Wall clock time and date at job start Tue Mar 31 2020 03:15:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34221 * 116.99994 * 2 1 4 4 O 1.20827 * 120.00095 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99740 * 179.97438 * 3 2 1 6 6 N 1.46508 * 109.46679 * 179.97438 * 5 3 2 7 7 C 1.36789 * 119.99603 * 264.55570 * 6 5 3 8 8 H 1.07991 * 119.99334 * 132.00764 * 7 6 5 9 9 C 1.39101 * 120.00033 * 312.00336 * 7 6 5 10 10 N 1.31323 * 120.00572 * 3.26585 * 9 7 6 11 11 Si 1.86800 * 119.99872 * 183.25646 * 9 7 6 12 12 H 1.48506 * 109.46991 * 60.00215 * 11 9 7 13 13 H 1.48500 * 109.47606 * 180.02562 * 11 9 7 14 14 H 1.48507 * 109.47413 * 300.00657 * 11 9 7 15 15 C 1.34772 * 120.00180 * 84.56596 * 6 5 3 16 16 O 1.21568 * 119.99850 * 4.82972 * 15 6 5 17 17 C 1.48011 * 120.00256 * 184.83860 * 15 6 5 18 18 C 1.39356 * 119.73006 * 174.18273 * 17 15 6 19 19 C 1.38698 * 119.03749 * 179.70320 * 18 17 15 20 20 Cl 1.73602 * 120.76352 * 180.25390 * 19 18 17 21 21 C 1.38807 * 118.46862 * 0.26935 * 19 18 17 22 22 C 1.38486 * 119.35151 * 0.02562 * 21 19 18 23 23 N 1.31551 * 120.93351 * 0.02562 * 22 21 19 24 24 H 1.09003 * 109.47428 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47358 * 300.00532 * 1 2 3 26 26 H 1.09005 * 109.46745 * 60.00784 * 1 2 3 27 27 H 1.08995 * 109.47274 * 60.00251 * 5 3 2 28 28 H 1.08997 * 109.46961 * 299.99383 * 5 3 2 29 29 H 0.96993 * 120.00467 * 179.97438 * 10 9 7 30 30 H 1.07998 * 120.47747 * 359.96582 * 18 17 15 31 31 H 1.07999 * 120.32092 * 179.97438 * 21 19 18 32 32 H 1.08000 * 119.53236 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 7 3.9817 2.6797 -0.0002 7 6 4.2838 3.3029 -1.1798 8 1 3.8647 4.2734 -1.4004 9 6 5.1309 2.6865 -2.0949 10 7 5.5894 1.4794 -1.8557 11 14 5.6161 3.5759 -3.6643 12 1 6.3172 4.8392 -3.3209 13 1 6.5188 2.7102 -4.4651 14 1 4.3977 3.8852 -4.4550 15 6 4.0662 3.3580 1.1613 16 8 3.8836 2.7821 2.2162 17 6 4.3813 4.8042 1.1526 18 6 4.3480 5.5260 2.3442 19 6 4.6518 6.8791 2.3204 20 17 4.6305 7.8197 3.7793 21 6 4.9729 7.4638 1.1031 22 6 4.9801 6.6860 -0.0427 23 7 4.6869 5.4046 0.0080 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5137 -0.8901 27 1 3.9564 0.7805 -0.8891 28 1 3.9556 0.7809 0.8909 29 1 6.1798 1.0495 -2.4940 30 1 4.0935 5.0378 3.2733 31 1 5.2140 8.5152 1.0501 32 1 5.2291 7.1381 -0.9914 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000348783081.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:15:37 Heat of formation + Delta-G solvation = -63.682399 kcal Electronic energy + Delta-G solvation = -21909.756691 eV Core-core repulsion = 18283.855694 eV Total energy + Delta-G solvation = -3625.900997 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 298.055 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -40.15320 -39.61045 -38.03125 -36.54854 -35.77210 -34.87847 -31.96054 -31.53522 -31.06272 -28.65633 -26.52241 -25.11707 -23.49836 -23.11575 -20.80467 -19.57603 -18.23472 -16.97316 -16.67935 -16.30694 -15.82624 -15.65046 -15.35328 -14.83033 -14.47967 -14.21420 -14.13443 -13.46738 -13.32616 -13.02814 -12.78486 -12.59739 -12.03586 -11.84993 -11.68904 -11.41621 -11.23071 -11.16687 -10.90097 -10.74194 -10.43860 -10.24479 -9.76375 -9.33730 -9.23032 -9.17151 -8.84937 -8.49566 -7.57309 -6.43162 -4.17040 1.06033 1.40754 2.05873 3.05616 3.15771 3.17670 3.21432 3.23839 3.63117 4.07958 4.35230 4.50430 4.80299 5.01045 5.08505 5.25073 5.34567 5.45171 5.51544 5.62930 5.81644 5.91306 5.92605 6.09187 6.18285 6.36170 6.81558 6.85501 7.01701 7.56134 7.69624 8.28422 8.42738 8.57651 8.98460 9.21000 9.66074 10.60322 Molecular weight = 298.06amu Principal moments of inertia in cm(-1) A = 0.012949 B = 0.006171 C = 0.004544 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2161.827832 B = 4536.608886 C = 6160.129882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.367 6.367 3 C 0.447 3.553 4 O -0.509 6.509 5 C 0.115 3.885 6 N -0.398 5.398 7 C -0.295 4.295 8 H 0.118 0.882 9 C 0.039 3.961 10 N -0.881 5.881 11 Si 0.930 3.070 12 H -0.268 1.268 13 H -0.286 1.286 14 H -0.273 1.273 15 C 0.525 3.475 16 O -0.591 6.591 17 C 0.133 3.867 18 C -0.121 4.121 19 C -0.005 4.005 20 Cl -0.067 7.067 21 C -0.167 4.167 22 C 0.097 3.903 23 N -0.402 5.402 24 H 0.093 0.907 25 H 0.056 0.944 26 H 0.056 0.944 27 H 0.160 0.840 28 H 0.100 0.900 29 H 0.274 0.726 30 H 0.150 0.850 31 H 0.139 0.861 32 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.043 5.597 2.131 6.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.284 6.284 3 C 0.289 3.711 4 O -0.396 6.396 5 C -0.010 4.010 6 N -0.114 5.114 7 C -0.424 4.424 8 H 0.135 0.865 9 C -0.165 4.165 10 N -0.520 5.520 11 Si 0.757 3.243 12 H -0.193 1.193 13 H -0.211 1.211 14 H -0.199 1.199 15 C 0.314 3.686 16 O -0.476 6.476 17 C -0.006 4.006 18 C -0.143 4.143 19 C -0.040 4.040 20 Cl -0.038 7.038 21 C -0.188 4.188 22 C -0.062 4.062 23 N -0.113 5.113 24 H 0.111 0.889 25 H 0.074 0.926 26 H 0.075 0.925 27 H 0.177 0.823 28 H 0.118 0.882 29 H 0.085 0.915 30 H 0.168 0.832 31 H 0.157 0.843 32 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.250 4.996 1.903 5.800 hybrid contribution 0.035 1.110 0.060 1.112 sum -2.214 6.106 1.963 6.785 Atomic orbital electron populations 1.23094 0.78118 1.02628 1.01967 1.86549 1.22180 1.34739 1.84895 1.25323 0.93587 0.80850 0.71355 1.90579 1.67137 1.36450 1.45408 1.21373 0.83952 0.87633 1.08063 1.42954 1.54088 1.08402 1.05926 1.20067 1.25133 1.03716 0.93519 0.86523 1.25626 0.95013 0.95736 1.00140 1.69511 1.32269 1.12979 1.37202 0.85936 0.78633 0.79448 0.80311 1.19289 1.21116 1.19859 1.17936 0.81305 0.85216 0.84123 1.90651 1.56779 1.68979 1.31225 1.21296 0.96022 0.95402 0.87893 1.22012 0.99533 0.91934 1.00846 1.21086 1.02502 0.92260 0.88125 1.98360 1.96988 1.72385 1.36038 1.22194 1.02739 1.01882 0.91979 1.23185 0.95198 0.90154 0.97699 1.68863 1.06643 1.09073 1.26744 0.88882 0.92554 0.92481 0.82318 0.88165 0.91526 0.83210 0.84314 0.82027 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.54 10.56 101.05 1.07 1.61 16 2 O -0.37 -7.11 10.56 -39.24 -0.41 -7.52 16 3 C 0.45 10.18 7.99 36.01 0.29 10.47 16 4 O -0.51 -12.78 16.06 -18.75 -0.30 -13.09 16 5 C 0.11 2.71 5.48 -5.19 -0.03 2.69 16 6 N -0.40 -10.11 2.04 -117.12 -0.24 -10.35 16 7 C -0.30 -7.45 7.48 -15.02 -0.11 -7.56 16 8 H 0.12 2.94 5.95 -52.49 -0.31 2.63 16 9 C 0.04 0.95 5.35 -17.45 -0.09 0.86 16 10 N -0.88 -22.14 10.98 55.50 0.61 -21.53 16 11 Si 0.93 19.37 29.55 -169.99 -5.02 14.34 16 12 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 13 H -0.29 -5.92 7.11 56.52 0.40 -5.51 16 14 H -0.27 -5.65 7.11 56.52 0.40 -5.25 16 15 C 0.53 13.22 7.42 -12.26 -0.09 13.13 16 16 O -0.59 -15.56 15.98 5.31 0.08 -15.48 16 17 C 0.13 2.91 6.66 -83.02 -0.55 2.36 16 18 C -0.12 -2.28 9.45 -39.00 -0.37 -2.64 16 19 C -0.01 -0.08 6.37 -39.20 -0.25 -0.33 16 20 Cl -0.07 -0.88 29.02 -51.86 -1.50 -2.39 16 21 C -0.17 -2.34 9.94 -39.28 -0.39 -2.73 16 22 C 0.10 1.55 11.18 -17.58 -0.20 1.35 16 23 N -0.40 -8.31 6.36 -9.83 -0.06 -8.38 16 24 H 0.09 1.03 8.14 -51.93 -0.42 0.60 16 25 H 0.06 0.83 8.13 -51.93 -0.42 0.41 16 26 H 0.06 0.84 8.13 -51.93 -0.42 0.42 16 27 H 0.16 3.85 5.51 -51.93 -0.29 3.56 16 28 H 0.10 2.32 7.53 -51.93 -0.39 1.93 16 29 H 0.27 6.53 8.31 -40.82 -0.34 6.19 16 30 H 0.15 2.77 7.65 -52.49 -0.40 2.37 16 31 H 0.14 1.48 8.06 -52.49 -0.42 1.05 16 32 H 0.16 2.06 8.06 -52.49 -0.42 1.64 16 LS Contribution 305.22 15.07 4.60 4.60 Total: -1.00 -29.98 305.22 -5.62 -35.60 By element: Atomic # 1 Polarization: 7.64 SS G_CDS: -2.64 Total: 5.00 kcal Atomic # 6 Polarization: 19.91 SS G_CDS: -0.73 Total: 19.18 kcal Atomic # 7 Polarization: -40.56 SS G_CDS: 0.31 Total: -40.25 kcal Atomic # 8 Polarization: -35.45 SS G_CDS: -0.63 Total: -36.08 kcal Atomic # 14 Polarization: 19.37 SS G_CDS: -5.02 Total: 14.34 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.39 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -29.98 -5.62 -35.60 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000348783081.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.081 kcal (2) G-P(sol) polarization free energy of solvation -29.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.063 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds