Wall clock time and date at job start Tue Mar 31 2020 04:08:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47328 * 37.20411 * 3 2 1 5 5 C 1.33323 * 120.00014 * 271.94367 * 4 3 2 6 6 H 1.08000 * 120.00130 * 201.11433 * 5 4 3 7 7 C 1.46792 * 119.99827 * 20.84410 * 5 4 3 8 8 N 1.29311 * 120.00083 * 2.76205 * 7 5 4 9 9 Si 1.86799 * 119.99828 * 182.75978 * 7 5 4 10 10 H 1.48499 * 109.47215 * 359.97438 * 9 7 5 11 11 H 1.48505 * 109.47089 * 119.99850 * 9 7 5 12 12 H 1.48500 * 109.47338 * 240.00037 * 9 7 5 13 13 C 1.34777 * 119.99761 * 91.94420 * 4 3 2 14 14 O 1.21487 * 119.99733 * 174.67278 * 13 4 3 15 15 C 1.47625 * 120.00094 * 354.67463 * 13 4 3 16 16 C 1.39723 * 120.14239 * 299.83121 * 15 13 4 17 17 C 1.37840 * 119.86273 * 180.02562 * 16 15 13 18 18 C 1.38558 * 120.13735 * 359.97181 * 17 16 15 19 19 Cl 1.73602 * 119.85655 * 180.02562 * 18 17 16 20 20 C 1.38510 * 120.28438 * 0.05081 * 18 17 16 21 21 C 1.37892 * 120.13651 * 359.67142 * 20 18 17 22 22 N 1.48021 * 120.06723 * 180.29759 * 21 20 18 23 23 O 1.31692 * 120.00703 * 353.46429 * 22 21 20 24 24 O 1.31703 * 119.99418 * 173.46539 * 22 21 20 25 25 H 1.08999 * 109.46809 * 277.20169 * 3 2 1 26 26 H 1.08999 * 109.46831 * 157.20797 * 3 2 1 27 27 H 0.97001 * 119.99885 * 180.02562 * 8 7 5 28 28 H 1.08006 * 120.06653 * 0.02562 * 16 15 13 29 29 H 1.07999 * 119.92940 * 179.97438 * 17 16 15 30 30 H 1.08005 * 119.93501 * 179.97438 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.0992 -0.8351 5 6 3.2827 -2.3078 -0.3039 6 1 3.9414 -3.0145 -0.7868 7 6 2.5967 -2.6760 0.9405 8 7 1.7710 -1.8482 1.4929 9 14 2.9164 -4.3404 1.7260 10 1 3.8946 -5.0964 0.9033 11 1 3.4641 -4.1457 3.0926 12 1 1.6444 -5.1024 1.8064 13 6 3.3588 -0.8892 -2.1404 14 8 3.8550 -1.7730 -2.8102 15 6 3.0427 0.4147 -2.7562 16 6 1.7266 0.8837 -2.7696 17 6 1.4379 2.1018 -3.3466 18 6 2.4497 2.8610 -3.9121 19 17 2.0780 4.3943 -4.6362 20 6 3.7563 2.4015 -3.9025 21 6 4.0590 1.1873 -3.3233 22 7 5.4569 0.7008 -3.3082 23 8 6.3916 1.3623 -3.9585 24 8 5.7659 -0.3939 -2.6442 25 1 2.9714 -0.1280 1.0196 26 1 2.9709 0.9482 -0.3981 27 1 1.3179 -2.0914 2.3154 28 1 0.9372 0.2931 -2.3287 29 1 0.4210 2.4652 -3.3579 30 1 4.5405 2.9977 -4.3453 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000000288697.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:08:18 Heat of formation + Delta-G solvation = 71.687421 kcal Electronic energy + Delta-G solvation = -23077.426480 eV Core-core repulsion = 19291.054987 eV Total energy + Delta-G solvation = -3786.371494 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 309.035 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -40.54002 -38.62878 -37.92903 -36.67339 -36.05497 -34.58716 -33.82015 -32.57763 -31.82089 -31.17568 -27.81853 -26.67183 -25.24785 -23.36273 -22.34097 -20.21228 -18.43640 -18.34876 -17.60921 -17.24399 -16.65007 -16.01629 -15.61599 -15.45184 -15.21650 -14.64456 -14.45746 -13.78189 -13.58640 -13.40754 -13.30041 -12.61022 -12.40897 -12.10935 -11.88581 -11.73288 -11.54077 -11.48011 -11.34166 -10.82571 -10.78409 -10.73096 -10.57113 -10.44787 -10.11475 -9.67535 -9.56005 -9.18937 -8.81598 -8.59310 -7.04141 -4.10127 -0.50444 0.57695 1.20567 1.35848 1.84980 2.78773 2.98360 3.02300 3.07664 3.41134 3.46690 3.72637 3.83203 4.21618 4.33601 4.45314 4.52934 4.74022 4.78375 4.88398 5.16719 5.33248 5.48445 5.66824 5.76392 5.84154 5.99255 6.27142 6.32681 6.77951 7.24494 7.48779 7.95716 8.48912 8.60040 8.78293 9.48667 9.95494 Molecular weight = 309.03amu Principal moments of inertia in cm(-1) A = 0.017865 B = 0.005314 C = 0.004297 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1566.951469 B = 5267.959770 C = 6514.544042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.470 5.470 2 C 0.254 3.746 3 C 0.209 3.791 4 N -0.392 5.392 5 C -0.312 4.312 6 H 0.125 0.875 7 C 0.039 3.961 8 N -0.835 5.835 9 Si 0.944 3.056 10 H -0.256 1.256 11 H -0.274 1.274 12 H -0.276 1.276 13 C 0.457 3.543 14 O -0.540 6.540 15 C -0.028 4.028 16 C -0.088 4.088 17 C -0.061 4.061 18 C -0.043 4.043 19 Cl -0.048 7.048 20 C -0.049 4.049 21 C 0.028 3.972 22 N -0.024 5.024 23 O -0.228 6.228 24 O -0.104 6.104 25 H 0.136 0.864 26 H 0.078 0.922 27 H 0.290 0.710 28 H 0.155 0.845 29 H 0.153 0.847 30 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.362 9.719 -3.063 10.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.064 4.064 3 C 0.082 3.918 4 N -0.108 5.108 5 C -0.442 4.442 6 H 0.143 0.857 7 C -0.174 4.174 8 N -0.469 5.469 9 Si 0.768 3.232 10 H -0.180 1.180 11 H -0.199 1.199 12 H -0.202 1.202 13 C 0.247 3.753 14 O -0.422 6.422 15 C -0.034 4.034 16 C -0.107 4.107 17 C -0.081 4.081 18 C -0.071 4.071 19 Cl -0.019 7.019 20 C -0.069 4.069 21 C -0.061 4.061 22 N 0.448 4.552 23 O -0.401 6.401 24 O -0.308 6.308 25 H 0.153 0.847 26 H 0.096 0.904 27 H 0.103 0.897 28 H 0.172 0.828 29 H 0.170 0.830 30 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -3.423 9.727 -3.372 10.849 hybrid contribution 0.730 -0.584 0.489 1.055 sum -2.693 9.143 -2.883 9.957 Atomic orbital electron populations 1.80941 1.13098 1.10561 1.10523 1.28888 0.95009 0.91204 0.91294 1.18977 0.82358 0.90139 1.00304 1.42477 1.53042 1.09273 1.05966 1.21020 1.25615 0.90894 1.06623 0.85706 1.27087 0.93577 1.00157 0.96550 1.68601 1.22667 1.36855 1.18823 0.85535 0.79122 0.79779 0.78717 1.17988 1.19905 1.20190 1.17275 0.89090 0.86427 0.82514 1.90700 1.47547 1.43269 1.60684 1.20441 0.92305 0.94665 0.96030 1.21493 0.95198 0.95501 0.98547 1.21368 0.99710 0.93096 0.93894 1.20615 0.93329 0.90391 1.02787 1.98392 1.94484 1.27490 1.81570 1.20706 0.96709 0.93529 0.95973 1.20034 0.80113 0.96320 1.09653 1.50130 1.03132 1.01686 1.00288 1.96203 1.41203 1.57561 1.45169 1.96412 1.88615 1.07082 1.38661 0.84668 0.90362 0.89731 0.82777 0.82979 0.82025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 50. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -9.63 18.31 42.15 0.77 -8.86 16 2 C 0.25 4.91 10.33 -20.76 -0.21 4.69 16 3 C 0.21 3.85 4.78 -6.83 -0.03 3.82 16 4 N -0.39 -8.55 2.49 -117.53 -0.29 -8.84 16 5 C -0.31 -7.32 9.56 -13.45 -0.13 -7.45 16 6 H 0.13 3.14 7.36 -52.49 -0.39 2.75 16 7 C 0.04 0.85 5.44 -15.16 -0.08 0.76 16 8 N -0.83 -18.01 8.42 56.00 0.47 -17.53 16 9 Si 0.94 17.63 29.65 -169.99 -5.04 12.59 16 10 H -0.26 -4.89 7.11 56.52 0.40 -4.49 16 11 H -0.27 -4.98 7.11 56.52 0.40 -4.57 16 12 H -0.28 -5.27 7.11 56.52 0.40 -4.87 16 13 C 0.46 10.18 5.34 -12.43 -0.07 10.12 16 14 O -0.54 -14.05 14.72 -18.18 -0.27 -14.32 16 15 C -0.03 -0.51 4.26 -104.97 -0.45 -0.96 16 16 C -0.09 -1.32 8.02 -39.17 -0.31 -1.64 16 17 C -0.06 -0.73 9.81 -39.61 -0.39 -1.12 16 18 C -0.04 -0.51 6.33 -39.36 -0.25 -0.76 16 19 Cl -0.05 -0.48 28.95 -51.86 -1.50 -1.99 16 20 C -0.05 -0.68 9.35 -39.61 -0.37 -1.05 16 21 C 0.03 0.48 6.90 -79.53 -0.55 -0.07 16 22 N -0.02 -0.49 4.98 34.17 0.17 -0.32 16 23 O -0.23 -4.55 19.17 -31.56 -0.61 -5.15 16 24 O -0.10 -2.43 15.81 -39.67 -0.63 -3.06 16 25 H 0.14 2.50 6.64 -51.93 -0.34 2.16 16 26 H 0.08 1.21 6.75 -51.93 -0.35 0.86 16 27 H 0.29 5.97 8.26 -40.82 -0.34 5.64 16 28 H 0.15 2.48 6.07 -52.48 -0.32 2.16 16 29 H 0.15 1.39 8.06 -52.49 -0.42 0.97 16 30 H 0.16 1.98 7.59 -52.48 -0.40 1.59 16 LS Contribution 294.67 15.07 4.44 4.44 Total: -1.00 -27.81 294.67 -6.68 -34.48 By element: Atomic # 1 Polarization: 3.54 SS G_CDS: -1.35 Total: 2.18 kcal Atomic # 6 Polarization: 9.20 SS G_CDS: -2.84 Total: 6.36 kcal Atomic # 7 Polarization: -36.67 SS G_CDS: 1.12 Total: -35.55 kcal Atomic # 8 Polarization: -21.03 SS G_CDS: -1.50 Total: -22.53 kcal Atomic # 14 Polarization: 17.63 SS G_CDS: -5.04 Total: 12.59 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.50 Total: -1.99 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -27.81 -6.68 -34.48 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000000288697.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.169 kcal (2) G-P(sol) polarization free energy of solvation -27.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.676 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.482 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds