Wall clock time and date at job start Tue Mar 31 2020 04:08:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47309 * 85.16527 * 3 2 1 5 5 C 1.33328 * 119.99658 * 274.25553 * 4 3 2 6 6 H 1.07999 * 120.00142 * 142.26161 * 5 4 3 7 7 C 1.46791 * 120.00109 * 322.26125 * 5 4 3 8 8 N 1.29322 * 119.99833 * 157.14502 * 7 5 4 9 9 Si 1.86799 * 119.99968 * 337.15142 * 7 5 4 10 10 H 1.48502 * 109.46944 * 94.72252 * 9 7 5 11 11 H 1.48503 * 109.46858 * 214.71957 * 9 7 5 12 12 H 1.48501 * 109.47108 * 334.72030 * 9 7 5 13 13 C 1.34771 * 120.00571 * 94.25526 * 4 3 2 14 14 O 1.21481 * 120.00243 * 184.89728 * 13 4 3 15 15 C 1.47638 * 119.99479 * 4.90171 * 13 4 3 16 16 C 1.39730 * 120.13376 * 311.97249 * 15 13 4 17 17 C 1.37846 * 119.85098 * 180.25557 * 16 15 13 18 18 C 1.38562 * 120.13928 * 359.43211 * 17 16 15 19 19 Cl 1.73602 * 119.85757 * 180.29875 * 18 17 16 20 20 C 1.38510 * 120.28317 * 0.59571 * 18 17 16 21 21 N 1.48016 * 119.93083 * 179.70337 * 20 18 17 22 22 O 1.31707 * 119.99704 * 179.97438 * 21 20 18 23 23 O 1.31693 * 119.99892 * 359.97438 * 21 20 18 24 24 C 1.37885 * 120.13849 * 359.68121 * 20 18 17 25 25 H 1.09001 * 109.47218 * 325.16311 * 3 2 1 26 26 H 1.09003 * 109.47019 * 205.16447 * 3 2 1 27 27 H 0.96995 * 119.99518 * 179.97438 * 8 7 5 28 28 H 1.07992 * 120.07856 * 359.97438 * 16 15 13 29 29 H 1.07995 * 119.92737 * 179.70221 * 17 16 15 30 30 H 1.08002 * 120.07175 * 180.02562 * 24 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0964 -0.1155 -1.3763 5 6 3.2384 -1.3183 -1.9339 6 1 2.9969 -1.4619 -2.9767 7 6 3.7229 -2.4472 -1.1305 8 7 3.4570 -3.6598 -1.4927 9 14 4.7234 -2.1322 0.4152 10 1 3.8228 -2.1301 1.5959 11 1 5.7422 -3.2013 0.5717 12 1 5.4006 -0.8151 0.3067 13 6 3.4023 0.9932 -2.0788 14 8 3.7219 0.9031 -3.2473 15 6 3.3489 2.3174 -1.4280 16 6 2.2339 2.6815 -0.6688 17 6 2.1879 3.9213 -0.0681 18 6 3.2494 4.8011 -0.2062 19 17 3.1872 6.3577 0.5598 20 6 4.3574 4.4463 -0.9580 21 7 5.4841 5.3947 -1.1058 22 8 6.5385 5.0585 -1.8199 23 8 5.4323 6.5747 -0.5233 24 6 4.4131 3.2113 -1.5686 25 1 2.9717 -0.8427 0.5870 26 1 2.9709 0.9310 0.4370 27 1 3.7774 -4.4058 -0.9620 28 1 1.4079 1.9949 -0.5565 29 1 1.3246 4.2058 0.5150 30 1 5.2777 2.9356 -2.1542 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000000123343.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:08:21 Heat of formation + Delta-G solvation = 85.018243 kcal Electronic energy + Delta-G solvation = -22497.403564 eV Core-core repulsion = 18711.610138 eV Total energy + Delta-G solvation = -3785.793426 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 309.035 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -40.81791 -39.32978 -38.04194 -36.89937 -36.66271 -35.06597 -34.41733 -32.97604 -32.14166 -31.45210 -28.29629 -26.81966 -25.85514 -23.34643 -22.81055 -20.28607 -19.09093 -18.54375 -18.09614 -17.37108 -16.90875 -16.50692 -16.13214 -16.06237 -15.69299 -14.81600 -14.56263 -14.02159 -13.99849 -13.76225 -13.37168 -13.00697 -12.82548 -12.62274 -12.31166 -12.15654 -12.12375 -11.93009 -11.82623 -11.31729 -11.26363 -10.87879 -10.66620 -10.42377 -10.41460 -9.91399 -9.70333 -9.33401 -9.09660 -8.58458 -7.03980 -4.29706 -0.83800 0.34703 0.85090 0.92598 1.52739 2.53483 2.59753 2.75781 2.79476 2.87774 2.92669 3.28309 3.62091 3.79328 3.94181 4.04004 4.36618 4.41027 4.53172 4.60742 4.69433 5.03535 5.16941 5.23637 5.36627 5.44308 5.55559 5.76930 5.99947 6.69478 6.72170 7.59639 7.70817 7.93228 8.34492 8.71378 9.24353 10.01580 Molecular weight = 309.03amu Principal moments of inertia in cm(-1) A = 0.018274 B = 0.004774 C = 0.004307 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1531.862318 B = 5863.311552 C = 6500.080625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.423 5.423 2 C 0.201 3.799 3 C 0.164 3.836 4 N -0.410 5.410 5 C -0.361 4.361 6 H 0.117 0.883 7 C 0.076 3.924 8 N -0.793 5.793 9 Si 0.859 3.141 10 H -0.262 1.262 11 H -0.270 1.270 12 H -0.247 1.247 13 C 0.478 3.522 14 O -0.535 6.535 15 C -0.092 4.092 16 C -0.055 4.055 17 C -0.106 4.106 18 C 0.010 3.990 19 Cl -0.007 7.007 20 C 0.001 3.999 21 N -0.019 5.019 22 O -0.172 6.172 23 O -0.149 6.149 24 C -0.002 4.002 25 H 0.111 0.889 26 H 0.112 0.888 27 H 0.291 0.709 28 H 0.150 0.850 29 H 0.161 0.839 30 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.497 11.020 8.363 13.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.102 5.102 2 C -0.117 4.117 3 C 0.038 3.962 4 N -0.128 5.128 5 C -0.489 4.489 6 H 0.135 0.865 7 C -0.144 4.144 8 N -0.421 5.421 9 Si 0.683 3.317 10 H -0.188 1.188 11 H -0.195 1.195 12 H -0.171 1.171 13 C 0.269 3.731 14 O -0.416 6.416 15 C -0.097 4.097 16 C -0.075 4.075 17 C -0.125 4.125 18 C -0.020 4.020 19 Cl 0.022 6.978 20 C -0.086 4.086 21 N 0.461 4.539 22 O -0.362 6.362 23 O -0.347 6.347 24 C -0.022 4.022 25 H 0.129 0.871 26 H 0.130 0.870 27 H 0.103 0.897 28 H 0.167 0.833 29 H 0.178 0.822 30 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -2.476 10.379 7.867 13.257 hybrid contribution 1.171 0.205 0.901 1.491 sum -1.305 10.584 8.768 13.806 Atomic orbital electron populations 1.81145 1.12710 1.08784 1.07582 1.29710 0.95571 0.92907 0.93532 1.19822 0.81602 1.05065 0.89728 1.42284 1.53356 1.06586 1.10545 1.19971 1.47766 0.82113 0.99021 0.86522 1.27095 0.94731 0.94316 0.98213 1.68701 1.35038 0.99920 1.38398 0.87194 0.81580 0.81229 0.81692 1.18845 1.19529 1.17062 1.17727 0.84675 0.82441 0.88284 1.90713 1.50802 1.85074 1.14961 1.20507 0.93711 0.96804 0.98666 1.22063 0.97413 0.95675 0.92359 1.21089 0.97628 0.92422 1.01393 1.20878 0.93834 0.90826 0.96441 1.98461 1.98033 1.22983 1.78304 1.19914 0.88039 0.91915 1.08730 1.50275 1.02386 1.02406 0.98826 1.96309 1.19693 1.82936 1.37302 1.96311 1.88076 1.03766 1.46527 1.21081 0.99596 0.88164 0.93387 0.87139 0.87003 0.89668 0.83277 0.82179 0.81065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 45. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -7.44 18.54 42.16 0.78 -6.66 16 2 C 0.20 3.30 13.00 -20.76 -0.27 3.03 16 3 C 0.16 2.60 4.43 -6.83 -0.03 2.57 16 4 N -0.41 -8.23 2.13 -117.53 -0.25 -8.48 16 5 C -0.36 -8.59 9.53 -13.45 -0.13 -8.72 16 6 H 0.12 3.21 7.82 -52.49 -0.41 2.80 16 7 C 0.08 1.73 5.48 -15.15 -0.08 1.64 16 8 N -0.79 -19.03 13.88 56.00 0.78 -18.26 16 9 Si 0.86 15.86 25.28 -169.99 -4.30 11.56 16 10 H -0.26 -4.33 6.74 56.52 0.38 -3.95 16 11 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 12 H -0.25 -4.40 7.11 56.52 0.40 -4.00 16 13 C 0.48 9.48 7.17 -12.43 -0.09 9.39 16 14 O -0.53 -12.76 16.82 5.38 0.09 -12.67 16 15 C -0.09 -1.40 4.95 -104.96 -0.52 -1.92 16 16 C -0.06 -0.68 7.54 -39.17 -0.30 -0.97 16 17 C -0.11 -1.08 9.81 -39.61 -0.39 -1.47 16 18 C 0.01 0.11 6.33 -39.36 -0.25 -0.14 16 19 Cl -0.01 -0.08 25.75 -51.86 -1.34 -1.42 16 20 C 0.00 0.02 6.88 -79.98 -0.55 -0.53 16 21 N -0.02 -0.30 4.98 33.95 0.17 -0.13 16 22 O -0.17 -2.88 19.14 -31.57 -0.60 -3.48 16 23 O -0.15 -2.32 16.57 -31.56 -0.52 -2.85 16 24 C 0.00 -0.03 9.24 -39.17 -0.36 -0.39 16 25 H 0.11 1.77 3.21 -51.93 -0.17 1.60 16 26 H 0.11 1.34 5.51 -51.93 -0.29 1.05 16 27 H 0.29 6.27 8.26 -40.82 -0.34 5.94 16 28 H 0.15 1.85 4.60 -52.49 -0.24 1.61 16 29 H 0.16 1.14 8.06 -52.49 -0.42 0.71 16 30 H 0.17 2.55 7.57 -52.49 -0.40 2.16 16 LS Contribution 293.42 15.07 4.42 4.42 Total: -1.00 -27.39 293.42 -4.81 -32.20 By element: Atomic # 1 Polarization: 4.34 SS G_CDS: -1.08 Total: 3.26 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: -2.97 Total: 2.49 kcal Atomic # 7 Polarization: -35.00 SS G_CDS: 1.48 Total: -33.52 kcal Atomic # 8 Polarization: -17.96 SS G_CDS: -1.04 Total: -19.00 kcal Atomic # 14 Polarization: 15.86 SS G_CDS: -4.30 Total: 11.56 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.34 Total: -1.42 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -27.39 -4.81 -32.20 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000000123343.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.217 kcal (2) G-P(sol) polarization free energy of solvation -27.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.199 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds