Wall clock time and date at job start Tue Mar 31 2020 01:53:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34946 * 126.04261 * 2 1 4 4 C 1.35315 * 107.74887 * 180.15181 * 3 2 1 5 5 C 1.50699 * 126.04126 * 179.87506 * 4 3 2 6 6 C 1.52997 * 109.47078 * 299.71466 * 5 4 3 7 7 C 1.53006 * 109.46866 * 59.71289 * 5 4 3 8 8 N 1.46894 * 109.46922 * 179.71135 * 5 4 3 9 9 C 1.46902 * 110.99995 * 180.02562 * 8 5 4 10 10 C 1.50703 * 109.47407 * 180.02562 * 9 8 5 11 11 O 1.21280 * 120.00053 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99646 * 180.02562 * 10 9 8 13 13 C 1.46507 * 119.99451 * 180.02562 * 12 10 9 14 14 C 1.50692 * 109.46735 * 180.02562 * 13 12 10 15 15 H 1.07999 * 120.00714 * 0.02562 * 14 13 12 16 16 C 1.37882 * 119.99652 * 180.02562 * 14 13 12 17 17 N 1.31508 * 120.00174 * 0.02562 * 16 14 13 18 18 Si 1.86800 * 119.99981 * 179.97438 * 16 14 13 19 19 H 1.48505 * 109.46968 * 0.02562 * 18 16 14 20 20 H 1.48501 * 109.47326 * 119.99625 * 18 16 14 21 21 H 1.48499 * 109.47378 * 240.00050 * 18 16 14 22 22 C 1.39872 * 107.91599 * 359.60825 * 4 3 2 23 23 N 1.30837 * 108.20499 * 0.24515 * 22 4 3 24 24 H 1.08998 * 109.47157 * 270.31004 * 1 2 3 25 25 H 1.09003 * 109.47278 * 30.30454 * 1 2 3 26 26 H 1.08993 * 109.47691 * 150.30806 * 1 2 3 27 27 H 1.08005 * 126.12512 * 0.02562 * 3 2 1 28 28 H 1.09002 * 109.47153 * 299.99793 * 6 5 4 29 29 H 1.09001 * 109.46832 * 179.97438 * 6 5 4 30 30 H 1.09004 * 109.47261 * 59.99965 * 6 5 4 31 31 H 1.08993 * 109.46955 * 300.00219 * 7 5 4 32 32 H 1.09000 * 109.47050 * 60.00048 * 7 5 4 33 33 H 1.09001 * 109.47002 * 179.97438 * 7 5 4 34 34 H 1.00900 * 111.00051 * 56.04970 * 8 5 4 35 35 H 1.09001 * 109.46887 * 300.00344 * 9 8 5 36 36 H 1.09000 * 109.47281 * 60.00068 * 9 8 5 37 37 H 0.96995 * 120.00280 * 359.97438 * 12 10 9 38 38 H 1.08997 * 109.46660 * 300.00196 * 13 12 10 39 39 H 1.09000 * 109.47107 * 59.99741 * 13 12 10 40 40 H 0.97002 * 120.00270 * 180.02562 * 17 16 14 41 41 H 1.08000 * 125.89488 * 180.26034 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2590 1.0911 0.0000 4 6 3.5437 0.6664 -0.0034 5 6 4.7681 1.5451 -0.0073 6 6 4.7620 2.4227 -1.2606 7 6 4.7617 2.4341 1.2379 8 7 5.9733 0.7053 -0.0033 9 6 7.1893 1.5297 -0.0064 10 6 8.4024 0.6356 -0.0028 11 8 8.2674 -0.5697 0.0014 12 7 9.6374 1.1754 -0.0042 13 6 10.8167 0.3062 -0.0013 14 6 12.0639 1.1519 -0.0030 15 1 11.9861 2.2290 -0.0056 16 6 13.3046 0.5504 -0.0013 17 7 13.3995 -0.7613 0.0013 18 14 14.8508 1.5986 -0.0042 19 1 14.4748 3.0353 -0.0075 20 1 15.6533 1.3004 1.2092 21 1 15.6534 1.2937 -1.2158 22 6 3.5345 -0.7323 0.0035 23 7 2.2890 -1.1328 0.0055 24 1 -0.3633 0.0056 1.0276 25 1 -0.3634 0.8873 -0.5186 26 1 -0.3634 -0.8926 -0.5090 27 1 1.9282 2.1193 0.0004 28 1 4.7665 1.7893 -2.1477 29 1 5.6473 3.0585 -1.2631 30 1 3.8676 3.0457 -1.2635 31 1 3.8674 3.0571 1.2350 32 1 4.7660 1.8089 2.1308 33 1 5.6475 3.0693 1.2354 34 1 5.9694 0.0634 -0.7818 35 1 7.2019 2.1551 -0.8990 36 1 7.2014 2.1626 0.8809 37 1 9.7453 2.1393 -0.0079 38 1 10.8040 -0.3202 0.8906 39 1 10.8045 -0.3258 -0.8893 40 1 14.2724 -1.1844 0.0029 41 1 4.4053 -1.3712 0.0069 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000754873242.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:53:19 Heat of formation + Delta-G solvation = 42.838062 kcal Electronic energy + Delta-G solvation = -21436.025389 eV Core-core repulsion = 18159.820007 eV Total energy + Delta-G solvation = -3276.205382 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 280.164 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.39944 -38.99227 -37.35836 -34.11500 -33.25478 -32.30140 -31.74804 -29.18506 -27.89959 -27.37086 -26.98558 -25.47761 -22.58870 -21.58463 -20.96503 -19.61714 -19.09650 -17.76120 -16.72406 -15.73940 -15.63351 -15.51872 -15.12728 -14.65315 -14.53358 -14.31719 -13.92763 -13.81870 -13.29747 -13.16068 -12.84133 -12.75702 -12.66798 -12.50779 -11.98733 -11.92477 -11.68604 -11.55732 -11.34188 -11.18492 -10.92396 -10.86836 -10.46061 -10.29303 -9.49232 -9.34907 -8.98222 -8.70926 -8.52924 -8.21785 -7.81196 -6.14149 -4.20801 1.77601 2.39759 2.77461 3.24950 3.31900 3.34899 3.46134 3.83453 4.30189 4.35947 4.54713 4.69026 4.78810 4.84243 5.02653 5.07718 5.08602 5.19965 5.21924 5.41470 5.44158 5.53465 5.57852 5.63742 5.68150 5.79414 5.87477 6.01053 6.06575 6.24569 6.61503 6.84352 7.07221 7.36835 7.47844 7.51060 7.56700 7.64986 7.71412 8.00597 8.68901 8.82798 9.18021 9.46068 10.96107 Molecular weight = 280.16amu Principal moments of inertia in cm(-1) A = 0.045693 B = 0.002780 C = 0.002671 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 612.634458 B =10071.296566 C =10480.228213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.104 3.896 2 N -0.382 5.382 3 C 0.054 3.946 4 C -0.216 4.216 5 C 0.190 3.810 6 C -0.179 4.179 7 C -0.137 4.137 8 N -0.658 5.658 9 C 0.036 3.964 10 C 0.496 3.504 11 O -0.544 6.544 12 N -0.716 5.716 13 C 0.251 3.749 14 C -0.542 4.542 15 H 0.063 0.937 16 C 0.062 3.938 17 N -0.885 5.885 18 Si 0.903 3.097 19 H -0.272 1.272 20 H -0.282 1.282 21 H -0.282 1.282 22 C 0.072 3.928 23 N -0.303 5.303 24 H 0.072 0.928 25 H 0.084 0.916 26 H 0.087 0.913 27 H 0.169 0.831 28 H 0.056 0.944 29 H 0.061 0.939 30 H 0.058 0.942 31 H 0.054 0.946 32 H 0.065 0.935 33 H 0.058 0.942 34 H 0.351 0.649 35 H 0.057 0.943 36 H 0.099 0.901 37 H 0.389 0.611 38 H 0.026 0.974 39 H 0.026 0.974 40 H 0.265 0.735 41 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.467 9.145 -0.931 26.137 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.165 5.165 3 C -0.092 4.092 4 C -0.228 4.228 5 C 0.097 3.903 6 C -0.238 4.238 7 C -0.194 4.194 8 N -0.290 5.290 9 C -0.097 4.097 10 C 0.280 3.720 11 O -0.421 6.421 12 N -0.365 5.365 13 C 0.130 3.870 14 C -0.580 4.580 15 H 0.081 0.919 16 C -0.141 4.141 17 N -0.523 5.523 18 Si 0.731 3.269 19 H -0.197 1.197 20 H -0.208 1.208 21 H -0.208 1.208 22 C -0.114 4.114 23 N -0.124 5.124 24 H 0.090 0.910 25 H 0.102 0.898 26 H 0.106 0.894 27 H 0.186 0.814 28 H 0.075 0.925 29 H 0.080 0.920 30 H 0.077 0.923 31 H 0.073 0.927 32 H 0.084 0.916 33 H 0.077 0.923 34 H 0.171 0.829 35 H 0.075 0.925 36 H 0.117 0.883 37 H 0.221 0.779 38 H 0.044 0.956 39 H 0.044 0.956 40 H 0.075 0.925 41 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges -25.363 6.997 -0.242 26.312 hybrid contribution 1.480 2.047 -0.902 2.682 sum -23.883 9.044 -1.143 25.564 Atomic orbital electron populations 1.21788 0.74574 1.04241 1.03152 1.48438 1.06447 1.03969 1.57615 1.22090 0.90769 0.93128 1.03230 1.19845 0.93333 0.93984 1.15679 1.19066 0.86793 0.90102 0.94324 1.22603 1.02172 1.00460 0.98608 1.21916 1.01260 0.98660 0.97596 1.60226 0.99212 1.18168 1.51430 1.21933 0.89633 0.95698 1.02412 1.20385 0.84627 0.89167 0.77778 1.90660 1.86410 1.15024 1.50054 1.46439 1.06481 1.10682 1.72897 1.19079 0.80283 0.89973 0.97689 1.21270 0.90580 0.93190 1.52978 0.91884 1.24962 0.99300 0.95065 0.94782 1.69984 1.24732 1.08516 1.49032 0.86370 0.82610 0.80238 0.77729 1.19660 1.20813 1.20835 1.23901 0.94911 0.94740 0.97882 1.77415 1.01894 1.07940 1.25137 0.90974 0.89762 0.89428 0.81400 0.92475 0.91958 0.92297 0.92662 0.91572 0.92274 0.82864 0.92544 0.88325 0.77859 0.95552 0.95643 0.92523 0.79357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.58 11.47 59.85 0.69 1.27 16 2 N -0.38 -3.89 4.01 -68.17 -0.27 -4.16 16 3 C 0.05 0.50 10.80 -17.22 -0.19 0.32 16 4 C -0.22 -2.43 4.77 -105.05 -0.50 -2.93 16 5 C 0.19 2.02 0.87 -132.76 -0.12 1.90 16 6 C -0.18 -1.64 8.11 37.16 0.30 -1.34 16 7 C -0.14 -1.32 8.11 37.16 0.30 -1.02 16 8 N -0.66 -8.90 5.18 -102.39 -0.53 -9.43 16 9 C 0.04 0.49 5.38 -4.97 -0.03 0.47 16 10 C 0.50 9.79 7.87 -10.98 -0.09 9.70 16 11 O -0.54 -13.04 16.20 5.56 0.09 -12.95 16 12 N -0.72 -14.97 5.55 -61.47 -0.34 -15.31 16 13 C 0.25 6.68 5.43 -5.19 -0.03 6.65 16 14 C -0.54 -14.74 9.28 -34.44 -0.32 -15.06 16 15 H 0.06 1.60 7.60 -52.49 -0.40 1.20 16 16 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 17 N -0.89 -26.26 13.29 55.43 0.74 -25.52 16 18 Si 0.90 20.90 29.54 -169.99 -5.02 15.88 16 19 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 20 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 21 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 22 C 0.07 0.94 11.10 -17.36 -0.19 0.75 16 23 N -0.30 -4.05 12.58 30.62 0.39 -3.66 16 24 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 25 H 0.08 0.25 8.14 -51.93 -0.42 -0.17 16 26 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 27 H 0.17 0.99 8.06 -52.48 -0.42 0.57 16 28 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 29 H 0.06 0.55 6.41 -51.93 -0.33 0.22 16 30 H 0.06 0.44 8.01 -51.93 -0.42 0.03 16 31 H 0.05 0.42 8.00 -51.93 -0.42 0.01 16 32 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 33 H 0.06 0.54 6.40 -51.93 -0.33 0.21 16 34 H 0.35 5.03 7.81 -39.29 -0.31 4.73 16 35 H 0.06 0.67 6.30 -51.93 -0.33 0.35 16 36 H 0.10 1.22 6.30 -51.93 -0.33 0.90 16 37 H 0.39 6.90 8.32 -40.82 -0.34 6.56 16 38 H 0.03 0.78 8.14 -51.93 -0.42 0.36 16 39 H 0.03 0.75 8.14 -51.93 -0.42 0.33 16 40 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 41 H 0.19 2.48 7.62 -52.49 -0.40 2.08 16 LS Contribution 342.44 15.07 5.16 5.16 Total: -1.00 -34.54 342.44 -6.17 -40.71 By element: Atomic # 1 Polarization: 13.04 SS G_CDS: -6.11 Total: 6.92 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -0.26 Total: 2.36 kcal Atomic # 7 Polarization: -58.06 SS G_CDS: -0.02 Total: -58.09 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: 0.09 Total: -12.95 kcal Atomic # 14 Polarization: 20.90 SS G_CDS: -5.02 Total: 15.88 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -34.54 -6.17 -40.71 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000754873242.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.550 kcal (2) G-P(sol) polarization free energy of solvation -34.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.171 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.712 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds