Wall clock time and date at job start Tue Mar 31 2020 03:56:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 N 1.46902 * 109.47133 * 2 1 4 4 C 1.46898 * 111.00225 * 291.25428 * 3 2 1 5 5 C 1.50698 * 109.47167 * 160.22832 * 4 3 2 6 6 H 1.07998 * 120.00051 * 4.66025 * 5 4 3 7 7 C 1.37880 * 119.99897 * 184.65979 * 5 4 3 8 8 N 1.31523 * 120.00103 * 359.97438 * 7 5 4 9 9 Si 1.86799 * 119.99927 * 180.02562 * 7 5 4 10 10 H 1.48496 * 109.47287 * 59.99804 * 9 7 5 11 11 H 1.48508 * 109.46908 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.46966 * 299.99410 * 9 7 5 13 13 C 1.46899 * 111.00125 * 167.30083 * 3 2 1 14 14 C 1.50704 * 109.47190 * 293.95624 * 13 3 2 15 15 N 1.31068 * 126.65702 * 270.04014 * 14 13 3 16 16 N 1.28848 * 107.99071 * 179.97438 * 15 14 13 17 17 N 1.28741 * 109.39385 * 359.73186 * 16 15 14 18 18 N 1.29021 * 108.80830 * 0.44311 * 17 16 15 19 19 C 1.46499 * 126.43678 * 179.83495 * 18 17 16 20 20 C 1.53002 * 109.46803 * 269.68366 * 19 18 17 21 21 C 1.53180 * 109.54547 * 65.17579 * 20 19 18 22 22 C 1.53284 * 109.06626 * 176.84805 * 21 20 19 23 23 O 1.42899 * 109.46128 * 302.45108 * 22 21 20 24 24 C 1.42900 * 114.09926 * 61.15622 * 23 22 21 25 25 C 1.53091 * 109.41528 * 298.83920 * 24 23 22 26 26 H 1.09008 * 109.46920 * 299.32918 * 1 2 3 27 27 H 1.09000 * 109.47098 * 59.32437 * 1 2 3 28 28 H 1.09000 * 109.47022 * 179.33156 * 1 2 3 29 29 H 1.09000 * 109.47399 * 240.00351 * 2 1 3 30 30 H 1.08999 * 109.47419 * 119.99951 * 2 1 3 31 31 H 1.08996 * 109.47092 * 280.23129 * 4 3 2 32 32 H 1.09001 * 109.46696 * 40.23039 * 4 3 2 33 33 H 0.96991 * 119.99798 * 180.02562 * 8 7 5 34 34 H 1.09000 * 109.47367 * 173.95193 * 13 3 2 35 35 H 1.09004 * 109.47219 * 53.95451 * 13 3 2 36 36 H 1.08993 * 109.47257 * 149.68584 * 19 18 17 37 37 H 1.09003 * 109.47399 * 29.68076 * 19 18 17 38 38 H 1.09000 * 109.54293 * 304.99875 * 20 19 18 39 39 H 1.08994 * 109.52320 * 296.84507 * 21 20 19 40 40 H 1.09007 * 109.51854 * 57.02961 * 21 20 19 41 41 H 1.08999 * 109.45651 * 182.44616 * 22 21 20 42 42 H 1.09000 * 109.45907 * 62.45232 * 22 21 20 43 43 H 1.09000 * 109.47895 * 178.85829 * 24 23 22 44 44 H 1.08996 * 109.49364 * 58.83219 * 24 23 22 45 45 H 1.09000 * 109.52459 * 297.70246 * 25 24 23 46 46 H 1.09000 * 109.57383 * 177.54971 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0196 1.3850 0.0000 4 6 1.7264 2.0471 -1.2781 5 6 1.7837 3.5417 -1.0943 6 1 2.0881 3.9579 -0.1454 7 6 1.4475 4.3780 -2.1378 8 7 1.0773 3.8712 -3.2936 9 14 1.5192 6.2307 -1.9102 10 1 2.9050 6.6332 -1.5601 11 1 1.1135 6.9004 -3.1721 12 1 0.5964 6.6313 -0.8179 13 6 3.4565 1.4354 0.3015 14 6 3.6894 0.9728 1.7167 15 7 3.7034 1.7215 2.7924 16 7 3.9334 0.9588 3.8051 17 7 4.0609 -0.2578 3.4039 18 7 3.9228 -0.2895 2.1214 19 6 3.9993 -1.4771 1.2671 20 6 5.4437 -1.6810 0.8055 21 6 6.3281 -1.9999 2.0149 22 6 7.7555 -2.2795 1.5315 23 8 7.7378 -3.3562 0.5921 24 6 6.9636 -3.0950 -0.5802 25 6 5.5056 -2.8495 -0.1830 26 1 -0.3633 0.5034 0.8960 27 1 -0.3633 0.5243 -0.8839 28 1 -0.3633 -1.0276 -0.0120 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 2.4633 1.7439 -2.0218 32 1 0.7304 1.7604 -1.6156 33 1 0.8412 4.4595 -4.0277 34 1 3.8155 2.4585 0.1899 35 1 3.9952 0.7842 -0.3869 36 1 3.3558 -1.3415 0.3979 37 1 3.6708 -2.3511 1.8296 38 1 5.8029 -0.7735 0.3202 39 1 6.3321 -1.1500 2.6973 40 1 5.9391 -2.8790 2.5288 41 1 8.3807 -2.5497 2.3825 42 1 8.1585 -1.3866 1.0534 43 1 7.0182 -3.9529 -1.2505 44 1 7.3559 -2.2130 -1.0862 45 1 5.1001 -3.7458 0.2865 46 1 4.9211 -2.6072 -1.0706 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000444647921.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 03:56:52 Heat of formation + Delta-G solvation = 70.648597 kcal Electronic energy + Delta-G solvation = -26893.710163 eV Core-core repulsion = 23242.209587 eV Total energy + Delta-G solvation = -3651.500576 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 309.191 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -43.98134 -39.83328 -37.60909 -36.34284 -33.71722 -32.93985 -32.45570 -31.48587 -30.41545 -28.57951 -27.65236 -25.43671 -24.33197 -24.02041 -22.92358 -22.83052 -21.69950 -20.58692 -19.93745 -17.50690 -17.23338 -16.55538 -16.34128 -16.22362 -15.69912 -15.18380 -15.10826 -14.85690 -14.26252 -14.08809 -14.06578 -13.68235 -13.52186 -13.33115 -12.83780 -12.57915 -12.29260 -12.04830 -11.94091 -11.74644 -11.66552 -11.47937 -11.40867 -11.21792 -11.03190 -10.93479 -10.88312 -10.79855 -10.71431 -10.58083 -10.43908 -10.02253 -9.91837 -9.69522 -9.35387 -8.49854 -7.60843 -6.10968 -4.12589 1.41536 2.05423 2.52702 3.32585 3.36089 3.41101 3.51465 3.98034 4.09453 4.17381 4.32015 4.37752 4.45724 4.57642 4.68026 4.75723 4.81597 4.92185 4.96783 5.11997 5.19730 5.24737 5.29456 5.30779 5.32740 5.41058 5.47044 5.59473 5.61133 5.68592 5.72272 5.77205 5.82657 5.96738 5.99775 6.07882 6.31379 6.37816 6.61137 6.82103 6.93285 7.06932 7.66657 7.82531 7.97681 8.33787 8.87846 8.95520 9.52798 10.99333 Molecular weight = 309.19amu Principal moments of inertia in cm(-1) A = 0.014984 B = 0.003783 C = 0.003588 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1868.246602 B = 7400.143060 C = 7801.440134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.041 3.959 3 N -0.525 5.525 4 C 0.194 3.806 5 C -0.511 4.511 6 H 0.067 0.933 7 C 0.059 3.941 8 N -0.900 5.900 9 Si 0.898 3.102 10 H -0.276 1.276 11 H -0.288 1.288 12 H -0.275 1.275 13 C 0.139 3.861 14 C 0.212 3.788 15 N -0.289 5.289 16 N -0.084 5.084 17 N -0.107 5.107 18 N -0.310 5.310 19 C 0.109 3.891 20 C -0.107 4.107 21 C -0.151 4.151 22 C 0.062 3.938 23 O -0.382 6.382 24 C 0.062 3.938 25 C -0.148 4.148 26 H 0.059 0.941 27 H 0.068 0.932 28 H 0.048 0.952 29 H 0.028 0.972 30 H 0.050 0.950 31 H -0.006 1.006 32 H 0.045 0.955 33 H 0.263 0.737 34 H 0.125 0.875 35 H 0.048 0.952 36 H 0.117 0.883 37 H 0.111 0.889 38 H 0.084 0.916 39 H 0.076 0.924 40 H 0.078 0.922 41 H 0.096 0.904 42 H 0.051 0.949 43 H 0.098 0.902 44 H 0.053 0.947 45 H 0.079 0.921 46 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.364 -16.168 3.891 19.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.088 4.088 3 N -0.251 5.251 4 C 0.070 3.930 5 C -0.550 4.550 6 H 0.085 0.915 7 C -0.143 4.143 8 N -0.539 5.539 9 Si 0.726 3.274 10 H -0.201 1.201 11 H -0.214 1.214 12 H -0.200 1.200 13 C 0.008 3.992 14 C -0.066 4.066 15 N -0.138 5.138 16 N -0.078 5.078 17 N -0.092 5.092 18 N -0.112 5.112 19 C -0.012 4.012 20 C -0.127 4.127 21 C -0.189 4.189 22 C -0.014 4.014 23 O -0.301 6.301 24 C -0.015 4.015 25 C -0.186 4.186 26 H 0.078 0.922 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.046 0.954 30 H 0.068 0.932 31 H 0.012 0.988 32 H 0.063 0.937 33 H 0.072 0.928 34 H 0.143 0.857 35 H 0.066 0.934 36 H 0.134 0.866 37 H 0.129 0.871 38 H 0.102 0.898 39 H 0.095 0.905 40 H 0.097 0.903 41 H 0.114 0.886 42 H 0.069 0.931 43 H 0.116 0.884 44 H 0.072 0.928 45 H 0.098 0.902 46 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 9.265 -15.788 5.516 19.119 hybrid contribution 0.027 0.548 -1.523 1.619 sum 9.293 -15.240 3.993 18.291 Atomic orbital electron populations 1.21753 0.94551 1.00371 1.03549 1.22287 0.97286 0.90932 0.98245 1.62171 1.10739 1.13595 1.38614 1.19863 0.96910 0.94267 0.81985 1.21138 1.45273 0.90219 0.98326 0.91503 1.24953 0.95126 0.99151 0.95064 1.69932 1.45848 1.35424 1.02690 0.86549 0.78719 0.84854 0.77292 1.20133 1.21423 1.20040 1.20575 0.92115 1.03628 0.82892 1.26419 0.99044 0.80812 1.00350 1.75088 1.17830 1.25863 0.95012 1.78592 1.14433 0.93633 1.21094 1.78759 1.19476 1.18502 0.92467 1.48524 1.46835 1.09644 1.06173 1.22501 0.99265 0.85042 0.94422 1.21626 0.93511 1.00234 0.97299 1.22303 0.96030 1.03241 0.97302 1.22599 0.95903 0.90274 0.92671 1.87943 1.70870 1.40595 1.30691 1.22563 0.89527 1.01916 0.87506 1.22186 0.98789 0.98112 0.99516 0.92185 0.91293 0.93329 0.95371 0.93197 0.98849 0.93682 0.92788 0.85742 0.93440 0.86559 0.87085 0.89757 0.90531 0.90282 0.88564 0.93087 0.88365 0.92837 0.90213 0.89870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.26 9.94 37.16 0.37 -1.89 16 2 C 0.04 0.64 4.25 -3.83 -0.02 0.62 16 3 N -0.52 -10.14 4.39 -237.52 -1.04 -11.18 16 4 C 0.19 4.51 4.61 -4.98 -0.02 4.49 16 5 C -0.51 -13.49 8.61 -34.44 -0.30 -13.78 16 6 H 0.07 1.79 7.66 -52.49 -0.40 1.39 16 7 C 0.06 1.58 5.46 -17.81 -0.10 1.49 16 8 N -0.90 -25.25 13.29 55.43 0.74 -24.51 16 9 Si 0.90 21.09 29.54 -169.99 -5.02 16.07 16 10 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 11 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 12 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 13 C 0.14 2.38 5.02 -4.97 -0.02 2.35 16 14 C 0.21 3.54 6.80 -155.43 -1.06 2.48 16 15 N -0.29 -5.61 12.36 32.70 0.40 -5.20 16 16 N -0.08 -1.55 13.43 60.35 0.81 -0.74 16 17 N -0.11 -1.69 12.41 60.35 0.75 -0.94 16 18 N -0.31 -4.28 2.63 -58.27 -0.15 -4.44 16 19 C 0.11 1.05 4.59 -4.04 -0.02 1.03 16 20 C -0.11 -0.90 2.48 -90.43 -0.22 -1.13 16 21 C -0.15 -1.35 5.21 -26.49 -0.14 -1.49 16 22 C 0.06 0.53 6.85 37.30 0.26 0.79 16 23 O -0.38 -3.63 10.77 -35.23 -0.38 -4.01 16 24 C 0.06 0.45 6.84 37.20 0.25 0.70 16 25 C -0.15 -0.98 5.42 -26.59 -0.14 -1.13 16 26 H 0.06 1.00 8.14 -51.92 -0.42 0.58 16 27 H 0.07 1.20 6.35 -51.93 -0.33 0.87 16 28 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 29 H 0.03 0.40 7.81 -51.93 -0.41 0.00 16 30 H 0.05 0.71 4.63 -51.93 -0.24 0.47 16 31 H -0.01 -0.15 8.00 -51.93 -0.42 -0.57 16 32 H 0.05 1.13 6.03 -51.93 -0.31 0.81 16 33 H 0.26 7.05 8.31 -40.82 -0.34 6.71 16 34 H 0.12 2.35 7.33 -51.93 -0.38 1.97 16 35 H 0.05 0.68 7.79 -51.93 -0.40 0.28 16 36 H 0.12 1.07 4.90 -51.93 -0.25 0.81 16 37 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 38 H 0.08 0.79 8.14 -51.93 -0.42 0.36 16 39 H 0.08 0.83 7.17 -51.93 -0.37 0.46 16 40 H 0.08 0.69 8.14 -51.93 -0.42 0.27 16 41 H 0.10 0.72 8.14 -51.93 -0.42 0.30 16 42 H 0.05 0.43 8.14 -51.93 -0.42 0.00 16 43 H 0.10 0.57 8.14 -51.93 -0.42 0.15 16 44 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 45 H 0.08 0.49 8.14 -51.93 -0.42 0.07 16 46 H 0.08 0.48 8.14 -51.93 -0.42 0.05 16 LS Contribution 361.74 15.07 5.45 5.45 Total: -1.00 -30.84 361.74 -6.91 -37.75 By element: Atomic # 1 Polarization: 4.53 SS G_CDS: -7.30 Total: -2.77 kcal Atomic # 6 Polarization: -4.32 SS G_CDS: -1.16 Total: -5.48 kcal Atomic # 7 Polarization: -48.51 SS G_CDS: 1.50 Total: -47.01 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.38 Total: -4.01 kcal Atomic # 14 Polarization: 21.09 SS G_CDS: -5.02 Total: 16.07 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -30.84 -6.91 -37.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000444647921.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.395 kcal (2) G-P(sol) polarization free energy of solvation -30.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.746 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds