Wall clock time and date at job start Tue Mar 31 2020 03:47:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34225 * 117.00237 * 2 1 4 4 O 1.20832 * 119.99960 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00536 * 179.97438 * 3 2 1 6 6 N 1.46492 * 109.47653 * 180.02562 * 5 3 2 7 7 C 1.36898 * 120.00413 * 262.89814 * 6 5 3 8 8 H 1.07994 * 120.00346 * 140.75274 * 7 6 5 9 9 C 1.39037 * 119.99532 * 320.75897 * 7 6 5 10 10 N 1.31378 * 119.99819 * 340.68772 * 9 7 6 11 11 Si 1.86799 * 119.99980 * 160.69444 * 9 7 6 12 12 H 1.48500 * 109.47386 * 59.99140 * 11 9 7 13 13 H 1.48494 * 109.47110 * 179.97438 * 11 9 7 14 14 H 1.48507 * 109.46833 * 299.99301 * 11 9 7 15 15 C 1.34777 * 120.00222 * 82.89344 * 6 5 3 16 16 O 1.21607 * 119.99759 * 8.57320 * 15 6 5 17 17 C 1.47568 * 120.00176 * 188.57778 * 15 6 5 18 18 C 1.40068 * 120.58687 * 325.72987 * 17 15 6 19 19 C 1.38328 * 118.31495 * 180.26183 * 18 17 15 20 20 C 1.38354 * 119.38069 * 359.48567 * 19 18 17 21 21 N 1.31921 * 121.15242 * 0.27854 * 20 19 18 22 22 C 1.31932 * 121.84276 * 359.97438 * 21 20 19 23 23 F 1.35099 * 119.76035 * 179.97438 * 22 21 20 24 24 H 1.08997 * 109.46738 * 299.99212 * 1 2 3 25 25 H 1.08999 * 109.47082 * 59.99731 * 1 2 3 26 26 H 1.09000 * 109.46760 * 179.97438 * 1 2 3 27 27 H 1.08999 * 109.46691 * 60.00174 * 5 3 2 28 28 H 1.09000 * 109.47225 * 300.00953 * 5 3 2 29 29 H 0.96993 * 119.99687 * 180.02562 * 10 9 7 30 30 H 1.08007 * 120.84145 * 0.02737 * 18 17 15 31 31 H 1.07997 * 120.30838 * 179.76636 * 19 18 17 32 32 H 1.08004 * 119.42332 * 180.25567 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 7 3.9818 2.6797 0.0011 7 6 4.3169 3.2949 -1.1751 8 1 4.0208 4.3181 -1.3528 9 6 5.0383 2.6021 -2.1409 10 7 5.7188 1.5287 -1.8083 11 14 5.0401 3.1978 -3.9114 12 1 5.5926 4.5750 -3.9698 13 1 5.8791 2.2928 -4.7373 14 1 3.6502 3.1995 -4.4344 15 6 4.0340 3.3666 1.1595 16 8 3.8892 2.7856 2.2179 17 6 4.2667 4.8237 1.1434 18 6 5.0950 5.4025 0.1735 19 6 5.2848 6.7723 0.2056 20 6 4.6488 7.5232 1.1781 21 7 3.8693 6.9548 2.0779 22 6 3.6594 5.6524 2.0940 23 9 2.8533 5.1146 3.0353 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.9564 0.7806 -0.8892 28 1 3.9558 0.7808 0.8907 29 1 6.2224 1.0457 -2.4820 30 1 5.5764 4.7942 -0.5781 31 1 5.9200 7.2518 -0.5246 32 1 4.7932 8.5933 1.2012 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000808431663.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:47:00 Heat of formation + Delta-G solvation = -103.555062 kcal Electronic energy + Delta-G solvation = -22527.744568 eV Core-core repulsion = 18790.460380 eV Total energy + Delta-G solvation = -3737.284188 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 282.085 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.39005 -40.08662 -39.55961 -38.15734 -35.83522 -35.01175 -32.40565 -31.85075 -30.59996 -28.66504 -26.56807 -25.40321 -23.64364 -22.92367 -20.86886 -19.62740 -18.16244 -17.33232 -17.06068 -16.79502 -16.35234 -15.82951 -15.52470 -15.38388 -14.95822 -14.61997 -14.53201 -13.67997 -13.33803 -13.06880 -12.91881 -12.81142 -12.58929 -12.47321 -12.16975 -11.79616 -11.56870 -11.41599 -11.07001 -10.88836 -10.60028 -10.30635 -9.87120 -9.54918 -9.49272 -9.35110 -8.78994 -8.52906 -7.86280 -6.71878 -4.41532 1.11915 1.56161 2.94162 2.97095 3.05965 3.07347 3.12707 3.62605 3.86839 3.95223 4.19670 4.43641 4.71999 4.97553 5.25701 5.40215 5.41637 5.47552 5.49597 5.56299 5.84969 5.93659 6.08334 6.22590 6.51543 6.55952 6.63831 6.93437 7.00219 7.13607 7.48988 7.94765 7.99357 8.46642 8.70875 9.07183 9.51932 10.31565 Molecular weight = 282.08amu Principal moments of inertia in cm(-1) A = 0.012749 B = 0.008939 C = 0.005917 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2195.682488 B = 3131.591646 C = 4730.808792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.367 6.367 3 C 0.443 3.557 4 O -0.505 6.505 5 C 0.129 3.871 6 N -0.416 5.416 7 C -0.352 4.352 8 H 0.098 0.902 9 C 0.046 3.954 10 N -0.852 5.852 11 Si 0.916 3.084 12 H -0.266 1.266 13 H -0.279 1.279 14 H -0.270 1.270 15 C 0.532 3.468 16 O -0.578 6.578 17 C -0.168 4.168 18 C -0.007 4.007 19 C -0.206 4.206 20 C 0.134 3.866 21 N -0.530 5.530 22 C 0.339 3.661 23 F -0.101 7.101 24 H 0.057 0.943 25 H 0.057 0.943 26 H 0.094 0.906 27 H 0.143 0.857 28 H 0.105 0.895 29 H 0.278 0.722 30 H 0.184 0.816 31 H 0.141 0.859 32 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.022 2.789 -2.057 3.613 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.284 6.284 3 C 0.285 3.715 4 O -0.391 6.391 5 C 0.003 3.997 6 N -0.134 5.134 7 C -0.479 4.479 8 H 0.116 0.884 9 C -0.162 4.162 10 N -0.486 5.486 11 Si 0.741 3.259 12 H -0.191 1.191 13 H -0.204 1.204 14 H -0.195 1.195 15 C 0.321 3.679 16 O -0.462 6.462 17 C -0.174 4.174 18 C -0.032 4.032 19 C -0.226 4.226 20 C -0.023 4.023 21 N -0.245 5.245 22 C 0.185 3.815 23 F -0.080 7.080 24 H 0.076 0.924 25 H 0.075 0.925 26 H 0.112 0.888 27 H 0.160 0.840 28 H 0.122 0.878 29 H 0.089 0.911 30 H 0.201 0.799 31 H 0.159 0.841 32 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -1.639 3.082 -0.965 3.621 hybrid contribution -0.133 -0.261 -1.451 1.480 sum -1.772 2.820 -2.416 4.115 Atomic orbital electron populations 1.23111 0.77910 1.02721 1.02068 1.86537 1.22346 1.34607 1.84872 1.25287 0.93596 0.80968 0.71625 1.90598 1.67063 1.36413 1.45008 1.20943 0.84161 0.87235 1.07317 1.42736 1.56177 1.08613 1.05861 1.19569 1.34434 1.00258 0.93641 0.88445 1.25458 0.93696 0.96472 1.00549 1.69854 1.25373 1.18316 1.35098 0.86157 0.78916 0.79230 0.81589 1.19093 1.20438 1.19500 1.17785 0.80060 0.85933 0.84114 1.90691 1.54760 1.69975 1.30726 1.20758 1.02691 0.95979 0.98014 1.22850 0.91301 0.94605 0.94446 1.22181 1.03726 0.95055 1.01618 1.22520 0.90714 0.99993 0.89091 1.66988 1.19684 1.10512 1.27297 1.18185 0.89474 0.87614 0.86210 1.91642 1.69597 1.84593 1.62156 0.92422 0.92454 0.88790 0.83961 0.87754 0.91115 0.79874 0.84070 0.82166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.54 10.56 101.05 1.07 1.60 16 2 O -0.37 -7.00 10.57 -39.24 -0.41 -7.41 16 3 C 0.44 9.96 7.97 36.01 0.29 10.25 16 4 O -0.50 -12.62 16.00 -18.76 -0.30 -12.92 16 5 C 0.13 2.96 5.50 -5.20 -0.03 2.93 16 6 N -0.42 -10.17 2.08 -117.27 -0.24 -10.42 16 7 C -0.35 -8.21 6.42 -14.99 -0.10 -8.30 16 8 H 0.10 2.21 5.83 -52.49 -0.31 1.90 16 9 C 0.05 1.04 4.92 -17.45 -0.09 0.95 16 10 N -0.85 -19.82 11.57 55.50 0.64 -19.17 16 11 Si 0.92 17.48 29.60 -169.99 -5.03 12.45 16 12 H -0.27 -4.85 7.11 56.52 0.40 -4.45 16 13 H -0.28 -5.31 7.11 56.52 0.40 -4.91 16 14 H -0.27 -5.33 7.11 56.52 0.40 -4.93 16 15 C 0.53 13.39 7.01 -12.46 -0.09 13.31 16 16 O -0.58 -15.78 15.74 5.27 0.08 -15.69 16 17 C -0.17 -3.72 5.55 -104.76 -0.58 -4.30 16 18 C -0.01 -0.12 7.79 -38.86 -0.30 -0.42 16 19 C -0.21 -3.01 10.09 -39.51 -0.40 -3.41 16 20 C 0.13 1.98 11.17 -17.47 -0.20 1.78 16 21 N -0.53 -10.01 10.36 -13.20 -0.14 -10.15 16 22 C 0.34 7.36 8.38 -16.86 -0.14 7.22 16 23 F -0.10 -2.35 16.14 2.25 0.04 -2.32 16 24 H 0.06 0.86 8.13 -51.93 -0.42 0.44 16 25 H 0.06 0.83 8.13 -51.93 -0.42 0.41 16 26 H 0.09 1.02 8.14 -51.93 -0.42 0.60 16 27 H 0.14 3.25 5.69 -51.93 -0.30 2.96 16 28 H 0.10 2.36 7.53 -51.93 -0.39 1.97 16 29 H 0.28 6.09 8.31 -40.82 -0.34 5.75 16 30 H 0.18 3.50 5.46 -52.48 -0.29 3.22 16 31 H 0.14 1.54 8.06 -52.49 -0.42 1.11 16 32 H 0.16 1.67 8.06 -52.48 -0.42 1.24 16 LS Contribution 292.06 15.07 4.40 4.40 Total: -1.00 -30.26 292.06 -4.05 -34.31 By element: Atomic # 1 Polarization: 7.84 SS G_CDS: -2.53 Total: 5.31 kcal Atomic # 6 Polarization: 22.18 SS G_CDS: -0.56 Total: 21.61 kcal Atomic # 7 Polarization: -40.00 SS G_CDS: 0.26 Total: -39.74 kcal Atomic # 8 Polarization: -35.40 SS G_CDS: -0.63 Total: -36.03 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.04 Total: -2.32 kcal Atomic # 14 Polarization: 17.48 SS G_CDS: -5.03 Total: 12.45 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -30.26 -4.05 -34.31 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000808431663.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.242 kcal (2) G-P(sol) polarization free energy of solvation -30.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.502 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds