Wall clock time and date at job start Tue Mar 31 2020 03:56:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37783 * 119.90560 * 2 1 4 4 C 1.39689 * 119.90466 * 179.74626 * 3 2 1 5 5 C 1.47574 * 120.14067 * 180.24955 * 4 3 2 6 6 O 1.21587 * 119.99793 * 180.25040 * 5 4 3 7 7 N 1.34769 * 119.99890 * 0.25855 * 5 4 3 8 8 C 1.46507 * 119.99793 * 179.97438 * 7 5 4 9 9 C 1.50699 * 109.47065 * 179.97438 * 8 7 5 10 10 O 1.21300 * 119.99963 * 0.02562 * 9 8 7 11 11 N 1.34777 * 120.00204 * 180.02562 * 9 8 7 12 12 C 1.37098 * 120.00217 * 180.02562 * 11 9 8 13 13 H 1.07999 * 119.99572 * 359.97438 * 12 11 9 14 14 C 1.38953 * 119.99739 * 180.02562 * 12 11 9 15 15 N 1.31412 * 119.99510 * 180.02562 * 14 12 11 16 16 Si 1.86791 * 120.00004 * 359.97438 * 14 12 11 17 17 H 1.48502 * 109.46952 * 90.00752 * 16 14 12 18 18 H 1.48507 * 109.47083 * 210.00154 * 16 14 12 19 19 H 1.48503 * 109.47743 * 330.00604 * 16 14 12 20 20 C 1.39946 * 119.71610 * 0.50429 * 4 3 2 21 21 F 1.35104 * 120.09358 * 179.76895 * 20 4 3 22 22 C 1.38153 * 119.80723 * 359.49598 * 20 4 3 23 23 C 1.38535 * 120.09302 * 0.27350 * 22 20 4 24 24 F 1.35102 * 119.85416 * 179.97438 * 23 22 20 25 25 H 1.09004 * 109.47002 * 269.97615 * 1 2 3 26 26 H 1.09004 * 109.47128 * 29.97686 * 1 2 3 27 27 H 1.09001 * 109.47290 * 149.97934 * 1 2 3 28 28 H 1.07994 * 120.04508 * 0.02562 * 3 2 1 29 29 H 0.96996 * 120.00469 * 359.97438 * 7 5 4 30 30 H 1.08998 * 109.47110 * 299.99659 * 8 7 5 31 31 H 1.09006 * 109.46741 * 59.99930 * 8 7 5 32 32 H 0.97000 * 119.99524 * 0.02562 * 11 9 8 33 33 H 0.96999 * 119.99519 * 179.97438 * 15 14 12 34 34 H 1.07995 * 119.95012 * 180.24877 * 22 20 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1939 1.1944 0.0000 4 6 3.5908 1.1944 0.0054 5 6 4.3318 2.4705 0.0109 6 8 5.5477 2.4675 0.0110 7 7 3.6608 3.6393 0.0161 8 6 4.3965 4.9063 0.0223 9 6 3.4200 6.0541 0.0266 10 8 2.2269 5.8354 0.0253 11 7 3.8723 7.3237 0.0320 12 6 2.9840 8.3679 0.0365 13 1 1.9217 8.1731 0.0353 14 6 3.4505 9.6768 0.0416 15 7 2.5989 10.6777 0.0464 16 14 5.2878 10.0135 0.0429 17 1 5.7746 10.1083 -1.3568 18 1 5.5561 11.2927 0.7479 19 1 5.9934 8.9074 0.7386 20 6 4.2845 -0.0210 0.0000 21 9 5.6355 -0.0299 0.0004 22 6 3.5838 -1.2117 0.0000 23 6 2.1985 -1.2025 -0.0004 24 9 1.5182 -2.3697 -0.0009 25 1 -0.3633 -0.0004 1.0277 26 1 -0.3633 0.8902 -0.5135 27 1 -0.3634 -0.8898 -0.5141 28 1 1.6531 2.1292 0.0004 29 1 2.6908 3.6417 0.0158 30 1 5.0229 4.9583 0.9127 31 1 5.0236 4.9665 -0.8673 32 1 4.8264 7.4985 0.0327 33 1 2.9246 11.5914 0.0503 34 1 4.1168 -2.1510 0.0000 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000343513111.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:56:44 Heat of formation + Delta-G solvation = -135.118603 kcal Electronic energy + Delta-G solvation = -22887.433031 eV Core-core repulsion = 18842.470742 eV Total energy + Delta-G solvation = -4044.962289 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 298.092 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.45019 -49.13481 -40.24736 -38.85850 -38.11809 -34.67549 -33.88846 -32.97558 -31.90067 -31.53563 -27.93276 -27.08358 -24.79099 -23.95949 -22.44297 -20.47271 -19.72649 -18.87775 -18.46696 -17.79778 -17.50350 -16.44305 -16.01671 -15.71018 -15.65304 -15.28417 -15.27573 -15.16934 -14.74835 -14.71324 -14.03881 -13.87927 -13.67292 -13.51423 -13.16297 -12.63023 -12.55615 -12.41102 -12.25865 -12.23327 -11.81204 -11.79656 -11.27568 -10.68184 -10.11906 -10.04262 -9.75140 -9.50766 -9.09500 -8.87342 -8.85025 -8.35956 -6.45688 -3.98550 0.19809 0.59875 2.44838 2.96018 2.99984 3.02121 3.10279 3.31343 3.43757 3.49940 3.96958 3.99442 4.09546 4.25020 4.39376 4.47001 4.71944 5.06424 5.09143 5.24641 5.27230 5.33994 5.40023 5.53485 5.62137 5.70164 5.73067 5.74174 5.77462 6.29163 6.38865 7.38030 7.53682 7.94060 8.16411 8.39322 8.76143 9.24224 9.56601 10.66303 Molecular weight = 298.09amu Principal moments of inertia in cm(-1) A = 0.027024 B = 0.003094 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1035.866125 B = 9047.221157 C =10062.634172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.135 4.135 3 C -0.028 4.028 4 C -0.173 4.173 5 C 0.557 3.443 6 O -0.531 6.531 7 N -0.700 5.700 8 C 0.106 3.894 9 C 0.437 3.563 10 O -0.580 6.580 11 N -0.574 5.574 12 C -0.311 4.311 13 H 0.122 0.878 14 C 0.046 3.954 15 N -0.873 5.873 16 Si 0.879 3.121 17 H -0.268 1.268 18 H -0.274 1.274 19 H -0.267 1.267 20 C 0.184 3.816 21 F -0.106 7.106 22 C -0.200 4.200 23 C 0.151 3.849 24 F -0.125 7.125 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.072 0.928 28 H 0.153 0.847 29 H 0.411 0.589 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.375 0.625 33 H 0.276 0.724 34 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.565 -21.633 -0.098 21.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.136 4.136 3 C -0.047 4.047 4 C -0.177 4.177 5 C 0.343 3.657 6 O -0.409 6.409 7 N -0.354 5.354 8 C -0.021 4.021 9 C 0.223 3.777 10 O -0.465 6.465 11 N -0.211 5.211 12 C -0.440 4.440 13 H 0.140 0.860 14 C -0.158 4.158 15 N -0.511 5.511 16 Si 0.705 3.295 17 H -0.193 1.193 18 H -0.199 1.199 19 H -0.192 1.192 20 C 0.163 3.837 21 F -0.084 7.084 22 C -0.220 4.220 23 C 0.131 3.869 24 F -0.104 7.104 25 H 0.098 0.902 26 H 0.099 0.901 27 H 0.091 0.909 28 H 0.170 0.830 29 H 0.251 0.749 30 H 0.106 0.894 31 H 0.106 0.894 32 H 0.208 0.792 33 H 0.087 0.913 34 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 0.612 -21.514 -0.098 21.523 hybrid contribution 1.149 0.281 0.021 1.183 sum 1.761 -21.233 -0.077 21.306 Atomic orbital electron populations 1.20777 0.88908 1.04048 1.03472 1.19924 0.97966 0.91160 1.04595 1.21133 0.91729 0.98506 0.93301 1.20113 0.94264 0.93116 1.10222 1.17783 0.87150 0.83201 0.77585 1.90843 1.12841 1.87418 1.49757 1.45550 1.11623 1.04418 1.73857 1.21029 0.94476 0.82910 1.03708 1.19579 0.89185 0.83680 0.85293 1.90532 1.16215 1.83822 1.55944 1.42117 1.08409 1.05465 1.65107 1.19443 0.92405 0.83321 1.48817 0.86024 1.25072 0.98533 0.95217 0.97020 1.69617 1.34327 0.99311 1.47869 0.86672 0.84544 0.79102 0.79188 1.19345 1.19935 1.19191 1.17210 0.77734 0.92024 0.96712 1.91633 1.27189 1.97097 1.92475 1.20964 0.93041 0.98943 1.09030 1.17312 0.88874 0.81277 0.99426 1.91532 1.79706 1.45886 1.93243 0.90228 0.90085 0.90862 0.82950 0.74949 0.89362 0.89358 0.79182 0.91315 0.82717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.78 9.83 36.00 0.35 -0.43 16 2 C -0.14 -1.20 5.88 -104.61 -0.62 -1.81 16 3 C -0.03 -0.28 9.18 -39.21 -0.36 -0.64 16 4 C -0.17 -2.14 5.88 -104.91 -0.62 -2.76 16 5 C 0.56 8.52 7.76 -12.46 -0.10 8.43 16 6 O -0.53 -9.71 15.34 5.29 0.08 -9.63 16 7 N -0.70 -10.69 5.48 -62.51 -0.34 -11.04 16 8 C 0.11 1.77 6.15 -5.19 -0.03 1.73 16 9 C 0.44 9.22 7.85 -10.99 -0.09 9.13 16 10 O -0.58 -13.97 15.24 5.54 0.08 -13.89 16 11 N -0.57 -12.94 5.09 -10.96 -0.06 -12.99 16 12 C -0.31 -8.38 10.16 -14.93 -0.15 -8.53 16 13 H 0.12 3.72 7.39 -52.49 -0.39 3.34 16 14 C 0.05 1.21 5.50 -17.47 -0.10 1.12 16 15 N -0.87 -24.49 13.96 55.50 0.77 -23.71 16 16 Si 0.88 18.63 27.74 -169.99 -4.71 13.92 16 17 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 18 H -0.27 -5.85 7.11 56.52 0.40 -5.44 16 19 H -0.27 -5.16 6.52 56.52 0.37 -4.79 16 20 C 0.18 2.20 7.28 -38.97 -0.28 1.91 16 21 F -0.11 -1.48 15.55 2.25 0.04 -1.44 16 22 C -0.20 -1.88 9.99 -39.50 -0.39 -2.27 16 23 C 0.15 1.38 7.24 -39.30 -0.28 1.10 16 24 F -0.13 -1.13 16.46 2.25 0.04 -1.09 16 25 H 0.08 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.08 0.49 8.08 -51.93 -0.42 0.07 16 27 H 0.07 0.46 7.63 -51.93 -0.40 0.06 16 28 H 0.15 1.33 6.40 -52.49 -0.34 1.00 16 29 H 0.41 5.95 5.46 -40.82 -0.22 5.73 16 30 H 0.09 1.37 8.14 -51.93 -0.42 0.95 16 31 H 0.09 1.36 8.14 -51.93 -0.42 0.94 16 32 H 0.37 7.46 5.76 -40.82 -0.24 7.22 16 33 H 0.28 7.15 8.31 -40.82 -0.34 6.81 16 34 H 0.16 1.12 8.06 -52.49 -0.42 0.70 16 LS Contribution 309.80 15.07 4.67 4.67 Total: -1.00 -31.84 309.80 -4.95 -36.79 By element: Atomic # 1 Polarization: 14.30 SS G_CDS: -2.86 Total: 11.44 kcal Atomic # 6 Polarization: 9.64 SS G_CDS: -2.66 Total: 6.98 kcal Atomic # 7 Polarization: -48.12 SS G_CDS: 0.38 Total: -47.75 kcal Atomic # 8 Polarization: -23.68 SS G_CDS: 0.17 Total: -23.52 kcal Atomic # 9 Polarization: -2.61 SS G_CDS: 0.07 Total: -2.53 kcal Atomic # 14 Polarization: 18.63 SS G_CDS: -4.71 Total: 13.92 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -31.84 -4.95 -36.79 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000343513111.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.329 kcal (2) G-P(sol) polarization free energy of solvation -31.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.790 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds