Wall clock time and date at job start Tue Mar 31 2020 03:47:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34671 * 117.00195 * 2 1 4 4 O 1.21415 * 119.99428 * 0.02562 * 3 2 1 5 5 C 1.48150 * 120.00406 * 180.27490 * 3 2 1 6 6 C 1.39787 * 119.85615 * 359.72985 * 5 3 2 7 7 C 1.36458 * 120.30638 * 179.97438 * 6 5 3 8 8 N 1.48017 * 120.00305 * 179.97438 * 7 6 5 9 9 O 1.31700 * 120.00050 * 353.76571 * 8 7 6 10 10 O 1.31702 * 120.00150 * 173.77003 * 8 7 6 11 11 C 1.41095 * 120.00092 * 359.97438 * 7 6 5 12 12 C 1.40822 * 120.14626 * 180.02562 * 11 7 6 13 13 H 1.08002 * 119.99779 * 324.06981 * 12 11 7 14 14 C 1.46419 * 119.99837 * 144.06000 * 12 11 7 15 15 N 1.29571 * 119.99858 * 170.80423 * 14 12 11 16 16 Si 1.86798 * 120.00421 * 350.81120 * 14 12 11 17 17 H 1.48496 * 109.47123 * 88.47050 * 16 14 12 18 18 H 1.48495 * 109.47141 * 208.47373 * 16 14 12 19 19 H 1.48500 * 109.46766 * 328.47479 * 16 14 12 20 20 C 1.41008 * 119.71117 * 0.02562 * 11 7 6 21 21 C 1.37757 * 119.70239 * 359.74446 * 20 11 7 22 22 Cl 1.73601 * 120.00578 * 180.24907 * 21 20 11 23 23 H 1.08998 * 109.47376 * 59.99956 * 1 2 3 24 24 H 1.09005 * 109.46927 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47083 * 299.99636 * 1 2 3 26 26 H 1.08009 * 119.84937 * 359.94730 * 6 5 3 27 27 H 0.97001 * 120.00600 * 179.97438 * 15 14 12 28 28 H 1.08004 * 120.15156 * 180.02562 * 20 11 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0634 1.1999 0.0000 4 8 1.4020 2.2181 0.0005 5 6 3.5428 1.2775 -0.0062 6 6 4.3013 0.1033 -0.0062 7 6 5.6645 0.1640 -0.0124 8 7 6.4610 -1.0835 -0.0119 9 8 5.8603 -2.2483 0.1184 10 8 7.7705 -1.0289 -0.1416 11 6 6.3149 1.4161 -0.0193 12 6 7.7215 1.4824 -0.0262 13 1 8.2991 0.7529 0.5221 14 6 8.4008 2.5401 -0.7769 15 7 9.6781 2.7119 -0.6426 16 14 7.4263 3.6420 -1.9282 17 1 6.9061 4.8100 -1.1730 18 1 8.3082 4.1148 -3.0253 19 1 6.2898 2.8771 -2.5013 20 6 5.5502 2.6009 -0.0192 21 6 4.1747 2.5255 -0.0177 22 17 3.2255 3.9790 -0.0242 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 3.8061 -0.8566 -0.0010 27 1 10.1283 3.4124 -1.1402 28 1 6.0406 3.5631 -0.0249 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000199820832.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:47:31 Heat of formation + Delta-G solvation = -51.118969 kcal Electronic energy + Delta-G solvation = -20002.529342 eV Core-core repulsion = 16434.992093 eV Total energy + Delta-G solvation = -3567.537249 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 285.028 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.05040 -38.81514 -37.03062 -35.99536 -35.74561 -34.64112 -33.10276 -31.71218 -30.63867 -28.03876 -26.52933 -25.00450 -22.75776 -21.92509 -20.31078 -18.70459 -17.95375 -17.06123 -16.47972 -16.20770 -15.97297 -15.88788 -14.81870 -14.60090 -14.48934 -14.04105 -13.45977 -13.32795 -12.98463 -12.64686 -12.20956 -11.84838 -11.74125 -11.62061 -11.40988 -10.93440 -10.88567 -10.64852 -10.49001 -10.12277 -9.96133 -9.60781 -9.47861 -9.40193 -8.68089 -8.52638 -7.98256 -5.57653 0.53332 1.29245 2.11992 2.44510 2.50507 2.60485 2.66972 2.70946 2.95951 3.11541 3.28021 3.66370 4.31353 5.13003 5.20065 5.26595 5.32614 5.52059 5.62277 5.70832 5.89584 6.05448 6.22581 6.33528 6.59189 6.76174 6.80866 6.97025 7.15740 7.52449 7.69793 8.20578 8.24547 8.84404 Molecular weight = 285.03amu Principal moments of inertia in cm(-1) A = 0.015911 B = 0.008024 C = 0.005559 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1759.333596 B = 3488.542516 C = 5035.917831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.362 6.362 3 C 0.516 3.484 4 O -0.510 6.510 5 C -0.251 4.251 6 C 0.073 3.927 7 C -0.102 4.102 8 N 0.029 4.971 9 O -0.303 6.303 10 O -0.229 6.229 11 C 0.059 3.941 12 C -0.268 4.268 13 H 0.142 0.858 14 C 0.058 3.942 15 N -0.693 5.693 16 Si 0.914 3.086 17 H -0.246 1.246 18 H -0.268 1.268 19 H -0.231 1.231 20 C -0.192 4.192 21 C 0.068 3.932 22 Cl -0.057 7.057 23 H 0.058 0.942 24 H 0.096 0.904 25 H 0.059 0.941 26 H 0.148 0.852 27 H 0.315 0.685 28 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.049 3.913 -1.222 8.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 O -0.279 6.279 3 C 0.363 3.637 4 O -0.400 6.400 5 C -0.256 4.256 6 C 0.053 3.947 7 C -0.199 4.199 8 N 0.468 4.532 9 O -0.460 6.460 10 O -0.404 6.404 11 C 0.053 3.947 12 C -0.292 4.292 13 H 0.160 0.840 14 C -0.177 4.177 15 N -0.310 5.310 16 Si 0.735 3.265 17 H -0.171 1.171 18 H -0.193 1.193 19 H -0.153 1.153 20 C -0.212 4.212 21 C 0.040 3.960 22 Cl -0.027 7.027 23 H 0.077 0.923 24 H 0.115 0.885 25 H 0.078 0.922 26 H 0.165 0.835 27 H 0.128 0.872 28 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -7.356 4.630 -1.228 8.778 hybrid contribution -0.182 0.276 -0.362 0.490 sum -7.538 4.906 -1.591 9.133 Atomic orbital electron populations 1.23136 0.76982 1.03061 1.02153 1.86546 1.22729 1.33500 1.85120 1.20970 0.88623 0.81132 0.72961 1.90829 1.66547 1.35316 1.47314 1.17754 0.88568 0.91601 1.27657 1.20495 0.91121 0.98539 0.84589 1.19597 0.89576 0.82115 1.28590 1.49854 1.02691 1.03110 0.97509 1.96139 1.73238 1.13694 1.62973 1.96149 0.90449 1.95599 1.58181 1.16985 0.93631 0.88510 0.95590 1.22482 0.90461 1.04623 1.11656 0.84019 1.28209 0.95555 0.96278 0.97707 1.68919 1.10876 1.23254 1.27952 0.86197 0.81038 0.80066 0.79205 1.17068 1.19326 1.15311 1.21002 0.90565 0.98063 1.11542 1.20611 0.91135 0.86290 0.97958 1.98355 1.72587 1.35592 1.96209 0.92276 0.88549 0.92248 0.83487 0.87221 0.84687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.49 10.56 101.05 1.07 1.56 15 2 O -0.36 -5.98 9.79 -40.42 -0.40 -6.37 15 3 C 0.52 9.71 7.90 34.80 0.27 9.98 15 4 O -0.51 -10.06 13.72 -19.20 -0.26 -10.33 15 5 C -0.25 -5.00 5.90 -104.63 -0.62 -5.62 15 6 C 0.07 1.49 9.08 -39.64 -0.36 1.13 15 7 C -0.10 -2.30 6.89 -79.51 -0.55 -2.85 15 8 N 0.03 0.72 4.98 34.18 0.17 0.90 15 9 O -0.30 -7.59 19.14 -31.57 -0.60 -8.19 15 10 O -0.23 -5.89 16.23 -31.57 -0.51 -6.41 15 11 C 0.06 1.29 5.11 -106.79 -0.55 0.74 15 12 C -0.27 -5.98 8.39 -35.31 -0.30 -6.28 15 13 H 0.14 3.45 6.04 -52.49 -0.32 3.13 15 14 C 0.06 1.17 5.65 -15.21 -0.09 1.09 15 15 N -0.69 -13.82 13.89 55.98 0.78 -13.04 15 16 Si 0.91 15.90 24.64 -169.99 -4.19 11.71 15 17 H -0.25 -4.01 6.65 56.52 0.38 -3.63 15 18 H -0.27 -4.36 7.11 56.52 0.40 -3.96 15 19 H -0.23 -4.29 6.90 56.52 0.39 -3.90 15 20 C -0.19 -3.85 6.98 -38.71 -0.27 -4.12 15 21 C 0.07 1.35 6.34 -39.14 -0.25 1.10 15 22 Cl -0.06 -1.05 25.98 -51.86 -1.35 -2.39 15 23 H 0.06 0.69 8.14 -51.93 -0.42 0.27 15 24 H 0.10 0.86 8.14 -51.93 -0.42 0.44 15 25 H 0.06 0.69 8.14 -51.93 -0.42 0.27 15 26 H 0.15 2.84 7.08 -52.48 -0.37 2.47 15 27 H 0.31 5.33 8.27 -40.82 -0.34 4.99 15 28 H 0.14 2.51 4.86 -52.48 -0.26 2.26 15 LS Contribution 272.47 15.07 4.11 4.11 Total: -1.00 -25.68 272.47 -5.27 -30.95 By element: Atomic # 1 Polarization: 3.72 SS G_CDS: -1.38 Total: 2.34 kcal Atomic # 6 Polarization: -1.64 SS G_CDS: -1.63 Total: -3.27 kcal Atomic # 7 Polarization: -13.09 SS G_CDS: 0.95 Total: -12.15 kcal Atomic # 8 Polarization: -29.52 SS G_CDS: -1.78 Total: -31.30 kcal Atomic # 14 Polarization: 15.90 SS G_CDS: -4.19 Total: 11.71 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.35 Total: -2.39 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -25.68 -5.27 -30.95 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000199820832.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.171 kcal (2) G-P(sol) polarization free energy of solvation -25.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds