.99468 * 179.97438 * 15 14 12 31 31 H 1.08001 * 120.05274 * 179.70683 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1974 1.2006 0.0000 4 9 1.5190 2.3689 0.0005 5 6 3.5801 1.2053 0.0005 6 6 4.2785 0.0001 0.0005 7 6 5.7628 0.0001 0.0017 8 7 6.5390 1.0524 0.0023 9 8 7.7031 0.7117 0.0037 10 6 7.7896 -0.6222 0.0036 11 6 9.0574 -1.4368 0.0045 12 6 9.4815 -1.7078 -1.4160 13 1 8.8921 -1.3276 -2.2373 14 6 10.6219 -2.4409 -1.6671 15 7 11.3426 -2.8992 -0.6669 16 14 11.1480 -2.7761 -3.4278 17 1 11.3886 -1.4879 -4.1263 18 1 12.3972 -3.5790 -3.4269 19 1 10.0767 -3.5274 -4.1301 20 7 6.5655 -1.0880 -0.0029 21 6 3.5801 -1.2051 -0.0059 22 6 2.1975 -1.2005 -0.0001 23 9 1.5190 -2.3688 0.0003 24 1 -0.3634 0.0000 -1.0277 25 1 -0.3633 -0.8900 0.5138 26 1 -0.3634 0.8900 0.5138 27 1 4.1176 2.1419 0.0010 28 1 8.8814 -2.3823 0.5177 29 1 9.8436 -0.8849 0.5195 30 1 12.1446 -3.4153 -0.8436 31 1 4.1177 -2.1418 -0.0107 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001247444495.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 02:00:47 Heat of formation + Delta-G solvation = -11.320323 kcal Electronic energy + Delta-G solvation = -20348.690761 eV Core-core repulsion = 16655.090439 eV Total energy + Delta-G solvation = -3693.600322 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 280.076 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.24214 -49.19191 -44.94680 -39.21014 -35.46869 -34.16523 -33.02907 -31.79136 -30.61222 -28.60233 -27.63944 -24.26851 -23.76121 -23.10536 -22.09257 -20.75930 -18.25394 -17.67014 -17.50386 -16.67053 -16.37869 -16.30266 -15.94067 -15.74335 -15.49583 -14.89083 -14.71311 -14.17207 -13.48984 -13.46898 -12.94105 -12.91631 -12.59603 -12.55230 -12.43383 -11.90794 -11.74867 -11.48552 -11.21489 -10.99904 -10.83317 -10.52337 -10.25224 -10.06588 -9.33942 -9.00828 -8.67080 -8.66925 -6.30976 -4.37477 0.37480 0.74126 1.83470 2.63473 3.22731 3.26928 3.29850 3.34403 3.39261 3.59774 3.86752 3.97933 4.27026 4.34487 4.38464 4.72130 4.86069 5.06781 5.08181 5.22378 5.23779 5.45530 5.58894 5.70376 5.73179 5.84677 6.04843 6.38106 6.43706 6.50360 7.02519 7.07996 7.61621 7.83717 8.62452 8.68151 9.28032 10.79274 Molecular weight = 280.08amu Principal moments of inertia in cm(-1) A = 0.026990 B = 0.003665 C = 0.003445 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1037.186544 B = 7638.325017 C = 8125.167477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.148 4.148 3 C 0.125 3.875 4 F -0.127 7.127 5 C -0.130 4.130 6 C 0.052 3.948 7 C 0.187 3.813 8 N -0.389 5.389 9 O 0.073 5.927 10 C 0.248 3.752 11 C 0.100 3.900 12 C -0.528 4.528 13 H 0.062 0.938 14 C 0.068 3.932 15 N -0.887 5.887 16 Si 0.907 3.093 17 H -0.273 1.273 18 H -0.283 1.283 19 H -0.274 1.274 20 N -0.496 5.496 21 C -0.118 4.118 22 C 0.126 3.874 23 F -0.125 7.125 24 H 0.079 0.921 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.151 0.849 28 H 0.071 0.929 29 H 0.061 0.939 30 H 0.269 0.731 31 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.149 5.220 2.365 18.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.150 4.150 3 C 0.105 3.895 4 F -0.105 7.105 5 C -0.150 4.150 6 C 0.050 3.950 7 C -0.082 4.082 8 N -0.099 5.099 9 O 0.014 5.986 10 C 0.030 3.970 11 C 0.061 3.939 12 C -0.567 4.567 13 H 0.080 0.920 14 C -0.136 4.136 15 N -0.524 5.524 16 Si 0.734 3.266 17 H -0.199 1.199 18 H -0.209 1.209 19 H -0.199 1.199 20 N -0.229 5.229 21 C -0.138 4.138 22 C 0.106 3.894 23 F -0.104 7.104 24 H 0.098 0.902 25 H 0.096 0.904 26 H 0.095 0.905 27 H 0.169 0.831 28 H 0.089 0.911 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -17.612 5.615 2.418 18.643 hybrid contribution 0.343 -0.264 -0.948 1.042 sum -17.270 5.351 1.470 18.139 Atomic orbital electron populations 1.20686 0.88862 1.03993 1.03444 1.19937 0.98130 0.90962 1.05981 1.16800 0.89001 0.80736 1.02938 1.91516 1.79881 1.45369 1.93768 1.21156 0.92081 0.99506 1.02303 1.16716 0.86432 0.92325 0.99532 1.23536 0.95531 0.85490 1.03686 1.74769 0.90029 1.23454 1.21681 1.85268 1.21156 1.26403 1.65801 1.30186 0.97851 0.80455 0.88493 1.18285 0.82172 0.93086 1.00330 1.20743 1.10010 1.35956 0.89943 0.92024 1.24920 0.95690 0.94833 0.98143 1.69909 1.16119 1.35255 1.31109 0.86400 0.78049 0.78622 0.83570 1.19866 1.20882 1.19898 1.72068 1.00035 1.27622 1.23206 1.21272 0.91854 1.00014 1.00680 1.16865 0.89126 0.80741 1.02625 1.91528 1.79833 1.45314 1.93690 0.90216 0.90410 0.90491 0.83140 0.91070 0.92093 0.92109 0.82341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.95 9.65 36.00 0.35 -0.61 16 2 C -0.15 -1.65 5.89 -104.43 -0.62 -2.27 16 3 C 0.12 1.49 7.23 -39.47 -0.29 1.20 16 4 F -0.13 -1.46 16.46 2.25 0.04 -1.42 16 5 C -0.13 -1.73 9.67 -39.18 -0.38 -2.11 16 6 C 0.05 0.80 5.87 -104.91 -0.62 0.18 16 7 C 0.19 3.51 7.80 -156.11 -1.22 2.30 16 8 N -0.39 -7.54 11.86 30.97 0.37 -7.17 16 9 O 0.07 1.49 11.29 18.04 0.20 1.70 16 10 C 0.25 5.32 7.69 -12.99 -0.10 5.22 16 11 C 0.10 2.34 5.60 -29.04 -0.16 2.17 16 12 C -0.53 -13.71 9.09 -34.44 -0.31 -14.02 16 13 H 0.06 1.61 7.74 -52.49 -0.41 1.21 16 14 C 0.07 1.78 5.46 -17.82 -0.10 1.68 16 15 N -0.89 -24.00 13.29 55.43 0.74 -23.26 16 16 Si 0.91 20.28 29.54 -169.99 -5.02 15.26 16 17 H -0.27 -6.05 7.11 56.52 0.40 -5.64 16 18 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 19 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 20 N -0.50 -10.33 11.26 -9.88 -0.11 -10.44 16 21 C -0.12 -1.64 9.68 -39.18 -0.38 -2.02 16 22 C 0.13 1.55 7.23 -39.48 -0.29 1.26 16 23 F -0.13 -1.51 16.46 2.25 0.04 -1.47 16 24 H 0.08 0.60 8.14 -51.93 -0.42 0.17 16 25 H 0.08 0.60 7.63 -51.93 -0.40 0.20 16 26 H 0.08 0.58 7.63 -51.93 -0.40 0.19 16 27 H 0.15 1.94 7.87 -52.49 -0.41 1.53 16 28 H 0.07 1.72 8.14 -51.93 -0.42 1.30 16 29 H 0.06 1.41 8.14 -51.93 -0.42 0.99 16 30 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 31 H 0.16 2.26 7.87 -52.49 -0.41 1.85 16 LS Contribution 293.81 15.07 4.43 4.43 Total: -1.00 -26.73 293.81 -5.85 -32.58 By element: Atomic # 1 Polarization: -0.77 SS G_CDS: -2.43 Total: -3.20 kcal Atomic # 6 Polarization: -2.90 SS G_CDS: -4.10 Total: -7.00 kcal Atomic # 7 Polarization: -41.86 SS G_CDS: 0.99 Total: -40.87 kcal Atomic # 8 Polarization: 1.49 SS G_CDS: 0.20 Total: 1.70 kcal Atomic # 9 Polarization: -2.97 SS G_CDS: 0.07 Total: -2.89 kcal Atomic # 14 Polarization: 20.28 SS G_CDS: -5.02 Total: 15.26 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -26.73 -5.85 -32.58 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001247444495.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.263 kcal (2) G-P(sol) polarization free energy of solvation -26.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.584 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds