Wall clock time and date at job start Tue Mar 31 2020 03:13:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 C 1.35632 * 124.93476 * 2 1 4 4 C 1.35464 * 107.13125 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 127.23916 * 179.97438 * 4 3 2 6 6 C 1.41548 * 105.52252 * 0.02562 * 4 3 2 7 7 C 1.47660 * 126.46276 * 179.97438 * 6 4 3 8 8 O 1.21576 * 120.00119 * 359.97438 * 7 6 4 9 9 N 1.34783 * 120.00183 * 179.97438 * 7 6 4 10 10 C 1.46502 * 120.00028 * 179.97438 * 9 7 6 11 11 H 1.09005 * 112.84617 * 332.86998 * 10 9 7 12 12 C 1.53776 * 113.61202 * 104.17520 * 10 9 7 13 13 C 1.53785 * 87.08063 * 89.11589 * 12 10 9 14 14 H 1.08996 * 113.61556 * 139.97577 * 13 12 10 15 15 N 1.46496 * 113.69274 * 270.87326 * 13 12 10 16 16 C 1.36938 * 120.00300 * 183.55886 * 15 13 12 17 17 H 1.08000 * 119.99709 * 0.02562 * 16 15 13 18 18 C 1.38812 * 120.00174 * 179.97438 * 16 15 13 19 19 N 1.31621 * 119.99801 * 0.02562 * 18 16 15 20 20 Si 1.86801 * 119.99986 * 179.97438 * 18 16 15 21 21 H 1.48494 * 109.47128 * 60.00584 * 20 18 16 22 22 H 1.48503 * 109.46642 * 180.02562 * 20 18 16 23 23 H 1.48504 * 109.47065 * 299.99902 * 20 18 16 24 24 C 1.53778 * 113.61260 * 201.67315 * 10 9 7 25 25 N 1.28466 * 124.92715 * 179.70598 * 2 1 3 26 26 H 1.08999 * 109.47268 * 89.98905 * 1 2 3 27 27 H 1.09004 * 109.46468 * 329.99646 * 1 2 3 28 28 H 1.08995 * 109.47263 * 210.00144 * 1 2 3 29 29 H 1.07998 * 126.43983 * 0.04197 * 3 2 1 30 30 H 0.96993 * 119.99550 * 359.97438 * 9 7 6 31 31 H 1.08996 * 113.61538 * 203.66218 * 12 10 9 32 32 H 1.08998 * 113.61777 * 334.56936 * 12 10 9 33 33 H 0.97007 * 119.99802 * 3.55695 * 15 13 12 34 34 H 0.97004 * 120.00166 * 179.97438 * 19 18 16 35 35 H 1.09007 * 113.61573 * 25.43781 * 24 10 9 36 36 H 1.08998 * 113.61327 * 156.33292 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2418 1.1119 0.0000 4 6 3.5315 0.6977 -0.0006 5 17 4.9543 1.6924 -0.0015 6 6 3.4752 -0.7166 -0.0015 7 6 4.6269 -1.6407 -0.0030 8 8 5.7599 -1.2000 -0.0039 9 7 4.4220 -2.9729 -0.0032 10 6 5.5647 -3.8897 -0.0052 11 1 6.4536 -3.4571 -0.4644 12 6 5.8311 -4.5449 1.3603 13 6 4.8668 -5.6609 0.9247 14 1 5.1932 -6.6588 1.2173 15 7 3.4673 -5.3967 1.2677 16 6 2.5084 -6.3385 1.0052 17 1 2.7840 -7.2761 0.5456 18 6 1.1824 -6.0883 1.3307 19 7 0.8467 -4.9458 1.8912 20 14 -0.1257 -7.3727 0.9719 21 1 0.1940 -8.6233 1.7059 22 1 -1.4507 -6.8656 1.4107 23 1 -0.1604 -7.6498 -0.4867 24 6 5.2249 -5.2963 -0.5257 25 7 2.2006 -1.0533 0.0054 26 1 -0.3634 0.0002 -1.0276 27 1 -0.3632 0.8900 0.5139 28 1 -0.3633 -0.8899 0.5138 29 1 1.8968 2.1353 0.0006 30 1 3.5181 -3.3245 -0.0021 31 1 6.8594 -4.8823 1.4895 32 1 5.4676 -3.9587 2.2042 33 1 3.2198 -4.5547 1.6809 34 1 -0.0800 -4.7708 2.1184 35 1 4.3722 -5.3166 -1.2044 36 1 6.0876 -5.8390 -0.9121 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001022132659.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:13:43 Heat of formation + Delta-G solvation = 81.520925 kcal Electronic energy + Delta-G solvation = -22038.593952 eV Core-core repulsion = 18587.115290 eV Total energy + Delta-G solvation = -3451.478662 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 298.094 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.59072 -39.55266 -37.66505 -36.37519 -33.58132 -33.37436 -32.34586 -30.55384 -29.80462 -27.52978 -25.15045 -24.51091 -23.45129 -21.81735 -21.51315 -19.80854 -18.71268 -17.73410 -17.16200 -16.41192 -16.32959 -15.45031 -14.73999 -14.68481 -14.56136 -14.14572 -13.85729 -13.67549 -13.13396 -13.05638 -12.95790 -12.77555 -11.90060 -11.75227 -11.68187 -11.38760 -11.35810 -10.88901 -10.78037 -10.46639 -10.27298 -10.22502 -9.76685 -9.57826 -9.48763 -9.26613 -8.88841 -8.74452 -8.40483 -6.99857 -5.80147 -3.09904 1.71414 1.93351 1.98568 2.77203 3.40909 3.44990 3.46216 3.59209 3.70559 4.44476 4.54980 4.63582 4.96325 5.01418 5.20212 5.25947 5.30268 5.37374 5.45267 5.50493 5.59547 5.82219 5.96295 6.10646 6.20424 6.39313 6.44590 6.62457 6.68173 6.74608 6.92371 7.18955 7.69957 7.79850 8.17300 8.37754 8.68443 9.48672 10.05456 10.40517 11.41091 Molecular weight = 298.09amu Principal moments of inertia in cm(-1) A = 0.014266 B = 0.005401 C = 0.004059 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1962.275662 B = 5182.600904 C = 6895.811220 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.277 5.277 3 C -0.012 4.012 4 C -0.103 4.103 5 Cl -0.016 7.016 6 C -0.005 4.005 7 C 0.600 3.400 8 O -0.534 6.534 9 N -0.686 5.686 10 C 0.127 3.873 11 H 0.091 0.909 12 C -0.164 4.164 13 C 0.161 3.839 14 H 0.052 0.948 15 N -0.709 5.709 16 C -0.242 4.242 17 H 0.071 0.929 18 C -0.009 4.009 19 N -0.927 5.927 20 Si 0.907 3.093 21 H -0.286 1.286 22 H -0.292 1.292 23 H -0.286 1.286 24 C -0.179 4.179 25 N -0.219 5.219 26 H 0.087 0.913 27 H 0.096 0.904 28 H 0.107 0.893 29 H 0.189 0.811 30 H 0.421 0.579 31 H 0.087 0.913 32 H 0.068 0.932 33 H 0.385 0.615 34 H 0.254 0.746 35 H 0.074 0.926 36 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.521 12.395 -4.567 13.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.066 5.066 3 C -0.155 4.155 4 C -0.141 4.141 5 Cl 0.012 6.988 6 C -0.166 4.166 7 C 0.383 3.617 8 O -0.409 6.409 9 N -0.339 5.339 10 C 0.022 3.978 11 H 0.109 0.891 12 C -0.203 4.203 13 C 0.050 3.950 14 H 0.070 0.930 15 N -0.351 5.351 16 C -0.373 4.373 17 H 0.089 0.911 18 C -0.206 4.206 19 N -0.574 5.574 20 Si 0.738 3.262 21 H -0.213 1.213 22 H -0.218 1.218 23 H -0.213 1.213 24 C -0.220 4.220 25 N -0.055 5.055 26 H 0.105 0.895 27 H 0.114 0.886 28 H 0.126 0.874 29 H 0.206 0.794 30 H 0.261 0.739 31 H 0.106 0.894 32 H 0.087 0.913 33 H 0.220 0.780 34 H 0.064 0.936 35 H 0.093 0.907 36 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 1.448 11.704 -4.585 12.653 hybrid contribution -0.867 0.287 -0.021 0.914 sum 0.580 11.991 -4.606 12.858 Atomic orbital electron populations 1.22280 0.72198 1.06125 1.04684 1.45425 1.08098 1.02588 1.50474 1.22564 0.89432 0.94220 1.09324 1.20785 0.89019 0.91022 1.13269 1.98340 1.36064 1.67147 1.97215 1.21967 0.91570 0.92297 1.10794 1.16791 0.86254 0.81829 0.76791 1.90776 1.21977 1.77277 1.50888 1.45781 1.11465 1.04352 1.72318 1.21732 0.89038 0.89477 0.97564 0.89137 1.23720 0.99994 0.98982 0.97585 1.21211 0.85950 0.95765 0.92048 0.92979 1.42256 1.00440 1.19795 1.72578 1.19169 0.87396 0.96998 1.33758 0.91083 1.24729 0.97179 0.97271 1.01372 1.69673 1.17266 1.23138 1.47347 0.86282 0.81167 0.80910 0.77853 1.21310 1.21825 1.21312 1.24072 1.01484 0.94866 1.01627 1.73947 1.01884 1.13184 1.16498 0.89490 0.88578 0.87425 0.79421 0.73876 0.89415 0.91292 0.77954 0.93573 0.90680 0.90049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.75 11.32 59.85 0.68 1.43 16 2 N -0.28 -3.71 3.72 -67.94 -0.25 -3.96 16 3 C -0.01 -0.14 11.49 -16.86 -0.19 -0.34 16 4 C -0.10 -1.60 6.80 -39.31 -0.27 -1.87 16 5 Cl -0.02 -0.24 28.17 -51.86 -1.46 -1.70 16 6 C 0.00 -0.09 7.13 -82.76 -0.59 -0.68 16 7 C 0.60 11.84 7.82 -12.41 -0.10 11.75 16 8 O -0.53 -11.16 15.52 5.30 0.08 -11.08 16 9 N -0.69 -13.38 4.95 -54.02 -0.27 -13.65 16 10 C 0.13 2.27 4.28 -67.12 -0.29 1.99 16 11 H 0.09 1.56 7.55 -51.93 -0.39 1.17 16 12 C -0.16 -2.87 7.58 -25.92 -0.20 -3.06 16 13 C 0.16 3.20 4.53 -67.12 -0.30 2.90 16 14 H 0.05 1.03 8.14 -51.93 -0.42 0.60 16 15 N -0.71 -17.20 4.41 -52.64 -0.23 -17.43 16 16 C -0.24 -6.47 9.99 -15.06 -0.15 -6.62 16 17 H 0.07 1.85 7.83 -52.49 -0.41 1.44 16 18 C -0.01 -0.25 5.50 -17.43 -0.10 -0.35 16 19 N -0.93 -26.47 13.06 55.49 0.72 -25.75 16 20 Si 0.91 21.65 29.55 -169.99 -5.02 16.62 16 21 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 22 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 23 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 24 C -0.18 -3.14 7.61 -25.92 -0.20 -3.34 16 25 N -0.22 -3.89 11.66 33.42 0.39 -3.50 16 26 H 0.09 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.10 0.49 8.13 -51.93 -0.42 0.07 16 28 H 0.11 1.09 8.14 -51.93 -0.42 0.67 16 29 H 0.19 1.40 8.06 -52.49 -0.42 0.98 16 30 H 0.42 8.99 6.90 -40.82 -0.28 8.71 16 31 H 0.09 1.29 8.14 -51.93 -0.42 0.87 16 32 H 0.07 1.32 8.14 -51.93 -0.42 0.90 16 33 H 0.39 10.01 6.98 -40.82 -0.29 9.73 16 34 H 0.25 7.08 8.31 -40.82 -0.34 6.74 16 35 H 0.07 1.45 8.14 -51.93 -0.42 1.03 16 36 H 0.08 1.20 8.14 -51.93 -0.42 0.78 16 LS Contribution 327.16 15.07 4.93 4.93 Total: -1.00 -32.13 327.16 -7.12 -39.25 By element: Atomic # 1 Polarization: 18.77 SS G_CDS: -4.31 Total: 14.46 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: -1.70 Total: 1.80 kcal Atomic # 7 Polarization: -64.65 SS G_CDS: 0.36 Total: -64.28 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: 0.08 Total: -11.08 kcal Atomic # 14 Polarization: 21.65 SS G_CDS: -5.02 Total: 16.62 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -1.46 Total: -1.70 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -32.13 -7.12 -39.25 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001022132659.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.769 kcal (2) G-P(sol) polarization free energy of solvation -32.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.248 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds