Wall clock time and date at job start Tue Mar 31 2020 00:59:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08998 * 109.47365 * 2 1 4 4 C 1.50707 * 109.46888 * 119.99265 * 2 1 3 5 5 H 1.07999 * 119.99813 * 119.99822 * 4 2 1 6 6 C 1.37876 * 119.99932 * 300.00209 * 4 2 1 7 7 N 1.31509 * 120.00513 * 359.97438 * 6 4 2 8 8 Si 1.86805 * 119.99389 * 179.97438 * 6 4 2 9 9 H 1.48498 * 109.46918 * 90.00245 * 8 6 4 10 10 H 1.48497 * 109.46802 * 209.99545 * 8 6 4 11 11 H 1.48497 * 109.47400 * 329.99650 * 8 6 4 12 12 N 1.46494 * 109.46991 * 239.99412 * 2 1 3 13 13 C 1.34775 * 120.00166 * 85.00250 * 12 2 1 14 14 O 1.21670 * 119.99691 * 359.97438 * 13 12 2 15 15 C 1.46652 * 119.99920 * 179.97438 * 13 12 2 16 16 C 1.34635 * 119.99578 * 186.73417 * 15 13 12 17 17 C 1.47407 * 120.00255 * 11.47384 * 16 15 13 18 18 C 1.40180 * 120.94354 * 46.08802 * 17 16 15 19 19 C 1.37938 * 119.00147 * 179.97438 * 18 17 16 20 20 N 1.31915 * 120.94912 * 0.02562 * 19 18 17 21 21 C 1.31959 * 122.09248 * 0.02562 * 20 19 18 22 22 Cl 1.73603 * 119.55585 * 180.02562 * 21 20 19 23 23 C 1.38203 * 120.88641 * 359.73218 * 21 20 19 24 24 H 1.08997 * 109.47439 * 180.02562 * 1 2 3 25 25 H 1.09005 * 109.46906 * 59.99977 * 1 2 3 26 26 H 1.09008 * 109.46802 * 300.00789 * 1 2 3 27 27 H 0.96999 * 120.00346 * 180.02562 * 7 6 4 28 28 H 0.96997 * 119.99963 * 265.00182 * 12 2 1 29 29 H 1.07996 * 120.00525 * 6.73430 * 15 13 12 30 30 H 1.08006 * 119.99911 * 191.47729 * 16 15 13 31 31 H 1.08002 * 120.49928 * 359.95692 * 18 17 16 32 32 H 1.08004 * 119.52874 * 179.97438 * 19 18 17 33 33 H 1.08002 * 120.52328 * 180.26529 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7103 1.2306 5 1 2.6532 -1.5884 1.1316 6 6 1.6992 -0.2391 2.4828 7 7 0.9435 0.8304 2.6034 8 14 2.3213 -1.1200 4.0081 9 1 3.6295 -0.5455 4.4125 10 1 1.3430 -0.9488 5.1121 11 1 2.4857 -2.5659 3.7122 12 7 2.0183 -0.6907 -1.1961 13 6 2.1471 -0.0185 -2.3571 14 8 1.8573 1.1619 -2.4119 15 6 2.6364 -0.7099 -3.5543 16 6 2.8941 -0.0121 -4.6765 17 6 2.9306 1.4610 -4.6364 18 6 3.6233 2.1375 -3.6227 19 6 3.6317 3.5169 -3.6242 20 7 3.0000 4.1981 -4.5607 21 6 2.3350 3.6029 -5.5327 22 17 1.5277 4.5644 -6.7317 23 6 2.2775 2.2244 -5.6123 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 0.5140 0.8900 27 1 0.7094 1.1621 3.4843 28 1 2.2490 -1.6318 -1.1524 29 1 2.7901 -1.7787 -3.5358 30 1 3.0740 -0.5316 -5.6061 31 1 4.1424 1.5871 -2.8520 32 1 4.1624 4.0468 -2.8470 33 1 1.7350 1.7433 -6.4128 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000255677236.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 00:59:09 Heat of formation + Delta-G solvation = 12.386026 kcal Electronic energy + Delta-G solvation = -18924.228331 eV Core-core repulsion = 15783.452674 eV Total energy + Delta-G solvation = -3140.775657 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 280.072 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.20700 -38.86502 -36.55626 -35.24344 -34.07417 -32.48966 -31.03082 -30.66011 -28.84906 -25.33011 -24.57361 -23.38542 -22.26625 -20.23277 -19.32299 -17.75212 -16.56854 -16.20577 -15.87752 -15.73276 -15.13376 -14.49819 -14.25928 -14.10595 -13.81594 -13.62088 -13.05428 -12.49974 -12.33104 -11.85829 -11.76418 -11.61336 -11.26464 -11.12441 -11.03431 -10.84389 -10.41766 -10.31164 -10.26851 -9.53480 -9.32869 -9.12586 -8.95763 -8.60263 -8.39185 -7.94237 -6.17684 -4.27771 0.72251 1.17907 1.83847 1.95754 3.20649 3.27700 3.29129 3.79998 3.86052 4.03465 4.33525 4.46867 4.70375 5.04453 5.08264 5.14704 5.19663 5.36923 5.50034 5.70180 5.80583 6.04664 6.17782 6.42200 6.64566 6.76862 6.90396 7.08577 7.36228 7.48942 7.63139 7.84382 7.89644 8.08674 8.56674 8.70793 9.01504 9.40098 10.88125 Molecular weight = 280.07amu Principal moments of inertia in cm(-1) A = 0.028797 B = 0.003838 C = 0.003669 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 972.087519 B = 7294.394952 C = 7630.324029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.264 3.736 3 H 0.050 0.950 4 C -0.537 4.537 5 H 0.061 0.939 6 C 0.067 3.933 7 N -0.882 5.882 8 Si 0.901 3.099 9 H -0.279 1.279 10 H -0.285 1.285 11 H -0.274 1.274 12 N -0.697 5.697 13 C 0.517 3.483 14 O -0.544 6.544 15 C -0.171 4.171 16 C -0.063 4.063 17 C 0.005 3.995 18 C -0.089 4.089 19 C 0.109 3.891 20 N -0.480 5.480 21 C 0.167 3.833 22 Cl -0.048 7.048 23 C -0.144 4.144 24 H 0.026 0.974 25 H 0.014 0.986 26 H 0.090 0.910 27 H 0.265 0.735 28 H 0.390 0.610 29 H 0.135 0.865 30 H 0.140 0.860 31 H 0.135 0.865 32 H 0.162 0.838 33 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.756 -1.745 -15.265 16.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.163 3.837 3 H 0.068 0.932 4 C -0.575 4.575 5 H 0.079 0.921 6 C -0.136 4.136 7 N -0.519 5.519 8 Si 0.729 3.271 9 H -0.205 1.205 10 H -0.210 1.210 11 H -0.198 1.198 12 N -0.344 5.344 13 C 0.303 3.697 14 O -0.425 6.425 15 C -0.193 4.193 16 C -0.083 4.083 17 C -0.003 4.003 18 C -0.109 4.109 19 C -0.046 4.046 20 N -0.191 5.191 21 C 0.002 3.998 22 Cl -0.019 7.019 23 C -0.165 4.165 24 H 0.045 0.955 25 H 0.033 0.967 26 H 0.109 0.891 27 H 0.075 0.925 28 H 0.222 0.778 29 H 0.152 0.848 30 H 0.158 0.842 31 H 0.153 0.847 32 H 0.179 0.821 33 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.393 0.214 -15.159 15.784 hybrid contribution 0.119 -1.840 0.893 2.049 sum 4.512 -1.626 -14.266 15.050 Atomic orbital electron populations 1.22071 0.98385 0.99101 1.00948 1.18766 0.91073 0.93979 0.79926 0.93248 1.21202 1.32649 1.13329 0.90314 0.92072 1.24885 0.94725 0.94936 0.99080 1.69897 1.35665 1.22389 1.23980 0.86450 0.78641 0.79830 0.82195 1.20515 1.21036 1.19843 1.46564 1.63703 1.13611 1.10485 1.18472 0.79984 0.87238 0.83961 1.90838 1.51557 1.15359 1.84756 1.23446 1.00956 1.00824 0.94056 1.22129 0.96924 0.91313 0.97892 1.19128 0.94614 0.93443 0.93105 1.22202 0.97360 0.95476 0.95848 1.22400 0.95930 0.91201 0.95073 1.66779 1.08005 1.41925 1.02413 1.21274 0.97591 0.88306 0.92654 1.98374 1.77086 1.73419 1.53071 1.21762 1.01958 0.92074 1.00756 0.95497 0.96662 0.89138 0.92502 0.77802 0.84765 0.84230 0.84669 0.82068 0.84244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.58 9.26 37.16 0.34 -3.24 16 2 C 0.26 6.46 2.56 -69.08 -0.18 6.29 16 3 H 0.05 1.40 7.58 -51.93 -0.39 1.00 16 4 C -0.54 -13.76 8.73 -34.44 -0.30 -14.06 16 5 H 0.06 1.49 7.74 -52.49 -0.41 1.09 16 6 C 0.07 1.77 5.30 -17.82 -0.09 1.67 16 7 N -0.88 -24.44 11.32 55.43 0.63 -23.81 16 8 Si 0.90 20.17 29.54 -169.99 -5.02 15.15 16 9 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 10 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 11 H -0.27 -5.97 7.11 56.52 0.40 -5.57 16 12 N -0.70 -13.53 5.06 -56.26 -0.28 -13.82 16 13 C 0.52 9.37 6.89 -12.87 -0.09 9.28 16 14 O -0.54 -11.73 12.03 5.22 0.06 -11.67 16 15 C -0.17 -2.17 9.95 -37.46 -0.37 -2.54 16 16 C -0.06 -0.71 9.85 -37.13 -0.37 -1.08 16 17 C 0.01 0.08 4.43 -104.75 -0.46 -0.39 16 18 C -0.09 -1.35 6.82 -38.96 -0.27 -1.61 16 19 C 0.11 1.68 11.17 -17.63 -0.20 1.48 16 20 N -0.48 -7.91 10.31 -10.45 -0.11 -8.02 16 21 C 0.17 2.53 7.27 -17.51 -0.13 2.40 16 22 Cl -0.05 -0.63 29.10 -51.86 -1.51 -2.14 16 23 C -0.14 -1.97 9.67 -38.91 -0.38 -2.35 16 24 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 25 H 0.01 0.35 8.14 -51.93 -0.42 -0.07 16 26 H 0.09 2.42 6.07 -51.92 -0.32 2.11 16 27 H 0.26 6.98 8.31 -40.82 -0.34 6.64 16 28 H 0.39 6.45 8.52 -40.82 -0.35 6.10 16 29 H 0.13 1.24 8.06 -52.49 -0.42 0.81 16 30 H 0.14 1.05 8.06 -52.48 -0.42 0.63 16 31 H 0.14 2.02 7.37 -52.49 -0.39 1.64 16 32 H 0.16 2.10 8.06 -52.48 -0.42 1.68 16 33 H 0.14 1.52 8.06 -52.49 -0.42 1.09 16 LS Contribution 304.70 15.07 4.59 4.59 Total: -1.00 -30.69 304.70 -7.65 -38.33 By element: Atomic # 1 Polarization: 9.05 SS G_CDS: -3.52 Total: 5.52 kcal Atomic # 6 Polarization: -1.66 SS G_CDS: -2.49 Total: -4.15 kcal Atomic # 7 Polarization: -45.88 SS G_CDS: 0.23 Total: -45.64 kcal Atomic # 8 Polarization: -11.73 SS G_CDS: 0.06 Total: -11.67 kcal Atomic # 14 Polarization: 20.17 SS G_CDS: -5.02 Total: 15.15 kcal Atomic # 17 Polarization: -0.63 SS G_CDS: -1.51 Total: -2.14 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -30.69 -7.65 -38.33 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000255677236.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.720 kcal (2) G-P(sol) polarization free energy of solvation -30.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.648 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.334 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds