Wall clock time and date at job start Tue Mar 31 2020 04:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.33715 * 126.95592 * 2 1 4 4 N 1.20556 * 113.56337 * 179.97438 * 3 2 1 5 5 C 1.30796 * 112.72014 * 0.02562 * 4 3 2 6 6 C 1.48160 * 127.43314 * 179.97438 * 5 4 3 7 7 C 1.39552 * 120.14768 * 128.99756 * 6 5 4 8 8 Cl 1.73597 * 120.07216 * 359.97438 * 7 6 5 9 9 C 1.38118 * 119.85066 * 179.97438 * 7 6 5 10 10 C 1.38320 * 120.14873 * 0.25995 * 9 7 6 11 11 C 1.38332 * 120.29462 * 359.48069 * 10 9 7 12 12 C 1.38115 * 120.14349 * 0.51686 * 11 10 9 13 13 Cl 1.73606 * 120.07292 * 179.71891 * 12 11 10 14 14 C 1.39576 * 126.95277 * 180.33635 * 2 1 3 15 15 C 1.41225 * 128.75788 * 359.97438 * 14 2 1 16 16 H 1.08001 * 119.99312 * 311.91366 * 15 14 2 17 17 C 1.39809 * 120.00342 * 131.90921 * 15 14 2 18 18 N 1.30974 * 120.00056 * 173.25468 * 17 15 14 19 19 Si 1.86800 * 119.99819 * 353.25941 * 17 15 14 20 20 H 1.48501 * 109.46808 * 95.33303 * 19 17 15 21 21 H 1.48495 * 109.46937 * 215.32818 * 19 17 15 22 22 H 1.48499 * 109.47293 * 335.32896 * 19 17 15 23 23 H 1.08998 * 109.46755 * 4.96438 * 1 2 3 24 24 H 1.09002 * 109.47014 * 124.96308 * 1 2 3 25 25 H 1.09000 * 109.46970 * 244.96669 * 1 2 3 26 26 H 1.08006 * 119.92299 * 179.97438 * 9 7 6 27 27 H 1.08002 * 119.85501 * 179.74758 * 10 9 7 28 28 H 1.07998 * 119.92701 * 180.25989 * 11 10 9 29 29 H 0.96999 * 119.99989 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.3109 1.0685 0.0000 4 7 3.4836 0.7893 0.0005 5 6 3.6956 -0.5014 0.0004 6 6 5.0025 -1.1994 0.0003 7 6 5.2630 -2.1995 0.9381 8 17 4.0560 -2.6293 2.1094 9 6 6.4832 -2.8465 0.9322 10 6 7.4480 -2.5015 0.0030 11 6 7.1943 -1.5148 -0.9328 12 6 5.9783 -0.8599 -0.9379 13 17 5.6647 0.3832 -2.1084 14 6 2.3460 -1.1154 -0.0065 15 6 1.9975 -2.4839 -0.0141 16 1 1.2590 -2.8568 0.6802 17 6 2.6083 -3.3559 -0.9202 18 7 2.3853 -4.6441 -0.8413 19 14 3.7425 -2.6837 -2.2435 20 1 5.1497 -2.7617 -1.7756 21 1 3.5878 -3.4870 -3.4828 22 1 3.3918 -1.2683 -2.5240 23 1 -0.3633 1.0238 -0.0889 24 1 -0.3633 -0.5889 -0.8422 25 1 -0.3633 -0.4349 0.9311 26 1 6.6862 -3.6205 1.6577 27 1 8.4020 -3.0078 0.0052 28 1 7.9504 -1.2531 -1.6582 29 1 2.8094 -5.2492 -1.4697 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000000139524.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:05:45 Heat of formation + Delta-G solvation = 69.417221 kcal Electronic energy + Delta-G solvation = -19903.446052 eV Core-core repulsion = 16653.618669 eV Total energy + Delta-G solvation = -3249.827383 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 297.006 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.15147 -39.12950 -36.24560 -35.62490 -34.21564 -32.70596 -31.87126 -30.34468 -29.81224 -27.55305 -25.31218 -23.33294 -22.43329 -20.81663 -19.12215 -17.58020 -16.86193 -16.39356 -15.67377 -15.32378 -15.09557 -14.60881 -14.01722 -13.96374 -13.35687 -12.98826 -12.29666 -12.27151 -12.11514 -11.93677 -11.55484 -11.54693 -11.16057 -10.81332 -10.79164 -10.59185 -10.52339 -10.19798 -10.04958 -9.78405 -9.30317 -8.86096 -8.32763 -7.96717 -7.61453 -6.64614 -4.39723 1.19530 1.31456 2.30911 2.73929 2.83753 3.08697 3.24158 3.32956 3.44113 3.82673 4.13698 4.46227 4.76434 4.96011 5.01384 5.22649 5.36342 5.65720 5.71863 5.83993 6.17490 6.21909 6.35237 6.38488 6.40517 6.58688 6.71764 6.82137 6.98590 7.06645 7.53531 8.35051 8.56923 8.95985 9.62164 10.37727 Molecular weight = 297.01amu Principal moments of inertia in cm(-1) A = 0.013775 B = 0.010821 C = 0.008990 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2032.131447 B = 2587.046436 C = 3113.707414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.026 4.026 2 C -0.199 4.199 3 O 0.098 5.902 4 N -0.355 5.355 5 C -0.033 4.033 6 C 0.027 3.973 7 C 0.007 3.993 8 Cl -0.020 7.020 9 C -0.115 4.115 10 C -0.100 4.100 11 C -0.119 4.119 12 C -0.014 4.014 13 Cl -0.055 7.055 14 C 0.030 3.970 15 C -0.436 4.436 16 H 0.095 0.905 17 C 0.105 3.895 18 N -0.831 5.831 19 Si 0.843 3.157 20 H -0.246 1.246 21 H -0.287 1.287 22 H -0.244 1.244 23 H 0.055 0.945 24 H 0.070 0.930 25 H 0.063 0.937 26 H 0.138 0.862 27 H 0.137 0.863 28 H 0.135 0.865 29 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.919 2.824 0.996 7.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C -0.261 4.261 3 O 0.021 5.979 4 N -0.053 5.053 5 C -0.190 4.190 6 C 0.025 3.975 7 C -0.022 4.022 8 Cl 0.009 6.991 9 C -0.134 4.134 10 C -0.119 4.119 11 C -0.137 4.137 12 C -0.042 4.042 13 Cl -0.026 7.026 14 C 0.025 3.975 15 C -0.467 4.467 16 H 0.113 0.887 17 C -0.110 4.110 18 N -0.459 5.459 19 Si 0.667 3.333 20 H -0.170 1.170 21 H -0.214 1.214 22 H -0.167 1.167 23 H 0.074 0.926 24 H 0.088 0.912 25 H 0.082 0.918 26 H 0.156 0.844 27 H 0.155 0.845 28 H 0.153 0.847 29 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 7.625 3.681 0.930 8.518 hybrid contribution 0.191 -0.640 -0.824 1.061 sum 7.816 3.040 0.106 8.387 Atomic orbital electron populations 1.19646 0.85590 1.00998 1.02152 1.24377 0.94470 0.85442 1.21811 1.84121 1.10824 1.34327 1.68651 1.73497 0.97044 1.16801 1.17931 1.22721 0.93973 0.90287 1.11970 1.17296 0.90695 0.95399 0.94119 1.20897 0.91381 0.96263 0.93645 1.98410 1.54194 1.91523 1.54940 1.21060 0.91880 1.00191 1.00287 1.20984 0.99306 0.97057 0.94568 1.20921 0.95446 0.97110 1.00273 1.20876 0.95253 0.94395 0.93689 1.98361 1.95817 1.51821 1.56630 1.19699 0.86366 0.94747 0.96697 1.18127 1.22725 0.87909 1.17969 0.88741 1.25527 0.94303 0.94045 0.97115 1.69644 1.38961 1.02859 1.34437 0.87371 0.82984 0.81662 0.81248 1.17022 1.21412 1.16665 0.92604 0.91159 0.91810 0.84382 0.84528 0.84737 0.91229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.03 -0.47 10.34 36.00 0.37 -0.09 15 2 C -0.20 -4.49 7.64 -33.81 -0.26 -4.75 15 3 O 0.10 2.25 11.04 18.12 0.20 2.45 15 4 N -0.35 -8.42 11.27 34.76 0.39 -8.03 15 5 C -0.03 -0.79 4.28 -80.11 -0.34 -1.14 15 6 C 0.03 0.60 3.07 -104.84 -0.32 0.28 15 7 C 0.01 0.14 5.95 -39.14 -0.23 -0.10 15 8 Cl -0.02 -0.42 25.27 -51.86 -1.31 -1.73 15 9 C -0.12 -1.90 9.82 -39.60 -0.39 -2.29 15 10 C -0.10 -1.46 10.04 -39.52 -0.40 -1.86 15 11 C -0.12 -1.92 9.20 -39.59 -0.36 -2.28 15 12 C -0.01 -0.28 3.89 -39.13 -0.15 -0.43 15 13 Cl -0.06 -1.09 26.35 -51.86 -1.37 -2.45 15 14 C 0.03 0.75 4.30 -104.14 -0.45 0.30 15 15 C -0.44 -11.29 7.62 -37.86 -0.29 -11.58 15 16 H 0.09 2.60 8.06 -52.49 -0.42 2.18 15 17 C 0.10 2.74 5.52 -17.33 -0.10 2.64 15 18 N -0.83 -22.22 13.94 55.54 0.77 -21.45 15 19 Si 0.84 20.50 22.39 -169.99 -3.81 16.70 15 20 H -0.25 -5.64 4.41 56.52 0.25 -5.39 15 21 H -0.29 -7.03 7.11 56.52 0.40 -6.63 15 22 H -0.24 -6.21 6.33 56.52 0.36 -5.85 15 23 H 0.05 0.84 8.14 -51.93 -0.42 0.42 15 24 H 0.07 1.24 8.14 -51.93 -0.42 0.82 15 25 H 0.06 1.08 8.14 -51.93 -0.42 0.65 15 26 H 0.14 1.89 8.06 -52.48 -0.42 1.46 15 27 H 0.14 1.42 8.06 -52.49 -0.42 1.00 15 28 H 0.13 1.76 8.06 -52.49 -0.42 1.33 15 29 H 0.28 6.98 8.30 -40.82 -0.34 6.64 15 LS Contribution 274.72 15.07 4.14 4.14 Total: -1.00 -28.85 274.72 -6.18 -35.04 By element: Atomic # 1 Polarization: -1.07 SS G_CDS: -2.29 Total: -3.36 kcal Atomic # 6 Polarization: -18.38 SS G_CDS: -2.92 Total: -21.30 kcal Atomic # 7 Polarization: -30.64 SS G_CDS: 1.17 Total: -29.48 kcal Atomic # 8 Polarization: 2.25 SS G_CDS: 0.20 Total: 2.45 kcal Atomic # 14 Polarization: 20.50 SS G_CDS: -3.81 Total: 16.70 kcal Atomic # 17 Polarization: -1.51 SS G_CDS: -2.68 Total: -4.19 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -28.85 -6.18 -35.04 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000000139524.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.455 kcal (2) G-P(sol) polarization free energy of solvation -28.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.038 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds