Wall clock time and date at job start Tue Mar 31 2020 03:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34225 * 116.99745 * 2 1 4 4 O 1.20828 * 120.00008 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99808 * 179.97438 * 3 2 1 6 6 N 1.46498 * 109.47312 * 180.02562 * 5 3 2 7 7 C 1.36880 * 120.00016 * 74.91953 * 6 5 3 8 8 H 1.07997 * 119.99864 * 36.25575 * 7 6 5 9 9 C 1.39038 * 119.99973 * 216.52871 * 7 6 5 10 10 N 1.31371 * 120.00176 * 23.35685 * 9 7 6 11 11 Si 1.86803 * 119.99916 * 203.35126 * 9 7 6 12 12 H 1.48504 * 109.46962 * 90.00350 * 11 9 7 13 13 H 1.48506 * 109.47115 * 210.00312 * 11 9 7 14 14 H 1.48495 * 109.47140 * 330.00179 * 11 9 7 15 15 C 1.34777 * 120.00148 * 254.92375 * 6 5 3 16 16 O 1.21598 * 120.00400 * 182.16619 * 15 6 5 17 17 C 1.47677 * 119.99957 * 2.15976 * 15 6 5 18 18 C 1.40150 * 120.55024 * 218.84759 * 17 15 6 19 19 C 1.38236 * 118.30163 * 179.97438 * 18 17 15 20 20 C 1.38565 * 119.29620 * 0.02562 * 19 18 17 21 21 Cl 1.73605 * 119.46682 * 180.02562 * 20 19 18 22 22 N 1.32048 * 121.06782 * 359.97438 * 20 19 18 23 23 C 1.31684 * 121.86151 * 359.72770 * 22 20 19 24 24 H 1.09005 * 109.47312 * 60.00315 * 1 2 3 25 25 H 1.08999 * 109.46844 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47070 * 300.00064 * 1 2 3 27 27 H 1.09005 * 109.47275 * 60.00447 * 5 3 2 28 28 H 1.08999 * 109.47709 * 300.00449 * 5 3 2 29 29 H 0.97000 * 120.00017 * 184.90364 * 10 9 7 30 30 H 1.08003 * 120.85155 * 359.95230 * 18 17 15 31 31 H 1.07995 * 120.35037 * 179.97438 * 19 18 17 32 32 H 1.08001 * 119.71358 * 180.27108 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 3.9817 2.6797 0.0011 7 6 3.8796 3.4232 1.1458 8 1 4.0720 2.9664 2.1053 9 6 3.5226 4.7650 1.0737 10 7 2.8541 5.2121 0.0349 11 14 3.9935 5.9322 2.4541 12 1 5.3236 6.5271 2.1672 13 1 2.9797 7.0126 2.5564 14 1 4.0515 5.1850 3.7360 15 6 4.4643 3.2402 -1.1256 16 8 4.8459 4.3947 -1.1153 17 6 4.5299 2.4521 -2.3728 18 6 5.6231 2.5809 -3.2402 19 6 5.6370 1.8205 -4.3946 20 6 4.5795 0.9638 -4.6549 21 17 4.5928 0.0062 -6.1029 22 7 3.5624 0.8631 -3.8189 23 6 3.5069 1.5622 -2.7043 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 3.9564 0.7806 -0.8892 28 1 3.9558 0.7809 0.8907 29 1 2.6669 6.1600 -0.0501 30 1 6.4338 3.2573 -3.0129 31 1 6.4629 1.8940 -5.0865 32 1 2.6602 1.4495 -2.0433 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000120740366.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:15:41 Heat of formation + Delta-G solvation = -51.759859 kcal Electronic energy + Delta-G solvation = -22265.010667 eV Core-core repulsion = 18639.626670 eV Total energy + Delta-G solvation = -3625.383997 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 298.055 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.52066 -39.61462 -38.06882 -36.50618 -35.86028 -34.30025 -32.50181 -32.21610 -30.63696 -28.57682 -26.42514 -25.36380 -23.53245 -23.24643 -20.89963 -19.77471 -17.57466 -17.32876 -17.10523 -16.58617 -16.26242 -15.83827 -15.51042 -14.77468 -14.45939 -14.24218 -13.90588 -13.34144 -13.23947 -13.12869 -12.74074 -12.54422 -12.00210 -11.89343 -11.67800 -11.40823 -11.27798 -11.23090 -10.91982 -10.70079 -10.30047 -10.28049 -9.83409 -9.75813 -9.61502 -9.02232 -8.78124 -8.37932 -7.42072 -6.23130 -3.96493 0.88974 1.31080 1.87817 2.84344 3.06439 3.28686 3.35140 3.37161 3.62795 4.13214 4.31771 4.54990 4.64299 5.01238 5.09230 5.15485 5.25884 5.39637 5.42360 5.45084 5.49981 5.54656 5.69917 5.81841 5.87936 6.05180 6.32159 6.58813 6.89609 7.42883 7.80616 7.97268 8.43265 8.74192 8.88282 9.38143 9.93767 10.82067 Molecular weight = 298.06amu Principal moments of inertia in cm(-1) A = 0.015624 B = 0.005970 C = 0.004573 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1791.680922 B = 4688.610393 C = 6121.149524 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.373 6.373 3 C 0.419 3.581 4 O -0.450 6.450 5 C 0.098 3.902 6 N -0.417 5.417 7 C -0.344 4.344 8 H 0.089 0.911 9 C 0.075 3.925 10 N -0.790 5.790 11 Si 0.912 3.088 12 H -0.276 1.276 13 H -0.287 1.287 14 H -0.272 1.272 15 C 0.502 3.498 16 O -0.513 6.513 17 C -0.136 4.136 18 C -0.030 4.030 19 C -0.155 4.155 20 C 0.166 3.834 21 Cl -0.044 7.044 22 N -0.477 5.477 23 C 0.125 3.875 24 H 0.058 0.942 25 H 0.093 0.907 26 H 0.058 0.942 27 H 0.103 0.897 28 H 0.105 0.895 29 H 0.267 0.733 30 H 0.152 0.848 31 H 0.146 0.854 32 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.171 -10.538 -5.239 11.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.291 6.291 3 C 0.257 3.743 4 O -0.332 6.332 5 C -0.028 4.028 6 N -0.137 5.137 7 C -0.470 4.470 8 H 0.107 0.893 9 C -0.140 4.140 10 N -0.421 5.421 11 Si 0.738 3.262 12 H -0.201 1.201 13 H -0.212 1.212 14 H -0.197 1.197 15 C 0.291 3.709 16 O -0.390 6.390 17 C -0.142 4.142 18 C -0.056 4.056 19 C -0.176 4.176 20 C 0.001 3.999 21 Cl -0.016 7.016 22 N -0.188 5.188 23 C -0.033 4.033 24 H 0.076 0.924 25 H 0.111 0.889 26 H 0.077 0.923 27 H 0.120 0.880 28 H 0.123 0.877 29 H 0.077 0.923 30 H 0.169 0.831 31 H 0.163 0.837 32 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.288 -10.093 -5.611 11.620 hybrid contribution 0.265 1.026 0.568 1.202 sum 1.553 -9.067 -5.043 10.491 Atomic orbital electron populations 1.23111 0.77678 1.02696 1.02259 1.86543 1.22545 1.34813 1.85239 1.24961 0.93236 0.81573 0.74496 1.90825 1.65954 1.35463 1.40913 1.21618 0.86799 0.89523 1.04868 1.43102 1.52754 1.07134 1.10742 1.19103 1.49540 0.93337 0.85005 0.89318 1.25140 0.92990 0.98574 0.97291 1.69979 1.27898 1.14895 1.29334 0.86215 0.78597 0.80275 0.81117 1.20147 1.21249 1.19712 1.17307 0.84145 0.87248 0.82239 1.90652 1.49288 1.15969 1.83082 1.21703 0.95849 0.97901 0.98788 1.21634 0.97296 0.95531 0.91182 1.21719 0.99254 0.97558 0.99045 1.21647 0.92747 0.94791 0.90693 1.98376 1.98140 1.71186 1.33849 1.66917 1.24451 1.24082 1.03361 1.23061 0.97577 0.90837 0.91780 0.92352 0.88861 0.92313 0.87958 0.87717 0.92293 0.83080 0.83660 0.82322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.50 10.56 101.05 1.07 1.57 16 2 O -0.37 -6.21 10.57 -39.24 -0.41 -6.62 16 3 C 0.42 8.33 5.76 36.00 0.21 8.53 16 4 O -0.45 -10.89 15.69 -18.75 -0.29 -11.18 16 5 C 0.10 1.85 5.46 -5.20 -0.03 1.82 16 6 N -0.42 -9.92 2.25 -117.23 -0.26 -10.18 16 7 C -0.34 -8.99 8.67 -15.00 -0.13 -9.12 16 8 H 0.09 2.19 7.94 -52.49 -0.42 1.77 16 9 C 0.07 2.04 4.22 -17.45 -0.07 1.97 16 10 N -0.79 -23.08 11.46 55.50 0.64 -22.45 16 11 Si 0.91 21.23 29.62 -169.99 -5.03 16.19 16 12 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 13 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 14 H -0.27 -6.03 7.11 56.52 0.40 -5.63 16 15 C 0.50 12.26 6.64 -12.41 -0.08 12.18 16 16 O -0.51 -14.40 14.25 5.28 0.08 -14.33 16 17 C -0.14 -2.71 5.18 -104.82 -0.54 -3.26 16 18 C -0.03 -0.49 9.79 -38.87 -0.38 -0.87 16 19 C -0.15 -2.17 9.86 -39.46 -0.39 -2.56 16 20 C 0.17 2.57 7.27 -17.34 -0.13 2.44 16 21 Cl -0.04 -0.57 29.10 -51.86 -1.51 -2.08 16 22 N -0.48 -8.46 10.32 -9.99 -0.10 -8.57 16 23 C 0.13 2.38 8.56 -17.11 -0.15 2.23 16 24 H 0.06 0.81 8.13 -51.93 -0.42 0.39 16 25 H 0.09 0.92 8.14 -51.93 -0.42 0.50 16 26 H 0.06 0.81 8.13 -51.93 -0.42 0.39 16 27 H 0.10 1.72 4.82 -51.93 -0.25 1.47 16 28 H 0.11 1.69 8.14 -51.93 -0.42 1.27 16 29 H 0.27 7.52 8.31 -40.82 -0.34 7.18 16 30 H 0.15 2.30 8.06 -52.48 -0.42 1.87 16 31 H 0.15 1.53 8.06 -52.49 -0.42 1.10 16 32 H 0.16 3.15 4.46 -52.49 -0.23 2.92 16 LS Contribution 300.74 15.07 4.53 4.53 Total: -1.00 -33.30 300.74 -5.57 -38.88 By element: Atomic # 1 Polarization: 3.44 SS G_CDS: -2.57 Total: 0.86 kcal Atomic # 6 Polarization: 15.57 SS G_CDS: -0.63 Total: 14.94 kcal Atomic # 7 Polarization: -41.47 SS G_CDS: 0.27 Total: -41.20 kcal Atomic # 8 Polarization: -31.49 SS G_CDS: -0.63 Total: -32.13 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.03 Total: 16.19 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.51 Total: -2.08 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -33.30 -5.57 -38.88 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000120740366.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.883 kcal (2) G-P(sol) polarization free energy of solvation -33.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.877 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds