Wall clock time and date at job start Tue Mar 31 2020 03:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.46904 * 110.99941 * 2 1 4 4 C 1.46902 * 110.99884 * 123.95355 * 2 1 3 5 5 C 1.52996 * 109.47040 * 66.04246 * 4 2 1 6 6 C 1.53004 * 109.46911 * 179.97438 * 5 4 2 7 7 N 1.46498 * 109.47023 * 180.02562 * 6 5 4 8 8 C 1.46501 * 120.00063 * 270.00013 * 7 6 5 9 9 C 1.50696 * 109.47294 * 261.09133 * 8 7 6 10 10 H 1.07998 * 119.99781 * 4.03661 * 9 8 7 11 11 C 1.37884 * 120.00057 * 184.03184 * 9 8 7 12 12 N 1.31515 * 119.99906 * 184.93257 * 11 9 8 13 13 Si 1.86797 * 119.99877 * 4.93745 * 11 9 8 14 14 H 1.48502 * 109.47356 * 94.91919 * 13 11 9 15 15 H 1.48500 * 109.47081 * 214.91671 * 13 11 9 16 16 H 1.48504 * 109.47243 * 334.91921 * 13 11 9 17 17 C 1.34774 * 120.00158 * 89.99823 * 7 6 5 18 18 O 1.21633 * 119.99999 * 359.59978 * 17 7 6 19 19 C 1.47164 * 120.00244 * 179.59483 * 17 7 6 20 20 C 1.38405 * 126.88445 * 350.78708 * 19 17 7 21 21 C 1.39667 * 105.35976 * 180.02562 * 20 19 17 22 22 N 1.30860 * 107.86740 * 0.02562 * 21 20 19 23 23 N 1.28454 * 110.92266 * 359.97438 * 22 21 20 24 24 C 1.46493 * 125.18792 * 179.73274 * 23 22 21 25 25 H 1.09000 * 109.47029 * 296.04736 * 1 2 3 26 26 H 1.08998 * 109.47117 * 56.04429 * 1 2 3 27 27 H 1.08997 * 109.47424 * 176.04860 * 1 2 3 28 28 H 1.08999 * 109.46729 * 183.95359 * 3 2 1 29 29 H 1.08996 * 109.46974 * 303.95345 * 3 2 1 30 30 H 1.09001 * 109.46996 * 63.95467 * 3 2 1 31 31 H 1.09005 * 109.46982 * 306.04588 * 4 2 1 32 32 H 1.09000 * 109.47160 * 186.05005 * 4 2 1 33 33 H 1.09005 * 109.46954 * 60.00325 * 5 4 2 34 34 H 1.08996 * 109.47409 * 299.99741 * 5 4 2 35 35 H 1.08999 * 109.47168 * 60.00809 * 6 5 4 36 36 H 1.08999 * 109.47465 * 300.00250 * 6 5 4 37 37 H 1.09000 * 109.46940 * 21.09925 * 8 7 6 38 38 H 1.09010 * 109.47337 * 141.08933 * 8 7 6 39 39 H 0.96996 * 119.99796 * 180.02562 * 12 11 9 40 40 H 1.08005 * 127.31846 * 359.97438 * 20 19 17 41 41 H 1.08004 * 126.06640 * 179.97438 * 21 20 19 42 42 H 1.09004 * 109.47051 * 85.63891 * 24 23 22 43 43 H 1.09002 * 109.47263 * 205.63565 * 24 23 22 44 44 H 1.08998 * 109.47352 * 325.63821 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9954 -0.7660 1.1376 5 6 1.6313 -2.2426 0.9704 6 6 2.1802 -3.0404 2.1550 7 7 1.8321 -4.4544 1.9946 8 6 0.5757 -4.9667 2.5470 9 6 0.8454 -5.6406 3.8676 10 1 1.8401 -5.6263 4.2879 11 6 -0.1779 -6.2753 4.5394 12 7 0.0339 -6.7789 5.7357 13 14 -1.8648 -6.4199 3.7503 14 1 -1.9781 -7.7304 3.0609 15 1 -2.9119 -6.3199 4.7985 16 1 -2.0454 -5.3246 2.7639 17 6 2.6677 -5.2839 1.3388 18 8 3.7074 -4.8571 0.8737 19 6 2.3223 -6.7062 1.1854 20 6 1.2800 -7.3788 1.7992 21 6 1.3676 -8.6949 1.3400 22 7 2.3872 -8.7681 0.5231 23 7 2.9667 -7.6273 0.4093 24 6 4.1431 -7.3571 -0.4207 25 1 -0.3633 0.4513 0.9233 26 1 -0.3633 0.5740 -0.8524 27 1 -0.3634 -1.0252 -0.0708 28 1 3.0827 1.3432 -0.0709 29 1 1.5898 1.9163 -0.8524 30 1 1.7044 1.8724 0.9233 31 1 1.5610 -0.3872 2.0628 32 1 3.0797 -0.6611 1.1757 33 1 2.0657 -2.6213 0.0452 34 1 0.5471 -2.3474 0.9324 35 1 1.7462 -2.6619 3.0804 36 1 3.2645 -2.9356 2.1926 37 1 -0.1194 -4.1404 2.6958 38 1 0.1408 -5.6868 1.8537 39 1 -0.6859 -7.2257 6.2081 40 1 0.5538 -6.9724 2.4877 41 1 0.7108 -9.5082 1.6117 42 1 3.8255 -7.1335 -1.4392 43 1 4.6865 -6.5041 -0.0141 44 1 4.7925 -8.2324 -0.4266 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000130773094.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:41:44 Heat of formation + Delta-G solvation = 75.480803 kcal Electronic energy + Delta-G solvation = -24606.330003 eV Core-core repulsion = 21176.002497 eV Total energy + Delta-G solvation = -3430.327506 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 294.180 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.86589 -39.05332 -37.63464 -35.65917 -33.34104 -32.60076 -31.87340 -29.93295 -28.29762 -27.67734 -26.57656 -26.01180 -23.26698 -22.76269 -21.47916 -20.87653 -20.40351 -18.73149 -17.17211 -16.61343 -16.12010 -15.62761 -15.60098 -15.43723 -15.00239 -14.58612 -14.37337 -13.97131 -13.86910 -13.66429 -13.37034 -12.90087 -12.57672 -12.50999 -12.39681 -12.25737 -11.97492 -11.90473 -11.74306 -11.48363 -11.27796 -11.08112 -10.91281 -10.80536 -10.40364 -10.28043 -9.82734 -9.72931 -9.33766 -8.85226 -8.57673 -8.43333 -8.18771 -7.88597 -6.32757 -4.31586 1.97153 2.96075 3.10971 3.19045 3.22416 3.29107 3.70718 3.88482 4.02985 4.14937 4.96868 4.98483 5.05466 5.06171 5.11270 5.23588 5.30035 5.45549 5.47139 5.55109 5.56404 5.65995 5.69831 5.71867 5.77550 5.82660 5.89076 6.01634 6.06615 6.27248 6.35208 6.39614 6.49876 6.61031 6.77556 6.94794 6.97100 7.23677 7.26947 7.34848 7.40905 7.95994 8.26358 8.62264 8.74446 8.81390 9.21526 10.79183 Molecular weight = 294.18amu Principal moments of inertia in cm(-1) A = 0.011719 B = 0.005733 C = 0.004269 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2388.644518 B = 4882.810403 C = 6557.764785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.549 5.549 3 C 0.025 3.975 4 C 0.059 3.941 5 C -0.131 4.131 6 C 0.124 3.876 7 N -0.574 5.574 8 C 0.191 3.809 9 C -0.539 4.539 10 H 0.082 0.918 11 C 0.078 3.922 12 N -0.878 5.878 13 Si 0.853 3.147 14 H -0.264 1.264 15 H -0.279 1.279 16 H -0.260 1.260 17 C 0.598 3.402 18 O -0.573 6.573 19 C -0.047 4.047 20 C -0.171 4.171 21 C -0.026 4.026 22 N -0.291 5.291 23 N -0.273 5.273 24 C 0.087 3.913 25 H 0.025 0.975 26 H 0.064 0.936 27 H 0.073 0.927 28 H 0.067 0.933 29 H 0.065 0.935 30 H 0.024 0.976 31 H 0.036 0.964 32 H 0.076 0.924 33 H 0.073 0.927 34 H 0.064 0.936 35 H 0.080 0.920 36 H 0.078 0.922 37 H 0.037 0.963 38 H 0.044 0.956 39 H 0.269 0.731 40 H 0.212 0.788 41 H 0.178 0.822 42 H 0.073 0.927 43 H 0.113 0.887 44 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.815 8.563 -9.827 13.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 N -0.272 5.272 3 C -0.123 4.123 4 C -0.070 4.070 5 C -0.169 4.169 6 C 0.000 4.000 7 N -0.303 5.303 8 C 0.070 3.930 9 C -0.577 4.577 10 H 0.100 0.900 11 C -0.127 4.127 12 N -0.514 5.514 13 Si 0.678 3.322 14 H -0.189 1.189 15 H -0.204 1.204 16 H -0.184 1.184 17 C 0.386 3.614 18 O -0.456 6.456 19 C -0.173 4.173 20 C -0.197 4.197 21 C -0.202 4.202 22 N -0.124 5.124 23 N -0.062 5.062 24 C -0.054 4.054 25 H 0.044 0.956 26 H 0.083 0.917 27 H 0.091 0.909 28 H 0.086 0.914 29 H 0.084 0.916 30 H 0.042 0.958 31 H 0.054 0.946 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.082 0.918 35 H 0.099 0.901 36 H 0.097 0.903 37 H 0.055 0.945 38 H 0.062 0.938 39 H 0.080 0.920 40 H 0.228 0.772 41 H 0.195 0.805 42 H 0.092 0.908 43 H 0.131 0.869 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.123 7.774 -11.084 13.704 hybrid contribution -1.691 0.630 1.141 2.136 sum 0.432 8.404 -9.942 13.026 Atomic orbital electron populations 1.22443 0.87465 1.02675 1.00171 1.61969 1.08059 1.13512 1.43701 1.22369 1.00780 0.88959 1.00232 1.22073 1.00245 0.93683 0.90965 1.21973 1.01474 0.93464 1.00039 1.21303 1.01160 0.79931 0.97610 1.47533 1.21677 1.07918 1.53122 1.20470 0.81643 0.95955 0.94926 1.21304 0.98626 1.34999 1.02805 0.89958 1.24871 0.98190 0.94963 0.94632 1.69875 1.33348 1.36289 1.11874 0.87214 0.84729 0.80091 0.80132 1.18860 1.20427 1.18379 1.16826 0.82983 0.83595 0.77993 1.90642 1.25381 1.77601 1.51943 1.21230 0.99771 0.92777 1.03537 1.24405 1.00819 0.93261 1.01255 1.23623 0.98214 0.98606 0.99757 1.73022 1.10723 1.07184 1.21512 1.45450 1.22981 1.04694 1.33072 1.22228 0.84740 1.04098 0.94314 0.95626 0.91720 0.90851 0.91380 0.91604 0.95781 0.94577 0.90577 0.90842 0.91753 0.90121 0.90320 0.94483 0.93815 0.92039 0.77176 0.80462 0.90822 0.86915 0.89836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.32 60.06 0.56 0.78 16 2 N -0.55 -6.54 5.02 -251.26 -1.26 -7.80 16 3 C 0.02 0.24 9.57 60.07 0.57 0.81 16 4 C 0.06 0.73 4.96 -3.83 -0.02 0.71 16 5 C -0.13 -1.91 5.46 -26.73 -0.15 -2.05 16 6 C 0.12 2.08 5.36 -4.04 -0.02 2.06 16 7 N -0.57 -11.58 2.49 -176.43 -0.44 -12.02 16 8 C 0.19 4.10 3.76 -5.20 -0.02 4.08 16 9 C -0.54 -13.54 7.52 -34.44 -0.26 -13.79 16 10 H 0.08 2.36 8.06 -52.49 -0.42 1.94 16 11 C 0.08 2.00 5.03 -17.82 -0.09 1.91 16 12 N -0.88 -24.33 13.96 55.43 0.77 -23.56 16 13 Si 0.85 18.49 26.42 -169.99 -4.49 14.00 16 14 H -0.26 -5.54 7.11 56.52 0.40 -5.14 16 15 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 16 H -0.26 -5.29 6.63 56.52 0.37 -4.92 16 17 C 0.60 12.75 7.56 -12.64 -0.10 12.65 16 18 O -0.57 -12.34 14.18 5.25 0.07 -12.27 16 19 C -0.05 -1.01 6.78 -82.06 -0.56 -1.56 16 20 C -0.17 -3.72 8.16 -38.99 -0.32 -4.04 16 21 C -0.03 -0.52 12.03 -17.43 -0.21 -0.73 16 22 N -0.29 -5.77 11.90 30.59 0.36 -5.41 16 23 N -0.27 -5.33 3.75 -63.89 -0.24 -5.57 16 24 C 0.09 1.32 11.04 59.84 0.66 1.98 16 25 H 0.03 0.26 8.14 -51.93 -0.42 -0.16 16 26 H 0.06 0.60 8.12 -51.93 -0.42 0.18 16 27 H 0.07 0.84 6.47 -51.93 -0.34 0.50 16 28 H 0.07 0.61 8.12 -51.93 -0.42 0.19 16 29 H 0.07 0.55 8.12 -51.93 -0.42 0.13 16 30 H 0.02 0.22 8.14 -51.93 -0.42 -0.21 16 31 H 0.04 0.43 8.12 -51.93 -0.42 0.01 16 32 H 0.08 0.91 8.06 -51.93 -0.42 0.50 16 33 H 0.07 1.20 8.14 -51.93 -0.42 0.77 16 34 H 0.06 0.94 6.55 -51.93 -0.34 0.60 16 35 H 0.08 1.31 8.07 -51.93 -0.42 0.89 16 36 H 0.08 1.34 7.42 -51.93 -0.39 0.95 16 37 H 0.04 0.76 7.57 -51.93 -0.39 0.37 16 38 H 0.04 0.95 4.40 -51.92 -0.23 0.72 16 39 H 0.27 6.99 8.31 -40.82 -0.34 6.65 16 40 H 0.21 4.82 1.60 -52.48 -0.08 4.74 16 41 H 0.18 2.98 8.06 -52.48 -0.42 2.55 16 42 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 43 H 0.11 1.80 5.93 -51.93 -0.31 1.49 16 44 H 0.08 1.07 8.14 -51.93 -0.42 0.64 16 LS Contribution 348.81 15.07 5.26 5.26 Total: -1.00 -29.68 348.81 -6.62 -36.30 By element: Atomic # 1 Polarization: 14.98 SS G_CDS: -6.72 Total: 8.26 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: 0.06 Total: 2.81 kcal Atomic # 7 Polarization: -53.56 SS G_CDS: -0.80 Total: -54.36 kcal Atomic # 8 Polarization: -12.34 SS G_CDS: 0.07 Total: -12.27 kcal Atomic # 14 Polarization: 18.49 SS G_CDS: -4.49 Total: 14.00 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -29.68 -6.62 -36.30 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000130773094.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.778 kcal (2) G-P(sol) polarization free energy of solvation -29.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 82.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.621 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.298 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds