Wall clock time and date at job start Tue Mar 31 2020 03:19:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.38546 * 119.94969 * 2 1 4 4 N 1.33544 * 133.89655 * 359.97438 * 3 2 1 5 5 C 1.30872 * 109.80849 * 180.02562 * 4 3 2 6 6 C 1.50699 * 125.14373 * 180.02562 * 5 4 3 7 7 Cl 1.80300 * 109.47087 * 270.01698 * 6 5 4 8 8 N 1.34727 * 109.70581 * 359.97438 * 5 4 3 9 9 C 1.46508 * 126.50168 * 179.97438 * 8 5 4 10 10 C 1.50693 * 109.47347 * 270.04801 * 9 8 5 11 11 H 1.08004 * 120.00127 * 359.97438 * 10 9 8 12 12 C 1.37880 * 120.00359 * 180.02562 * 10 9 8 13 13 N 1.31515 * 120.00159 * 179.97438 * 12 10 9 14 14 Si 1.86796 * 119.99583 * 359.97438 * 12 10 9 15 15 H 1.48506 * 109.47107 * 90.00205 * 14 12 10 16 16 H 1.48503 * 109.47112 * 210.00056 * 14 12 10 17 17 H 1.48501 * 109.47530 * 330.00317 * 14 12 10 18 18 C 1.38043 * 106.99584 * 0.02562 * 8 5 4 19 19 C 1.41163 * 134.59591 * 179.97438 * 18 8 5 20 20 O 1.21787 * 120.38557 * 0.03006 * 19 18 8 21 21 N 1.34928 * 119.22468 * 180.02562 * 19 18 8 22 22 H 0.96998 * 119.50789 * 179.97438 * 21 19 18 23 23 C 1.34423 * 120.99270 * 0.02562 * 21 19 18 24 24 O 1.21603 * 119.16674 * 180.02562 * 23 21 19 25 25 H 1.09004 * 109.46654 * 90.00302 * 1 2 3 26 26 H 1.09003 * 109.46782 * 209.99675 * 1 2 3 27 27 H 1.08998 * 109.47393 * 329.99958 * 1 2 3 28 28 H 1.08999 * 109.47593 * 30.01943 * 6 5 4 29 29 H 1.09000 * 109.46623 * 150.02287 * 6 5 4 30 30 H 1.08999 * 109.46599 * 30.04864 * 9 8 5 31 31 H 1.09002 * 109.47001 * 150.04058 * 9 8 5 32 32 H 0.96994 * 119.99620 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1567 1.2005 0.0000 4 7 1.7851 2.4832 -0.0004 5 6 2.8444 3.2517 -0.0007 6 6 2.8229 4.7586 -0.0007 7 17 2.8133 5.3595 -1.7006 8 7 3.9570 2.4919 0.0000 9 6 5.3408 2.9729 -0.0005 10 6 5.8149 3.1374 -1.4214 11 1 5.1519 2.9064 -2.2421 12 6 7.0955 3.5819 -1.6739 13 7 7.5093 3.7250 -2.9140 14 14 8.2424 3.9808 -0.2545 15 1 9.0056 2.7638 0.1222 16 1 9.1872 5.0497 -0.6670 17 1 7.4463 4.4459 0.9096 18 6 3.5456 1.1741 0.0003 19 6 4.2098 -0.0715 0.0006 20 8 5.4267 -0.1207 0.0012 21 7 3.4808 -1.2068 0.0003 22 1 3.9329 -2.0649 0.0001 23 6 2.1371 -1.1666 -0.0008 24 8 1.5130 -2.2102 -0.0006 25 1 -0.3633 -0.0001 -1.0277 26 1 -0.3633 -0.8901 0.5138 27 1 -0.3634 0.8899 0.5138 28 1 1.9282 5.1092 0.5137 29 1 3.7080 5.1345 0.5125 30 1 5.3919 3.9329 0.5130 31 1 5.9764 2.2517 0.5135 32 1 8.4100 4.0380 -3.0916 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000036047738.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:19:19 Heat of formation + Delta-G solvation = 8.886159 kcal Electronic energy + Delta-G solvation = -22291.751670 eV Core-core repulsion = 18701.290233 eV Total energy + Delta-G solvation = -3590.461437 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 298.062 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -42.78294 -40.80768 -38.75724 -36.35830 -35.70712 -34.65456 -34.11154 -32.33074 -31.14497 -28.51177 -27.86692 -26.64805 -23.96812 -23.00765 -22.61094 -20.14520 -19.07453 -18.58528 -17.47197 -17.42912 -16.78583 -15.94065 -15.49713 -15.34974 -15.25946 -14.47222 -14.27820 -14.14892 -13.76136 -13.60215 -13.40006 -12.93432 -12.63232 -12.46751 -12.31720 -11.60499 -11.18372 -10.90880 -10.76656 -10.51221 -10.26309 -10.21007 -10.15088 -10.10328 -9.90007 -9.77567 -9.16321 -8.84231 -7.85026 -6.33005 -4.38198 1.11834 1.95449 2.07613 2.19593 2.82549 3.09658 3.14604 3.15759 3.19469 3.28995 3.66219 4.01784 4.15078 4.53837 4.65041 4.93168 5.06663 5.14330 5.25485 5.37403 5.54049 5.61785 5.69963 6.02810 6.15618 6.26809 6.36690 6.77111 7.10217 7.16770 7.28133 7.61362 7.75692 8.13587 8.14797 8.69013 9.19992 10.78970 Molecular weight = 298.06amu Principal moments of inertia in cm(-1) A = 0.015178 B = 0.006731 C = 0.005081 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1844.385113 B = 4158.867554 C = 5509.523740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.508 5.508 3 C 0.291 3.709 4 N -0.487 5.487 5 C 0.252 3.748 6 C 0.048 3.952 7 Cl -0.136 7.136 8 N -0.350 5.350 9 C 0.197 3.803 10 C -0.538 4.538 11 H 0.085 0.915 12 C 0.088 3.912 13 N -0.878 5.878 14 Si 0.869 3.131 15 H -0.269 1.269 16 H -0.279 1.279 17 H -0.266 1.266 18 C -0.127 4.127 19 C 0.591 3.409 20 O -0.490 6.490 21 N -0.655 5.655 22 H 0.435 0.565 23 C 0.714 3.286 24 O -0.552 6.552 25 H 0.069 0.931 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.124 0.876 29 H 0.116 0.884 30 H 0.053 0.947 31 H 0.061 0.939 32 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.154 -0.856 8.531 14.069 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.238 5.238 3 C 0.058 3.942 4 N -0.213 5.213 5 C -0.011 4.011 6 C -0.016 4.016 7 Cl -0.110 7.110 8 N -0.027 5.027 9 C 0.078 3.922 10 C -0.575 4.575 11 H 0.103 0.897 12 C -0.117 4.117 13 N -0.514 5.514 14 Si 0.695 3.305 15 H -0.194 1.194 16 H -0.204 1.204 17 H -0.190 1.190 18 C -0.248 4.248 19 C 0.384 3.616 20 O -0.362 6.362 21 N -0.325 5.325 22 H 0.278 0.722 23 C 0.415 3.585 24 O -0.427 6.427 25 H 0.087 0.913 26 H 0.107 0.893 27 H 0.108 0.892 28 H 0.143 0.857 29 H 0.134 0.866 30 H 0.070 0.930 31 H 0.079 0.921 32 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -11.317 -0.860 8.278 14.048 hybrid contribution 1.749 -0.373 0.386 1.830 sum -9.567 -1.234 8.664 12.966 Atomic orbital electron populations 1.21877 0.74825 1.04487 1.03560 1.43598 1.08444 1.00916 1.70810 1.17921 0.87045 0.87134 1.02113 1.69433 1.28734 0.98132 1.24962 1.22664 0.80429 0.94823 1.03197 1.22361 1.07051 0.85110 0.87112 1.98776 1.99378 1.88258 1.24544 1.45124 1.09929 1.02695 1.44908 1.20579 0.73735 0.96281 1.01567 1.20845 1.00061 1.47636 0.88984 0.89693 1.24694 0.97152 0.94232 0.95659 1.69843 1.18537 1.44438 1.18541 0.86979 0.81838 0.79121 0.82594 1.19440 1.20385 1.19048 1.18734 0.92952 0.87514 1.25631 1.15519 0.86788 0.82632 0.76701 1.90994 1.12161 1.86794 1.46266 1.44056 1.06195 1.11708 1.70539 0.72207 1.15423 0.81567 0.83315 0.78202 1.91030 1.66058 1.29489 1.56101 0.91259 0.89321 0.89233 0.85742 0.86555 0.92984 0.92131 0.91969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.05 10.39 59.85 0.62 1.67 16 2 N -0.51 -7.59 3.06 -128.31 -0.39 -7.99 16 3 C 0.29 4.99 7.63 -154.56 -1.18 3.81 16 4 N -0.49 -8.15 11.16 -9.56 -0.11 -8.26 16 5 C 0.25 4.30 7.23 -155.39 -1.12 3.17 16 6 C 0.05 0.66 6.94 36.01 0.25 0.91 16 7 Cl -0.14 -2.24 29.13 -51.86 -1.51 -3.75 16 8 N -0.35 -6.92 2.76 -112.37 -0.31 -7.23 16 9 C 0.20 4.28 4.54 -5.19 -0.02 4.25 16 10 C -0.54 -13.99 9.94 -34.44 -0.34 -14.34 16 11 H 0.09 2.52 8.06 -52.48 -0.42 2.09 16 12 C 0.09 2.36 5.47 -17.82 -0.10 2.26 16 13 N -0.88 -25.26 13.96 55.43 0.77 -24.48 16 14 Si 0.87 19.55 27.47 -169.99 -4.67 14.88 16 15 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 16 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 17 H -0.27 -5.44 6.54 56.52 0.37 -5.07 16 18 C -0.13 -2.46 6.90 -83.70 -0.58 -3.04 16 19 C 0.59 11.19 7.73 -15.08 -0.12 11.08 16 20 O -0.49 -10.77 16.82 5.11 0.09 -10.68 16 21 N -0.65 -10.04 5.20 -18.60 -0.10 -10.14 16 22 H 0.44 5.55 8.86 -40.82 -0.36 5.19 16 23 C 0.71 11.03 8.37 -87.36 -0.73 10.30 16 24 O -0.55 -9.04 16.64 5.28 0.09 -8.95 16 25 H 0.07 0.72 8.14 -51.93 -0.42 0.29 16 26 H 0.09 0.89 7.38 -51.93 -0.38 0.51 16 27 H 0.09 0.89 8.01 -51.93 -0.42 0.48 16 28 H 0.12 1.24 8.14 -51.93 -0.42 0.82 16 29 H 0.12 1.43 7.01 -51.93 -0.36 1.06 16 30 H 0.05 1.02 6.05 -51.93 -0.31 0.71 16 31 H 0.06 1.38 6.69 -51.93 -0.35 1.03 16 32 H 0.27 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 298.76 15.07 4.50 4.50 Total: -1.00 -32.01 298.76 -7.58 -39.59 By element: Atomic # 1 Polarization: 5.06 SS G_CDS: -2.62 Total: 2.44 kcal Atomic # 6 Polarization: 23.39 SS G_CDS: -3.32 Total: 20.07 kcal Atomic # 7 Polarization: -57.96 SS G_CDS: -0.13 Total: -58.10 kcal Atomic # 8 Polarization: -19.81 SS G_CDS: 0.17 Total: -19.63 kcal Atomic # 14 Polarization: 19.55 SS G_CDS: -4.67 Total: 14.88 kcal Atomic # 17 Polarization: -2.24 SS G_CDS: -1.51 Total: -3.75 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -32.01 -7.58 -39.59 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000036047738.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.473 kcal (2) G-P(sol) polarization free energy of solvation -32.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.587 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds