Wall clock time and date at job start Tue Mar 31 2020 04:30:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37098 * 119.99878 * 2 1 4 4 H 1.08002 * 119.99550 * 185.26420 * 3 2 1 5 5 C 1.38947 * 120.00016 * 5.26997 * 3 2 1 6 6 N 1.31411 * 119.99927 * 5.27561 * 5 3 2 7 7 Si 1.86800 * 119.99706 * 185.27390 * 5 3 2 8 8 H 1.48504 * 109.47020 * 60.00333 * 7 5 3 9 9 H 1.48509 * 109.46725 * 179.97438 * 7 5 3 10 10 H 1.48496 * 109.47592 * 300.00034 * 7 5 3 11 11 C 1.34780 * 120.00132 * 179.97438 * 2 1 3 12 12 O 1.21292 * 120.00091 * 185.72271 * 11 2 1 13 13 C 1.50703 * 119.99735 * 5.72623 * 11 2 1 14 14 H 1.08994 * 109.40351 * 25.76618 * 13 11 2 15 15 C 1.53074 * 109.39687 * 266.02579 * 13 11 2 16 16 C 1.53345 * 108.42168 * 190.97228 * 15 13 11 17 17 C 1.52923 * 108.67483 * 67.53037 * 16 15 13 18 18 H 1.08997 * 109.13085 * 69.45632 * 17 16 15 19 19 C 1.53001 * 109.29708 * 188.93352 * 17 16 15 20 20 F 1.39908 * 109.46660 * 181.03635 * 19 17 16 21 21 F 1.39894 * 109.47399 * 61.04059 * 19 17 16 22 22 F 1.39901 * 109.47420 * 301.03266 * 19 17 16 23 23 N 1.45745 * 110.48878 * 309.24783 * 17 16 15 24 24 C 1.33357 * 124.10759 * 19.06903 * 23 17 16 25 25 O 1.21282 * 118.24539 * 177.79645 * 24 23 17 26 26 H 1.09003 * 109.46960 * 175.11090 * 1 2 3 27 27 H 1.09006 * 109.47505 * 295.10818 * 1 2 3 28 28 H 1.08997 * 109.47258 * 55.11090 * 1 2 3 29 29 H 0.97001 * 119.99741 * 179.97438 * 6 5 3 30 30 H 1.08997 * 109.67479 * 310.70347 * 15 13 11 31 31 H 1.08999 * 109.67146 * 71.20352 * 15 13 11 32 32 H 1.09001 * 109.60399 * 307.77639 * 16 15 13 33 33 H 1.08998 * 109.60180 * 187.28518 * 16 15 13 34 34 H 0.96996 * 117.94746 * 199.05194 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1504 1.1873 0.0000 4 1 3.2270 1.1892 -0.0858 5 6 1.4601 2.3881 0.1105 6 7 0.1626 2.3832 0.3190 7 14 2.3764 4.0092 -0.0372 8 1 3.0266 4.0905 -1.3699 9 1 1.4193 5.1344 0.1155 10 1 3.4114 4.0914 1.0244 11 6 2.1389 -1.1672 0.0005 12 8 3.3473 -1.1698 0.1053 13 6 1.3910 -2.4691 -0.1291 14 1 0.4501 -2.2958 -0.6513 15 6 1.1007 -3.0297 1.2654 16 6 0.5930 -4.4686 1.1132 17 6 1.7380 -5.3396 0.5947 18 1 2.4895 -5.4446 1.3771 19 6 1.1951 -6.7218 0.2263 20 9 2.2441 -7.5293 -0.2264 21 9 0.2367 -6.5922 -0.7845 22 9 0.6082 -7.3078 1.3530 23 7 2.3484 -4.7326 -0.5814 24 6 2.2221 -3.4463 -0.9098 25 8 2.8098 -3.0442 -1.8915 26 1 -0.3633 -1.0240 -0.0876 27 1 -0.3634 0.4361 0.9306 28 1 -0.3633 0.5878 -0.8429 29 1 -0.3193 3.2215 0.3966 30 1 2.0137 -3.0237 1.8607 31 1 0.3398 -2.4213 1.7543 32 1 -0.2341 -4.4915 0.4036 33 1 0.2583 -4.8426 2.0808 34 1 2.8800 -5.2998 -1.1615 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263829220.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:30:34 Heat of formation + Delta-G solvation = -207.169352 kcal Electronic energy + Delta-G solvation = -24751.765695 eV Core-core repulsion = 20463.365878 eV Total energy + Delta-G solvation = -4288.399817 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 294.098 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -50.41194 -47.92583 -47.85903 -40.56869 -38.09707 -36.69840 -34.74585 -33.21191 -31.52361 -30.55629 -27.30472 -26.19593 -24.35034 -23.44909 -22.76626 -20.26259 -19.14958 -18.62635 -18.46204 -18.18413 -17.20835 -16.83358 -16.21242 -15.84246 -14.82460 -14.75408 -14.68204 -14.33172 -14.26031 -14.21987 -14.09997 -14.00382 -13.99119 -13.77912 -13.56016 -12.94757 -12.72135 -12.10168 -11.96607 -11.62294 -11.44631 -11.22708 -11.08106 -10.96492 -10.70749 -10.41716 -10.16185 -9.57082 -9.33210 -9.07258 -8.45031 -7.88926 -6.27162 -3.83463 2.27270 2.77516 2.92500 3.17766 3.23652 3.28682 3.40819 3.63689 3.72091 3.98716 4.09559 4.36537 4.58096 4.61301 4.73678 4.93953 5.10188 5.23577 5.31225 5.53057 5.59293 5.74144 5.88569 6.12785 6.29357 6.67306 7.01456 7.15350 7.34238 7.54199 8.01256 8.31840 8.45115 9.15390 9.39181 9.91589 10.67370 Molecular weight = 294.10amu Principal moments of inertia in cm(-1) A = 0.037273 B = 0.003982 C = 0.003806 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 751.041089 B = 7030.442554 C = 7355.363151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.110 3.890 2 N -0.442 5.442 3 C -0.297 4.297 4 H 0.104 0.896 5 C 0.027 3.973 6 N -0.889 5.889 7 Si 0.933 3.067 8 H -0.273 1.273 9 H -0.283 1.283 10 H -0.273 1.273 11 C 0.457 3.543 12 O -0.582 6.582 13 C -0.121 4.121 14 H 0.121 0.879 15 C -0.106 4.106 16 C -0.136 4.136 17 C 0.107 3.893 18 H 0.119 0.881 19 C 0.442 3.558 20 F -0.181 7.181 21 F -0.175 7.175 22 F -0.176 7.176 23 N -0.721 5.721 24 C 0.550 3.450 25 O -0.515 6.515 26 H 0.023 0.977 27 H 0.079 0.921 28 H 0.065 0.935 29 H 0.267 0.733 30 H 0.082 0.918 31 H 0.093 0.907 32 H 0.088 0.912 33 H 0.101 0.899 34 H 0.402 0.598 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.526 -16.055 3.502 17.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.033 4.033 2 N -0.159 5.159 3 C -0.424 4.424 4 H 0.122 0.878 5 C -0.175 4.175 6 N -0.531 5.531 7 Si 0.760 3.240 8 H -0.198 1.198 9 H -0.209 1.209 10 H -0.198 1.198 11 C 0.243 3.757 12 O -0.466 6.466 13 C -0.146 4.146 14 H 0.138 0.862 15 C -0.144 4.144 16 C -0.173 4.173 17 C -0.001 4.001 18 H 0.137 0.863 19 C 0.386 3.614 20 F -0.163 7.163 21 F -0.157 7.157 22 F -0.157 7.157 23 N -0.377 5.377 24 C 0.336 3.664 25 O -0.387 6.387 26 H 0.041 0.959 27 H 0.097 0.903 28 H 0.083 0.917 29 H 0.077 0.923 30 H 0.101 0.899 31 H 0.111 0.889 32 H 0.107 0.893 33 H 0.120 0.880 34 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -3.921 -15.482 3.156 16.280 hybrid contribution 0.219 0.187 -0.325 0.434 sum -3.702 -15.295 2.831 15.990 Atomic orbital electron populations 1.21901 0.80359 0.96195 1.04869 1.43622 1.05976 1.04564 1.61789 1.19777 0.93565 0.81816 1.47273 0.87816 1.25302 0.95883 0.99745 0.96552 1.70105 1.06893 1.27332 1.48751 0.85879 0.78749 0.80207 0.79182 1.19849 1.20884 1.19822 1.18932 0.87607 0.83398 0.85775 1.90549 1.13933 1.86350 1.55781 1.21402 1.00646 0.95202 0.97326 0.86170 1.21572 1.03378 0.93669 0.95803 1.22048 0.96037 0.95732 1.03510 1.22113 0.98826 0.88274 0.90897 0.86334 1.21007 0.76309 0.89044 0.75017 1.93202 1.57496 1.76141 1.89448 1.93210 1.65093 1.96034 1.61342 1.93200 1.84797 1.86037 1.51664 1.45342 1.54305 1.10891 1.27140 1.19658 0.80670 0.81243 0.84800 1.90782 1.44808 1.75575 1.27585 0.95878 0.90267 0.91667 0.92267 0.89886 0.88863 0.89324 0.88010 0.76075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.38 8.72 59.84 0.52 2.90 16 2 N -0.44 -11.21 3.03 -122.19 -0.37 -11.58 16 3 C -0.30 -8.27 9.55 -14.93 -0.14 -8.41 16 4 H 0.10 3.06 7.20 -52.49 -0.38 2.68 16 5 C 0.03 0.70 5.42 -17.47 -0.09 0.60 16 6 N -0.89 -22.82 9.53 55.50 0.53 -22.29 16 7 Si 0.93 20.77 29.56 -169.99 -5.02 15.75 16 8 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 9 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 10 H -0.27 -6.07 7.11 56.52 0.40 -5.66 16 11 C 0.46 11.08 6.24 -10.98 -0.07 11.01 16 12 O -0.58 -16.46 15.75 -6.69 -0.11 -16.56 16 13 C -0.12 -2.16 1.99 -93.14 -0.19 -2.35 16 14 H 0.12 1.96 5.96 -51.93 -0.31 1.65 16 15 C -0.11 -1.39 5.32 -26.51 -0.14 -1.53 16 16 C -0.14 -1.26 5.03 -26.59 -0.13 -1.39 16 17 C 0.11 1.06 3.04 -68.38 -0.21 0.85 16 18 H 0.12 0.96 8.14 -51.93 -0.42 0.54 16 19 C 0.44 4.20 2.79 37.16 0.10 4.30 16 20 F -0.18 -1.82 16.87 2.25 0.04 -1.78 16 21 F -0.18 -1.89 16.60 2.25 0.04 -1.85 16 22 F -0.18 -1.58 16.92 2.25 0.04 -1.54 16 23 N -0.72 -9.67 5.04 -54.86 -0.28 -9.94 16 24 C 0.55 10.06 6.90 -11.87 -0.08 9.97 16 25 O -0.51 -11.88 16.91 -6.68 -0.11 -11.99 16 26 H 0.02 0.40 5.26 -51.93 -0.27 0.12 16 27 H 0.08 1.79 6.88 -51.93 -0.36 1.43 16 28 H 0.06 1.51 7.24 -51.93 -0.38 1.14 16 29 H 0.27 6.52 8.31 -40.82 -0.34 6.19 16 30 H 0.08 1.16 8.09 -51.93 -0.42 0.74 16 31 H 0.09 1.13 8.14 -51.93 -0.42 0.71 16 32 H 0.09 0.79 7.58 -51.93 -0.39 0.40 16 33 H 0.10 0.68 8.03 -51.93 -0.42 0.26 16 34 H 0.40 5.02 8.27 -40.82 -0.34 4.69 16 LS Contribution 295.64 15.07 4.46 4.46 Total: -1.00 -33.47 295.64 -4.46 -37.94 By element: Atomic # 1 Polarization: 6.68 SS G_CDS: -3.24 Total: 3.44 kcal Atomic # 6 Polarization: 16.39 SS G_CDS: -0.43 Total: 15.96 kcal Atomic # 7 Polarization: -43.70 SS G_CDS: -0.12 Total: -43.81 kcal Atomic # 8 Polarization: -28.34 SS G_CDS: -0.22 Total: -28.56 kcal Atomic # 9 Polarization: -5.28 SS G_CDS: 0.11 Total: -5.17 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -33.47 -4.46 -37.94 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263829220.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.233 kcal (2) G-P(sol) polarization free energy of solvation -33.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -202.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -207.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds