Wall clock time and date at job start Tue Mar 31 2020 01:56:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 O 1.21222 * 119.99876 * 2 1 4 4 C 1.47424 * 119.99857 * 180.02562 * 2 1 3 5 5 C 1.39884 * 119.99730 * 179.97438 * 4 2 1 6 6 C 1.37662 * 120.05068 * 180.25328 * 5 4 2 7 7 C 1.39692 * 120.05541 * 359.44854 * 6 5 4 8 8 C 1.47805 * 120.00111 * 180.25627 * 7 6 5 9 9 O 1.21455 * 120.00512 * 180.29152 * 8 7 6 10 10 O 1.34706 * 119.99868 * 0.29535 * 8 7 6 11 11 C 1.45207 * 117.00133 * 179.97438 * 10 8 7 12 12 C 1.52995 * 109.46912 * 179.97438 * 11 10 8 13 13 C 1.50698 * 109.46952 * 179.97438 * 12 11 10 14 14 H 1.08006 * 120.00024 * 0.02562 * 13 12 11 15 15 C 1.37873 * 120.00357 * 179.97438 * 13 12 11 16 16 N 1.31513 * 120.00177 * 0.02562 * 15 13 12 17 17 Si 1.86800 * 120.00473 * 180.02562 * 15 13 12 18 18 H 1.48503 * 109.47104 * 60.00250 * 17 15 13 19 19 H 1.48498 * 109.47390 * 180.02562 * 17 15 13 20 20 H 1.48504 * 109.47063 * 300.00364 * 17 15 13 21 21 C 1.39837 * 120.00332 * 0.54781 * 7 6 5 22 22 F 1.35096 * 120.03162 * 179.75253 * 21 7 6 23 23 C 1.38163 * 119.94503 * 359.72879 * 21 7 6 24 24 H 1.09006 * 109.46497 * 269.99499 * 1 2 3 25 25 H 1.08994 * 109.47240 * 29.99748 * 1 2 3 26 26 H 1.08997 * 109.47302 * 150.00079 * 1 2 3 27 27 H 1.08002 * 119.97151 * 359.96867 * 5 4 2 28 28 H 1.07998 * 119.96641 * 179.72212 * 6 5 4 29 29 H 1.08999 * 109.46816 * 300.00043 * 11 10 8 30 30 H 1.09001 * 109.46762 * 59.99983 * 11 10 8 31 31 H 1.08999 * 109.47760 * 299.99888 * 12 11 10 32 32 H 1.08993 * 109.47224 * 60.00314 * 12 11 10 33 33 H 0.97001 * 120.00865 * 179.97438 * 16 15 13 34 34 H 1.07996 * 120.02823 * 180.02562 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1131 1.0498 0.0000 4 6 2.2441 -1.2767 -0.0006 5 6 3.6430 -1.2767 -0.0011 6 6 4.3324 -2.4683 -0.0069 7 6 3.6362 -3.6794 -0.0006 8 6 4.3777 -4.9580 -0.0011 9 8 3.7725 -6.0110 -0.0010 10 8 5.7247 -4.9554 -0.0017 11 6 6.3864 -6.2480 -0.0016 12 6 7.9028 -6.0445 -0.0028 13 6 8.5896 -7.3859 -0.0021 14 1 8.0031 -8.2929 -0.0013 15 6 9.9665 -7.4555 -0.0036 16 7 10.6808 -6.3512 -0.0051 17 14 10.8178 -9.1182 -0.0034 18 1 10.4190 -9.8787 -1.2150 19 1 12.2896 -8.9208 -0.0045 20 1 10.4216 -9.8771 1.2100 21 6 2.2379 -3.6821 0.0000 22 9 1.5640 -4.8530 0.0010 23 6 1.5458 -2.4863 0.0000 24 1 -0.3632 -0.0001 1.0278 25 1 -0.3633 0.8899 -0.5138 26 1 -0.3634 -0.8900 -0.5138 27 1 4.1825 -0.3411 -0.0016 28 1 5.4123 -2.4666 -0.0119 29 1 6.0949 -6.8052 0.8887 30 1 6.0942 -6.8057 -0.8913 31 1 8.1940 -5.4874 -0.8933 32 1 8.1953 -5.4866 0.8866 33 1 11.6495 -6.4000 -0.0057 34 1 0.4659 -2.4868 0.0009 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000777205221.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:56:41 Heat of formation + Delta-G solvation = -150.535062 kcal Electronic energy + Delta-G solvation = -20426.168653 eV Core-core repulsion = 16817.699081 eV Total energy + Delta-G solvation = -3608.469572 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 280.094 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -49.13142 -40.55847 -39.87490 -38.21326 -36.17734 -33.43196 -32.79060 -31.01676 -30.45576 -29.82546 -25.86953 -24.72300 -23.04864 -21.67257 -20.88139 -20.37545 -18.24365 -17.51395 -16.93531 -16.47636 -16.31190 -16.05830 -15.82523 -15.66465 -15.32923 -15.02043 -14.69529 -14.49949 -13.79563 -13.42691 -13.15981 -12.80568 -12.69409 -12.51442 -12.39245 -12.35067 -11.94542 -11.30494 -11.11942 -10.79068 -10.77030 -10.44649 -10.23907 -9.75140 -9.69399 -9.59096 -9.36228 -9.19065 -8.47469 -6.13724 -4.18448 -0.21703 0.74291 1.63854 2.61506 2.84664 3.28367 3.32518 3.34128 3.35596 3.41713 3.80712 4.15464 4.35252 4.54078 4.55756 4.68664 4.79401 4.92481 4.96241 5.17326 5.22976 5.42916 5.47259 5.61359 5.73808 5.85734 5.99925 6.02250 6.28241 6.56222 6.79881 6.98077 7.49303 7.56548 7.80872 8.02224 8.19293 8.86676 9.46223 10.97712 Molecular weight = 280.09amu Principal moments of inertia in cm(-1) A = 0.034540 B = 0.003061 C = 0.002819 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 810.448123 B = 9146.121378 C = 9930.819423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.397 3.603 3 O -0.446 6.446 4 C -0.119 4.119 5 C -0.087 4.087 6 C -0.043 4.043 7 C -0.124 4.124 8 C 0.495 3.505 9 O -0.496 6.496 10 O -0.349 6.349 11 C 0.076 3.924 12 C 0.025 3.975 13 C -0.528 4.528 14 H 0.059 0.941 15 C 0.062 3.938 16 N -0.890 5.890 17 Si 0.900 3.100 18 H -0.275 1.275 19 H -0.285 1.285 20 H -0.275 1.275 21 C 0.149 3.851 22 F -0.111 7.111 23 C -0.126 4.126 24 H 0.101 0.899 25 H 0.091 0.909 26 H 0.089 0.911 27 H 0.150 0.850 28 H 0.161 0.839 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.029 0.971 32 H 0.029 0.971 33 H 0.264 0.736 34 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.036 12.393 0.057 23.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.259 4.259 2 C 0.274 3.726 3 O -0.320 6.320 4 C -0.120 4.120 5 C -0.105 4.105 6 C -0.061 4.061 7 C -0.126 4.126 8 C 0.338 3.662 9 O -0.385 6.385 10 O -0.265 6.265 11 C 0.004 3.996 12 C -0.012 4.012 13 C -0.566 4.566 14 H 0.077 0.923 15 C -0.141 4.141 16 N -0.528 5.528 17 Si 0.728 3.272 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.200 1.200 21 C 0.129 3.871 22 F -0.089 7.089 23 C -0.145 4.145 24 H 0.120 0.880 25 H 0.110 0.890 26 H 0.108 0.892 27 H 0.167 0.833 28 H 0.178 0.822 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.047 0.953 32 H 0.047 0.953 33 H 0.074 0.926 34 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -19.683 12.621 0.054 23.381 hybrid contribution 0.373 -1.423 0.007 1.471 sum -19.310 11.197 0.061 22.322 Atomic orbital electron populations 1.22266 0.93122 1.05328 1.05185 1.22548 0.91866 0.87123 0.71081 1.90567 1.72117 1.33946 1.35394 1.20574 0.94664 0.94376 1.02377 1.21502 0.92845 0.99271 0.96887 1.21546 1.02069 0.89642 0.92802 1.19683 0.91679 0.93637 1.07620 1.20806 0.82735 0.88365 0.74261 1.90869 1.69865 1.32904 1.44877 1.86556 1.18183 1.39204 1.82560 1.23752 0.95437 0.79190 1.01261 1.19175 0.84745 0.98296 0.98958 1.20927 0.91477 0.91749 1.52490 0.92259 1.24974 0.97352 0.96970 0.94781 1.69954 1.06260 1.27027 1.49582 0.86521 0.78272 0.83627 0.78820 1.20035 1.21096 1.20039 1.17538 0.88315 0.82113 0.99109 1.91631 1.79397 1.45040 1.92792 1.21351 1.01283 0.89717 1.02125 0.88018 0.88990 0.89247 0.83278 0.82168 0.92010 0.92016 0.95257 0.95260 0.92594 0.82828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.84 9.75 36.01 0.35 -0.49 16 2 C 0.40 3.16 7.23 -30.57 -0.22 2.94 16 3 O -0.45 -5.02 17.08 5.61 0.10 -4.92 16 4 C -0.12 -1.03 5.87 -105.01 -0.62 -1.65 16 5 C -0.09 -0.84 9.58 -39.18 -0.38 -1.21 16 6 C -0.04 -0.48 9.59 -39.25 -0.38 -0.86 16 7 C -0.12 -1.70 5.88 -104.84 -0.62 -2.32 16 8 C 0.50 8.84 7.90 34.64 0.27 9.11 16 9 O -0.50 -10.08 15.11 -19.23 -0.29 -10.38 16 10 O -0.35 -6.78 9.46 -40.51 -0.38 -7.16 16 11 C 0.08 1.66 5.41 37.16 0.20 1.86 16 12 C 0.03 0.65 5.35 -27.89 -0.15 0.50 16 13 C -0.53 -14.69 9.11 -34.44 -0.31 -15.00 16 14 H 0.06 1.59 7.74 -52.48 -0.41 1.19 16 15 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 16 N -0.89 -26.08 13.29 55.43 0.74 -25.34 16 17 Si 0.90 21.24 29.54 -169.99 -5.02 16.22 16 18 H -0.27 -6.38 7.11 56.52 0.40 -5.97 16 19 H -0.29 -6.64 7.11 56.52 0.40 -6.23 16 20 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 21 C 0.15 1.81 7.27 -39.01 -0.28 1.52 16 22 F -0.11 -1.56 15.52 2.25 0.03 -1.52 16 23 C -0.13 -1.06 9.33 -39.08 -0.36 -1.42 16 24 H 0.10 0.29 8.14 -51.93 -0.42 -0.13 16 25 H 0.09 0.36 8.14 -51.93 -0.42 -0.06 16 26 H 0.09 0.22 6.46 -51.93 -0.34 -0.11 16 27 H 0.15 1.28 7.63 -52.49 -0.40 0.88 16 28 H 0.16 1.75 7.60 -52.49 -0.40 1.35 16 29 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 30 H 0.06 1.34 8.14 -51.93 -0.42 0.91 16 31 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 32 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 33 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 34 H 0.15 0.77 6.34 -52.49 -0.33 0.44 16 LS Contribution 311.98 15.07 4.70 4.70 Total: -1.00 -32.67 311.98 -6.26 -38.93 By element: Atomic # 1 Polarization: -1.59 SS G_CDS: -3.54 Total: -5.14 kcal Atomic # 6 Polarization: -2.80 SS G_CDS: -2.59 Total: -5.39 kcal Atomic # 7 Polarization: -26.08 SS G_CDS: 0.74 Total: -25.34 kcal Atomic # 8 Polarization: -21.88 SS G_CDS: -0.58 Total: -22.46 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 0.03 Total: -1.52 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -5.02 Total: 16.22 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -32.67 -6.26 -38.93 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000777205221.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.609 kcal (2) G-P(sol) polarization free energy of solvation -32.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.926 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds