Wall clock time and date at job start Tue Mar 31 2020 03:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38159 * 119.98024 * 2 1 4 4 C 1.38701 * 119.95761 * 180.02562 * 3 2 1 5 5 O 1.35924 * 120.04343 * 180.02562 * 4 3 2 6 6 C 1.42896 * 117.00075 * 180.02562 * 5 4 3 7 7 C 1.50707 * 109.46884 * 180.02562 * 6 5 4 8 8 O 1.21282 * 120.00095 * 359.97438 * 7 6 5 9 9 N 1.34780 * 119.99755 * 180.02562 * 7 6 5 10 10 C 1.46504 * 119.99880 * 359.97438 * 9 7 6 11 11 C 1.46498 * 119.99981 * 179.97438 * 9 7 6 12 12 C 1.50698 * 109.47486 * 89.99421 * 11 9 7 13 13 H 1.08000 * 119.99722 * 359.97438 * 12 11 9 14 14 C 1.37872 * 120.00170 * 180.02562 * 12 11 9 15 15 N 1.31520 * 120.00005 * 359.97438 * 14 12 11 16 16 Si 1.86795 * 120.00080 * 180.02562 * 14 12 11 17 17 H 1.48497 * 109.47347 * 59.99733 * 16 14 12 18 18 H 1.48507 * 109.47268 * 179.97438 * 16 14 12 19 19 H 1.48504 * 109.47188 * 299.99661 * 16 14 12 20 20 C 1.38738 * 119.91880 * 359.97438 * 4 3 2 21 21 C 1.38126 * 119.95522 * 359.97438 * 20 4 3 22 22 C 1.38345 * 119.97676 * 179.97438 * 2 1 3 23 23 Cl 1.73605 * 119.95979 * 359.72660 * 22 2 1 24 24 H 1.08998 * 109.47135 * 270.02403 * 1 2 3 25 25 H 1.08999 * 109.46850 * 30.02744 * 1 2 3 26 26 H 1.08997 * 109.47106 * 150.02405 * 1 2 3 27 27 H 1.08001 * 120.02301 * 359.97434 * 3 2 1 28 28 H 1.08997 * 109.47009 * 299.99128 * 6 5 4 29 29 H 1.08993 * 109.47480 * 59.99649 * 6 5 4 30 30 H 1.09004 * 109.46545 * 90.00927 * 10 9 7 31 31 H 1.08998 * 109.47031 * 210.00169 * 10 9 7 32 32 H 1.08996 * 109.47187 * 330.00779 * 10 9 7 33 33 H 1.09000 * 109.47059 * 210.00110 * 11 9 7 34 34 H 1.09005 * 109.46992 * 329.99394 * 11 9 7 35 35 H 0.96996 * 119.99773 * 180.02562 * 15 14 12 36 36 H 1.07998 * 120.02532 * 179.97438 * 20 4 3 37 37 H 1.07994 * 119.98203 * 180.02562 * 21 20 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1974 1.1967 0.0000 4 6 3.5844 1.1962 -0.0005 5 8 4.2654 2.3725 0.0000 6 6 5.6923 2.2961 -0.0012 7 6 6.2698 3.6881 0.0002 8 8 5.5321 4.6508 0.0016 9 7 7.6062 3.8632 -0.0010 10 6 8.4973 2.7003 -0.0033 11 6 8.1677 5.2163 -0.0002 12 6 8.3617 5.6789 1.4208 13 1 8.0932 5.0300 2.2413 14 6 8.8810 6.9308 1.6735 15 7 9.2075 7.7212 0.6743 16 14 9.1221 7.5039 3.4349 17 1 10.0538 6.5817 4.1324 18 1 9.6912 8.8756 3.4357 19 1 7.8136 7.5100 4.1370 20 6 4.2759 -0.0066 -0.0005 21 6 3.5822 -1.2010 0.0005 22 6 2.1982 -1.1984 0.0005 23 17 1.3286 -2.7009 0.0084 24 1 -0.3633 0.0004 1.0276 25 1 -0.3633 0.8897 -0.5143 26 1 -0.3633 -0.8902 -0.5134 27 1 1.6574 2.1321 -0.0004 28 1 6.0283 1.7629 0.8881 29 1 6.0270 1.7644 -0.8918 30 1 8.7173 2.4132 -1.0316 31 1 9.4253 2.9527 0.5098 32 1 8.0124 1.8700 0.5101 33 1 9.1284 5.2113 -0.5151 34 1 7.4844 5.8935 -0.5127 35 1 9.5732 8.6019 0.8521 36 1 5.3559 -0.0090 -0.0014 37 1 4.1200 -2.1375 0.0010 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000034651616.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:22:30 Heat of formation + Delta-G solvation = -54.775317 kcal Electronic energy + Delta-G solvation = -20842.832851 eV Core-core repulsion = 17418.577100 eV Total energy + Delta-G solvation = -3424.255751 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 297.092 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.50560 -39.06434 -37.74266 -36.36395 -34.91446 -32.90065 -32.70125 -30.66040 -28.87159 -27.40487 -26.99858 -25.69182 -22.97513 -22.89442 -21.39316 -18.79684 -18.13065 -16.73893 -16.68994 -16.66527 -16.13832 -15.75673 -15.26823 -14.61627 -14.53555 -14.28773 -14.01145 -13.57026 -13.36249 -12.75297 -12.67613 -12.51888 -12.37364 -12.26390 -12.23192 -11.95449 -11.77369 -11.43938 -11.25437 -10.96673 -10.88584 -10.74384 -10.61897 -10.20606 -9.71271 -9.13661 -9.04695 -8.47679 -8.28882 -7.78817 -6.08963 -4.14347 0.95523 1.03010 1.96165 2.78973 3.19402 3.29719 3.34405 3.36309 3.38386 3.99006 4.40509 4.46199 4.48094 4.73594 4.87404 5.01120 5.02715 5.10675 5.12492 5.25817 5.32547 5.35803 5.49530 5.63229 5.68830 5.78894 5.86779 6.03884 6.08247 6.09248 6.33367 6.90022 7.21216 7.34598 7.42773 7.86530 8.16025 8.23221 8.80197 8.94598 9.50863 10.99220 Molecular weight = 297.09amu Principal moments of inertia in cm(-1) A = 0.031328 B = 0.002702 C = 0.002638 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 893.566853 B =10361.635135 C =10612.067061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.035 4.035 3 C -0.143 4.143 4 C 0.148 3.852 5 O -0.282 6.282 6 C 0.040 3.960 7 C 0.506 3.494 8 O -0.517 6.517 9 N -0.598 5.598 10 C 0.079 3.921 11 C 0.247 3.753 12 C -0.531 4.531 13 H 0.057 0.943 14 C 0.062 3.938 15 N -0.894 5.894 16 Si 0.900 3.100 17 H -0.277 1.277 18 H -0.286 1.286 19 H -0.276 1.276 20 C -0.208 4.208 21 C -0.064 4.064 22 C -0.082 4.082 23 Cl -0.075 7.075 24 H 0.078 0.922 25 H 0.074 0.926 26 H 0.075 0.925 27 H 0.142 0.858 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.048 0.952 31 H 0.079 0.921 32 H 0.055 0.945 33 H 0.036 0.964 34 H 0.046 0.954 35 H 0.265 0.735 36 H 0.138 0.862 37 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.149 -20.750 -2.717 23.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.036 4.036 3 C -0.161 4.161 4 C 0.101 3.899 5 O -0.194 6.194 6 C -0.038 4.038 7 C 0.290 3.710 8 O -0.392 6.392 9 N -0.332 5.332 10 C -0.065 4.065 11 C 0.128 3.872 12 C -0.569 4.569 13 H 0.076 0.924 14 C -0.140 4.140 15 N -0.533 5.533 16 Si 0.727 3.273 17 H -0.202 1.202 18 H -0.211 1.211 19 H -0.201 1.201 20 C -0.227 4.227 21 C -0.082 4.082 22 C -0.108 4.108 23 Cl -0.047 7.047 24 H 0.097 0.903 25 H 0.093 0.907 26 H 0.094 0.906 27 H 0.160 0.840 28 H 0.107 0.893 29 H 0.106 0.894 30 H 0.067 0.933 31 H 0.098 0.902 32 H 0.073 0.927 33 H 0.054 0.946 34 H 0.064 0.936 35 H 0.074 0.926 36 H 0.156 0.844 37 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -11.593 -19.946 -2.768 23.236 hybrid contribution 0.537 -0.044 1.014 1.148 sum -11.055 -19.990 -1.754 22.911 Atomic orbital electron populations 1.20895 0.89863 1.03674 1.03197 1.19516 0.96679 0.90463 0.96974 1.20278 0.90932 0.98390 1.06540 1.19173 0.91981 0.84959 0.93780 1.86230 1.18943 1.26783 1.87404 1.22746 0.79337 0.98693 1.03065 1.19678 0.83226 0.89154 0.78928 1.90728 1.58447 1.41613 1.48415 1.48101 1.03964 1.09581 1.71574 1.21719 0.95962 0.88106 1.00730 1.19355 0.94095 0.76017 0.97729 1.21377 1.42556 1.00838 0.92160 0.92447 1.24936 0.95281 0.96257 0.97567 1.69920 1.43118 1.09370 1.30871 0.86535 0.78519 0.77745 0.84495 1.20222 1.21112 1.20103 1.21236 1.00730 0.91432 1.09306 1.20783 0.91785 0.98466 0.97191 1.20608 0.92228 0.86529 1.11459 1.98338 1.76854 1.32246 1.97235 0.90336 0.90728 0.90639 0.83984 0.89312 0.89434 0.93321 0.90207 0.92663 0.94580 0.93636 0.92556 0.84431 0.84703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.96 9.61 36.01 0.35 -0.61 16 2 C -0.04 -0.37 5.88 -104.61 -0.62 -0.99 16 3 C -0.14 -1.71 9.64 -39.44 -0.38 -2.09 16 4 C 0.15 1.95 6.69 -39.23 -0.26 1.69 16 5 O -0.28 -4.59 9.67 -39.41 -0.38 -4.97 16 6 C 0.04 0.59 3.77 36.01 0.14 0.72 16 7 C 0.51 10.45 7.75 -10.98 -0.09 10.36 16 8 O -0.52 -13.36 16.08 -14.35 -0.23 -13.60 16 9 N -0.60 -12.24 2.86 -182.95 -0.52 -12.76 16 10 C 0.08 1.13 10.24 59.85 0.61 1.74 16 11 C 0.25 6.33 5.16 -5.20 -0.03 6.31 16 12 C -0.53 -14.86 9.39 -34.44 -0.32 -15.18 16 13 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 14 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 15 N -0.89 -26.33 13.29 55.43 0.74 -25.60 16 16 Si 0.90 21.68 29.54 -169.99 -5.02 16.66 16 17 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 18 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 19 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 20 C -0.21 -2.23 9.04 -39.44 -0.36 -2.58 16 21 C -0.06 -0.62 9.82 -39.57 -0.39 -1.01 16 22 C -0.08 -0.84 6.31 -39.48 -0.25 -1.09 16 23 Cl -0.08 -0.69 27.29 -51.86 -1.42 -2.11 16 24 H 0.08 0.57 8.14 -51.93 -0.42 0.14 16 25 H 0.07 0.52 8.08 -51.93 -0.42 0.10 16 26 H 0.07 0.56 6.90 -51.93 -0.36 0.21 16 27 H 0.14 1.62 8.06 -52.49 -0.42 1.19 16 28 H 0.09 1.08 6.92 -51.93 -0.36 0.72 16 29 H 0.09 1.00 7.63 -51.93 -0.40 0.60 16 30 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 31 H 0.08 1.19 8.07 -51.93 -0.42 0.77 16 32 H 0.05 0.61 6.44 -51.93 -0.33 0.27 16 33 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 34 H 0.05 1.32 7.42 -51.93 -0.39 0.94 16 35 H 0.26 7.37 8.31 -40.82 -0.34 7.03 16 36 H 0.14 1.18 6.30 -52.49 -0.33 0.85 16 37 H 0.14 1.02 8.06 -52.49 -0.42 0.60 16 LS Contribution 333.16 15.07 5.02 5.02 Total: -1.00 -33.68 333.16 -8.16 -41.84 By element: Atomic # 1 Polarization: 1.25 SS G_CDS: -4.66 Total: -3.41 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -1.69 Total: -1.08 kcal Atomic # 7 Polarization: -38.57 SS G_CDS: 0.21 Total: -38.36 kcal Atomic # 8 Polarization: -17.95 SS G_CDS: -0.61 Total: -18.57 kcal Atomic # 14 Polarization: 21.68 SS G_CDS: -5.02 Total: 16.66 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.42 Total: -2.11 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -33.68 -8.16 -41.84 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000034651616.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.936 kcal (2) G-P(sol) polarization free energy of solvation -33.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.775 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds