Wall clock time and date at job start Tue Mar 31 2020 04:39:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 N 1.40078 * 126.03632 * 2 1 4 4 C 1.30835 * 108.20414 * 180.02562 * 3 2 1 5 5 C 1.39867 * 108.20391 * 359.78057 * 4 3 2 6 6 C 1.34942 * 126.03533 * 180.02562 * 2 1 3 7 7 C 1.50701 * 126.12730 * 359.94220 * 6 2 1 8 8 O 1.42903 * 109.46878 * 179.97438 * 7 6 2 9 9 C 1.42899 * 113.99629 * 179.97438 * 8 7 6 10 10 C 1.50700 * 109.47140 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00000 * 359.97438 * 10 9 8 12 12 N 1.34780 * 120.00301 * 180.02562 * 10 9 8 13 13 C 1.46501 * 120.00017 * 179.97438 * 12 10 9 14 14 C 1.50696 * 109.47003 * 89.99701 * 13 12 10 15 15 H 1.07996 * 120.00571 * 359.97438 * 14 13 12 16 16 C 1.37877 * 119.99934 * 179.97438 * 14 13 12 17 17 N 1.31522 * 119.99776 * 0.02562 * 16 14 13 18 18 Si 1.86802 * 120.00304 * 179.97438 * 16 14 13 19 19 H 1.48502 * 109.46804 * 90.00145 * 18 16 14 20 20 H 1.48504 * 109.47026 * 210.00193 * 18 16 14 21 21 H 1.48498 * 109.47241 * 330.00032 * 18 16 14 22 22 C 1.46495 * 119.99833 * 359.97438 * 12 10 9 23 23 C 1.53001 * 109.46971 * 90.00246 * 22 12 10 24 24 C 1.47204 * 109.47237 * 179.97438 * 23 22 12 25 25 N 9.31808 * 79.26829 * 189.04840 * 2 1 3 26 26 H 1.09004 * 109.46977 * 269.97506 * 1 2 3 27 27 H 1.09004 * 109.47012 * 29.96800 * 1 2 3 28 28 H 1.08994 * 109.47199 * 149.97712 * 1 2 3 29 29 H 1.08001 * 125.89995 * 180.02562 * 4 3 2 30 30 H 1.08002 * 126.04530 * 180.23700 * 5 4 3 31 31 H 1.09002 * 109.47060 * 299.99858 * 7 6 2 32 32 H 1.09001 * 109.47380 * 59.99945 * 7 6 2 33 33 H 1.09007 * 109.47484 * 299.99646 * 9 8 7 34 34 H 1.09004 * 109.47459 * 59.99983 * 9 8 7 35 35 H 1.09001 * 109.46980 * 209.99769 * 13 12 10 36 36 H 1.08997 * 109.47188 * 329.99424 * 13 12 10 37 37 H 0.97001 * 119.99903 * 180.02562 * 17 16 14 38 38 H 1.09000 * 109.47359 * 210.00371 * 22 12 10 39 39 H 1.09001 * 109.47512 * 330.00444 * 22 12 10 40 40 H 1.09001 * 109.47611 * 299.99918 * 23 22 12 41 41 H 1.09001 * 109.46991 * 60.00739 * 23 22 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2891 1.1327 0.0000 4 6 3.5346 0.7321 -0.0006 5 6 3.5437 -0.6666 0.0042 6 6 2.2589 -1.0912 -0.0005 7 6 1.7973 -2.5258 0.0001 8 8 2.9339 -3.3919 -0.0013 9 6 2.6049 -4.7825 -0.0003 10 6 3.8719 -5.5984 -0.0013 11 8 4.9505 -5.0437 -0.0032 12 7 3.8066 -6.9446 -0.0011 13 6 5.0384 -7.7378 -0.0026 14 6 5.4625 -8.0096 1.4176 15 1 4.8738 -7.6292 2.2393 16 6 6.6023 -8.7439 1.6682 17 7 7.3195 -9.2067 0.6676 18 14 7.1286 -9.0802 3.4287 19 1 6.5094 -10.3461 3.8971 20 1 8.6075 -9.2005 3.4888 21 1 6.6872 -7.9614 4.2996 22 6 2.5039 -7.6147 0.0006 23 6 2.0486 -7.8481 -1.4413 24 6 0.7399 -8.5220 -1.4396 25 7 -0.2701 -9.0412 -1.4398 26 1 -0.3633 -0.0004 1.0277 27 1 -0.3633 0.8903 -0.5134 28 1 -0.3633 -0.8897 -0.5142 29 1 4.4054 1.3710 -0.0003 30 1 4.4211 -1.2964 0.0086 31 1 1.1976 -2.7141 0.8906 32 1 1.1961 -2.7144 -0.8894 33 1 2.0226 -5.0175 0.8907 34 1 2.0199 -5.0182 -0.8893 35 1 4.8613 -8.6828 -0.5161 36 1 5.8250 -7.1863 -0.5176 37 1 8.1212 -9.7236 0.8438 38 1 2.5885 -8.5723 0.5145 39 1 1.7743 -6.9895 0.5153 40 1 1.9639 -6.8906 -1.9552 41 1 2.7781 -8.4735 -1.9559 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000284046816.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:39:22 Heat of formation + Delta-G solvation = 35.368675 kcal Electronic energy + Delta-G solvation = -24239.670284 eV Core-core repulsion = 20543.544151 eV Total energy + Delta-G solvation = -3696.126133 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 306.148 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.30773 -39.49812 -37.62785 -36.86697 -35.26735 -33.50766 -32.94038 -31.39441 -30.91377 -28.81037 -26.95566 -26.76972 -25.70349 -24.09021 -22.69292 -21.16429 -20.07549 -18.79801 -17.76584 -17.13062 -16.98355 -16.58599 -16.41409 -15.89819 -15.52492 -15.40314 -14.76103 -14.57045 -14.34291 -14.22795 -13.75705 -13.68108 -13.39299 -13.00191 -12.86711 -12.61067 -12.57348 -12.50908 -12.30123 -12.03445 -11.80169 -11.59709 -11.31260 -11.05014 -10.93329 -10.79280 -10.64808 -10.21342 -10.01206 -9.73871 -9.34671 -9.04178 -8.55361 -8.49305 -7.92120 -6.11048 -4.15848 1.70377 2.20930 2.65313 2.73994 2.81271 3.10772 3.21582 3.27664 3.35435 3.39965 3.77603 4.18073 4.35465 4.39852 4.53123 4.78991 4.82189 4.84778 4.97534 4.97943 5.02745 5.04621 5.11164 5.13446 5.21201 5.25253 5.42246 5.59691 5.72296 5.74647 5.98664 6.17280 6.63045 6.70585 6.85117 7.00739 7.30463 7.38281 7.50003 7.59038 7.84947 8.13215 8.16867 8.79162 8.93013 9.49908 10.97108 Molecular weight = 306.15amu Principal moments of inertia in cm(-1) A = 0.011338 B = 0.003506 C = 0.002826 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2469.028504 B = 7984.968178 C = 9904.551663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.100 3.900 2 N -0.375 5.375 3 N -0.298 5.298 4 C 0.044 3.956 5 C -0.236 4.236 6 C 0.073 3.927 7 C 0.129 3.871 8 O -0.346 6.346 9 C 0.042 3.958 10 C 0.509 3.491 11 O -0.507 6.507 12 N -0.596 5.596 13 C 0.246 3.754 14 C -0.531 4.531 15 H 0.059 0.941 16 C 0.063 3.937 17 N -0.893 5.893 18 Si 0.897 3.103 19 H -0.281 1.281 20 H -0.285 1.285 21 H -0.274 1.274 22 C 0.116 3.884 23 C -0.052 4.052 24 C 0.217 3.783 25 N -0.445 5.445 26 H 0.074 0.926 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.185 0.815 30 H 0.159 0.841 31 H 0.068 0.932 32 H 0.067 0.933 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.037 0.963 36 H 0.048 0.952 37 H 0.264 0.736 38 H 0.097 0.903 39 H 0.074 0.926 40 H 0.106 0.894 41 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.528 12.100 -3.636 19.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 N -0.161 5.161 3 N -0.120 5.120 4 C -0.141 4.141 5 C -0.265 4.265 6 C -0.054 4.054 7 C 0.050 3.950 8 O -0.263 6.263 9 C -0.038 4.038 10 C 0.294 3.706 11 O -0.381 6.381 12 N -0.330 5.330 13 C 0.128 3.872 14 C -0.569 4.569 15 H 0.077 0.923 16 C -0.139 4.139 17 N -0.532 5.532 18 Si 0.725 3.275 19 H -0.207 1.207 20 H -0.211 1.211 21 H -0.198 1.198 22 C -0.011 4.011 23 C -0.093 4.093 24 C -0.102 4.102 25 N -0.122 5.122 26 H 0.092 0.908 27 H 0.108 0.892 28 H 0.103 0.897 29 H 0.202 0.798 30 H 0.176 0.824 31 H 0.086 0.914 32 H 0.085 0.915 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.055 0.945 36 H 0.066 0.934 37 H 0.074 0.926 38 H 0.116 0.884 39 H 0.092 0.908 40 H 0.124 0.876 41 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -15.987 12.592 -3.679 20.681 hybrid contribution 0.904 -0.920 0.975 1.617 sum -15.084 11.672 -2.703 19.263 Atomic orbital electron populations 1.21842 0.74622 1.04388 1.03336 1.48359 1.06300 1.02980 1.58427 1.77348 1.02068 1.07252 1.25301 1.23935 0.95096 0.95356 0.99713 1.21446 0.97080 0.94521 1.13484 1.20532 0.91957 0.89386 1.03494 1.20569 0.88653 0.84716 1.01017 1.88043 1.28585 1.14328 1.95380 1.22479 0.97274 0.82083 1.02011 1.19844 0.89833 0.82655 0.78311 1.90736 1.29840 1.70211 1.47316 1.48172 1.07756 1.04794 1.72244 1.19379 0.80075 0.89959 0.97777 1.21412 1.09651 1.33625 0.92258 0.92316 1.24915 0.96019 0.95588 0.97414 1.69918 1.16431 1.36102 1.30723 0.86510 0.77886 0.78488 0.84640 1.20668 1.21069 1.19835 1.21340 0.85949 1.00700 0.93102 1.19926 0.86857 1.00993 1.01561 1.29084 0.94537 0.93399 0.93136 1.81200 1.12544 1.09843 1.08602 0.90760 0.89230 0.89713 0.79799 0.82359 0.91398 0.91470 0.90429 0.90660 0.94513 0.93409 0.92623 0.88447 0.90799 0.87607 0.86279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.64 11.27 59.85 0.67 1.31 16 2 N -0.38 -4.22 4.01 -63.88 -0.26 -4.48 16 3 N -0.30 -3.89 12.58 30.62 0.39 -3.51 16 4 C 0.04 0.54 12.03 -17.37 -0.21 0.33 16 5 C -0.24 -3.19 10.14 -40.01 -0.41 -3.59 16 6 C 0.07 0.88 6.91 -82.26 -0.57 0.31 16 7 C 0.13 1.29 5.90 36.01 0.21 1.50 16 8 O -0.35 -4.84 9.17 -55.14 -0.51 -5.35 16 9 C 0.04 0.51 4.97 36.01 0.18 0.69 16 10 C 0.51 9.15 7.75 -10.98 -0.09 9.06 16 11 O -0.51 -11.94 16.08 -14.35 -0.23 -12.17 16 12 N -0.60 -10.35 2.46 -175.06 -0.43 -10.78 16 13 C 0.25 5.66 5.16 -5.20 -0.03 5.63 16 14 C -0.53 -13.89 9.39 -34.44 -0.32 -14.22 16 15 H 0.06 1.54 7.81 -52.49 -0.41 1.13 16 16 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 17 N -0.89 -25.15 13.29 55.43 0.74 -24.41 16 18 Si 0.90 20.99 29.54 -169.99 -5.02 15.97 16 19 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 20 H -0.29 -6.68 7.11 56.52 0.40 -6.27 16 21 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 22 C 0.12 1.38 5.17 -4.04 -0.02 1.36 16 23 C -0.05 -0.48 6.03 -29.52 -0.18 -0.65 16 24 C 0.22 2.36 15.43 -20.77 -0.32 2.04 16 25 N -0.44 -6.06 18.53 42.14 0.78 -5.28 16 26 H 0.07 0.39 8.14 -51.93 -0.42 -0.04 16 27 H 0.09 0.50 8.14 -51.93 -0.42 0.08 16 28 H 0.08 0.34 7.79 -51.93 -0.40 -0.06 16 29 H 0.19 1.65 8.06 -52.49 -0.42 1.23 16 30 H 0.16 2.29 7.85 -52.49 -0.41 1.88 16 31 H 0.07 0.54 8.14 -51.93 -0.42 0.12 16 32 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.08 0.77 7.40 -51.93 -0.38 0.38 16 34 H 0.08 0.64 7.18 -51.93 -0.37 0.27 16 35 H 0.04 0.83 8.07 -51.93 -0.42 0.41 16 36 H 0.05 1.27 7.42 -51.93 -0.39 0.88 16 37 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 38 H 0.10 1.26 8.07 -51.93 -0.42 0.84 16 39 H 0.07 0.69 6.44 -51.93 -0.33 0.35 16 40 H 0.11 0.74 7.22 -51.93 -0.37 0.37 16 41 H 0.12 1.11 8.14 -51.93 -0.42 0.68 16 LS Contribution 364.91 15.07 5.50 5.50 Total: -1.00 -36.26 364.91 -5.80 -42.06 By element: Atomic # 1 Polarization: 2.65 SS G_CDS: -5.59 Total: -2.94 kcal Atomic # 6 Polarization: 6.55 SS G_CDS: -1.17 Total: 5.38 kcal Atomic # 7 Polarization: -49.67 SS G_CDS: 1.22 Total: -48.46 kcal Atomic # 8 Polarization: -16.78 SS G_CDS: -0.74 Total: -17.52 kcal Atomic # 14 Polarization: 20.99 SS G_CDS: -5.02 Total: 15.97 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -36.26 -5.80 -42.06 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000284046816.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.430 kcal (2) G-P(sol) polarization free energy of solvation -36.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.061 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds