Wall clock time and date at job start Tue Mar 31 2020 01:29:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.39343 * 126.22917 * 2 1 4 4 C 1.38829 * 133.24102 * 359.95821 * 3 2 1 5 5 C 1.38048 * 119.90883 * 179.70983 * 4 3 2 6 6 F 1.35102 * 119.97221 * 180.29327 * 5 4 3 7 7 C 1.39593 * 120.05539 * 0.58762 * 5 4 3 8 8 N 1.39403 * 119.94660 * 179.70678 * 7 5 4 9 9 C 1.34777 * 120.00226 * 154.84469 * 8 7 5 10 10 O 1.21806 * 119.99882 * 354.46497 * 9 8 7 11 11 C 1.41614 * 120.00046 * 174.19807 * 9 8 7 12 12 H 1.08003 * 119.99702 * 0.26932 * 11 9 8 13 13 C 1.40144 * 120.00117 * 180.27333 * 11 9 8 14 14 N 1.30635 * 119.99690 * 359.97438 * 13 11 9 15 15 Si 1.86795 * 120.00104 * 179.97438 * 13 11 9 16 16 H 1.48491 * 109.47226 * 359.97438 * 15 13 11 17 17 H 1.48505 * 109.47186 * 120.00076 * 15 13 11 18 18 H 1.48506 * 109.46991 * 239.99762 * 15 13 11 19 19 C 1.38958 * 120.10828 * 359.42733 * 7 5 4 20 20 C 1.38394 * 119.87872 * 0.27459 * 19 7 5 21 21 O 1.35593 * 132.91546 * 179.97438 * 20 19 7 22 22 C 1.34228 * 109.15480 * 180.02562 * 21 20 19 23 23 O 1.21598 * 125.24254 * 179.97438 * 22 21 20 24 24 H 1.08996 * 109.46963 * 89.99787 * 1 2 3 25 25 H 1.09001 * 109.47085 * 210.00242 * 1 2 3 26 26 H 1.09004 * 109.46974 * 329.99478 * 1 2 3 27 27 H 1.08000 * 120.04235 * 0.02562 * 4 3 2 28 28 H 0.97002 * 120.00246 * 334.83930 * 8 7 5 29 29 H 0.96995 * 119.99612 * 180.02562 * 14 13 11 30 30 H 1.07997 * 120.05873 * 180.25378 * 19 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2886 1.1240 0.0000 4 6 2.0349 2.4889 -0.0007 5 6 3.0855 3.3844 0.0056 6 9 2.8401 4.7129 0.0108 7 6 4.4014 2.9183 0.0003 8 7 5.4606 3.8246 0.0004 9 6 6.6609 3.4582 0.4920 10 8 6.7941 2.3722 1.0273 11 6 7.7686 4.3335 0.3810 12 1 7.6504 5.2965 -0.0936 13 6 9.0180 3.9502 0.8870 14 7 9.1607 2.7857 1.4614 15 14 10.4793 5.1045 0.7400 16 1 10.0577 6.3518 0.0532 17 1 10.9888 5.4332 2.0956 18 1 11.5533 4.4458 -0.0462 19 6 4.6571 1.5525 0.0007 20 6 3.6045 0.6540 0.0006 21 8 3.5469 -0.7007 0.0004 22 6 2.2614 -1.0870 -0.0002 23 8 1.8752 -2.2400 -0.0009 24 1 -0.3633 0.0000 -1.0276 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3633 0.8900 0.5139 27 1 1.0169 2.8497 -0.0011 28 1 5.3339 4.7189 -0.3532 29 1 10.0254 2.5206 1.8119 30 1 5.6754 1.1928 0.0007 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001468837506.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:29:05 Heat of formation + Delta-G solvation = -88.380193 kcal Electronic energy + Delta-G solvation = -21230.145139 eV Core-core repulsion = 17520.830461 eV Total energy + Delta-G solvation = -3709.314678 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 280.069 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.66100 -43.02919 -39.08241 -37.76645 -36.90308 -35.60675 -33.39741 -32.55734 -30.13740 -29.05330 -27.77170 -26.34641 -23.29665 -22.85613 -21.66142 -20.40781 -18.72629 -18.41429 -17.34444 -17.13232 -16.75402 -15.76965 -15.64551 -15.41135 -15.36328 -15.00623 -14.36093 -14.21493 -14.00184 -13.69846 -13.16591 -12.86530 -12.80054 -12.71228 -12.47180 -11.78568 -11.57051 -11.41682 -11.25682 -10.88059 -10.79689 -10.54012 -10.40875 -9.25986 -8.95653 -8.49384 -7.88831 -7.14585 -6.53863 -5.08445 1.17393 1.30376 2.18512 2.57696 2.93795 2.96684 3.06298 3.10649 3.59370 3.85289 4.23010 4.27295 4.30521 4.55685 4.60575 5.07130 5.11049 5.28844 5.32103 5.40813 5.51235 5.78203 5.86225 6.13543 6.34629 6.56024 6.72779 7.09363 7.32156 7.55523 7.73498 7.76521 7.88409 8.63889 8.99526 10.17138 10.36237 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.028422 B = 0.004620 C = 0.004017 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 984.905650 B = 6059.025568 C = 6969.336993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.103 3.897 2 N -0.546 5.546 3 C 0.035 3.965 4 C -0.109 4.109 5 C 0.052 3.948 6 F -0.133 7.133 7 C 0.190 3.810 8 N -0.683 5.683 9 C 0.537 3.463 10 O -0.561 6.561 11 C -0.530 4.530 12 H 0.074 0.926 13 C 0.087 3.913 14 N -0.741 5.741 15 Si 0.916 3.084 16 H -0.261 1.261 17 H -0.273 1.273 18 H -0.273 1.273 19 C -0.085 4.085 20 C 0.058 3.942 21 O -0.231 6.231 22 C 0.634 3.366 23 O -0.501 6.501 24 H 0.071 0.929 25 H 0.087 0.913 26 H 0.084 0.916 27 H 0.141 0.859 28 H 0.401 0.599 29 H 0.276 0.724 30 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.588 1.954 -3.628 13.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.037 4.037 2 N -0.279 5.279 3 C -0.064 4.064 4 C -0.132 4.132 5 C 0.028 3.972 6 F -0.112 7.112 7 C 0.086 3.914 8 N -0.325 5.325 9 C 0.348 3.652 10 O -0.445 6.445 11 C -0.565 4.565 12 H 0.093 0.907 13 C -0.138 4.138 14 N -0.367 5.367 15 Si 0.740 3.260 16 H -0.184 1.184 17 H -0.198 1.198 18 H -0.198 1.198 19 C -0.107 4.107 20 C 0.011 3.989 21 O -0.136 6.136 22 C 0.390 3.610 23 O -0.386 6.386 24 H 0.089 0.911 25 H 0.106 0.894 26 H 0.103 0.897 27 H 0.159 0.841 28 H 0.235 0.765 29 H 0.087 0.913 30 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -12.321 0.308 -3.143 12.720 hybrid contribution 0.336 1.250 -0.168 1.305 sum -11.985 1.558 -3.311 12.531 Atomic orbital electron populations 1.21728 0.74274 1.04441 1.03253 1.45436 1.07825 1.04781 1.69901 1.17924 0.88875 0.88988 1.10567 1.19371 0.99081 0.88294 1.06407 1.16907 0.91668 0.77646 1.10933 1.91462 1.94877 1.30317 1.94562 1.17503 0.86736 0.90094 0.97052 1.44253 1.10365 1.14598 1.63265 1.17132 0.80438 0.88443 0.79217 1.90632 1.82311 1.24142 1.47455 1.20057 0.93117 1.03933 1.39356 0.90734 1.25791 1.00003 0.95169 0.92789 1.69996 1.24697 1.17958 1.24094 0.86164 0.80372 0.80645 0.78837 1.18435 1.19809 1.19780 1.20341 0.99960 0.88469 1.01964 1.18826 0.93609 0.80232 1.06201 1.85007 1.27270 1.21232 1.80084 1.18506 0.78719 0.85254 0.78550 1.91109 1.74424 1.16269 1.56786 0.91079 0.89394 0.89683 0.84124 0.76455 0.91340 0.80224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.92 11.06 59.85 0.66 1.58 16 2 N -0.55 -7.65 3.20 -126.33 -0.40 -8.05 16 3 C 0.03 0.52 6.85 -83.67 -0.57 -0.05 16 4 C -0.11 -1.48 10.00 -39.43 -0.39 -1.87 16 5 C 0.05 0.83 7.31 -39.15 -0.29 0.54 16 6 F -0.13 -2.02 16.80 2.25 0.04 -1.98 16 7 C 0.19 3.62 6.44 -83.64 -0.54 3.08 16 8 N -0.68 -14.13 5.27 -12.38 -0.07 -14.20 16 9 C 0.54 13.75 7.36 -14.97 -0.11 13.64 16 10 O -0.56 -16.19 12.02 5.09 0.06 -16.13 16 11 C -0.53 -13.44 9.31 -37.58 -0.35 -13.79 16 12 H 0.07 1.71 7.85 -52.48 -0.41 1.30 16 13 C 0.09 2.18 5.50 -17.35 -0.10 2.09 16 14 N -0.74 -20.18 11.73 55.56 0.65 -19.53 16 15 Si 0.92 18.26 29.56 -169.99 -5.02 13.24 16 16 H -0.26 -5.01 7.11 56.52 0.40 -4.61 16 17 H -0.27 -5.38 7.11 56.52 0.40 -4.97 16 18 H -0.27 -5.36 7.11 56.52 0.40 -4.96 16 19 C -0.09 -1.70 8.72 -39.26 -0.34 -2.05 16 20 C 0.06 1.06 7.35 -38.97 -0.29 0.77 16 21 O -0.23 -4.35 10.72 -22.09 -0.24 -4.59 16 22 C 0.63 10.97 9.06 54.04 0.49 11.46 16 23 O -0.50 -9.51 17.80 -19.01 -0.34 -9.85 16 24 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 25 H 0.09 0.74 8.06 -51.93 -0.42 0.32 16 26 H 0.08 0.56 8.14 -51.93 -0.42 0.13 16 27 H 0.14 1.41 8.06 -52.49 -0.42 0.98 16 28 H 0.40 7.17 8.40 -40.82 -0.34 6.83 16 29 H 0.28 6.77 8.29 -40.82 -0.34 6.43 16 30 H 0.18 4.18 5.77 -52.49 -0.30 3.87 16 LS Contribution 280.10 15.07 4.22 4.22 Total: -1.00 -31.25 280.10 -4.80 -36.05 By element: Atomic # 1 Polarization: 7.30 SS G_CDS: -1.88 Total: 5.42 kcal Atomic # 6 Polarization: 17.23 SS G_CDS: -1.82 Total: 15.41 kcal Atomic # 7 Polarization: -41.96 SS G_CDS: 0.18 Total: -41.78 kcal Atomic # 8 Polarization: -30.05 SS G_CDS: -0.51 Total: -30.57 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 0.04 Total: -1.98 kcal Atomic # 14 Polarization: 18.26 SS G_CDS: -5.02 Total: 13.24 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -31.25 -4.80 -36.05 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001468837506.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.332 kcal (2) G-P(sol) polarization free energy of solvation -31.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.048 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds