Wall clock time and date at job start Tue Mar 31 2020 04:02:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46500 * 109.46937 * 317.59140 * 3 2 1 5 5 C 1.37172 * 119.99826 * 263.78274 * 4 3 2 6 6 H 1.08000 * 119.99626 * 201.65888 * 5 4 3 7 7 C 1.38880 * 119.99921 * 21.66177 * 5 4 3 8 8 N 1.31469 * 120.00283 * 10.86273 * 7 5 4 9 9 Si 1.86800 * 119.99793 * 190.86345 * 7 5 4 10 10 H 1.48501 * 109.47048 * 0.02562 * 9 7 5 11 11 H 1.48502 * 109.47007 * 120.00085 * 9 7 5 12 12 H 1.48499 * 109.47258 * 240.00012 * 9 7 5 13 13 C 1.34774 * 119.99997 * 83.78771 * 4 3 2 14 14 O 1.21593 * 119.99932 * 179.97438 * 13 4 3 15 15 N 1.34775 * 119.99923 * 359.97438 * 13 4 3 16 16 C 1.39960 * 119.99882 * 184.61365 * 15 13 4 17 17 C 1.38896 * 120.04801 * 323.60102 * 16 15 13 18 18 C 1.38104 * 119.96041 * 180.02562 * 17 16 15 19 19 C 1.38370 * 120.07356 * 359.97438 * 18 17 16 20 20 Cl 1.73604 * 119.94755 * 180.27945 * 19 18 17 21 21 C 1.38483 * 120.10815 * 0.02562 * 19 18 17 22 22 Cl 1.73601 * 119.98610 * 180.02562 * 21 19 18 23 23 C 1.38236 * 120.02852 * 359.97438 * 21 19 18 24 24 H 1.09003 * 109.46726 * 197.59210 * 3 2 1 25 25 H 1.08997 * 109.47175 * 77.59384 * 3 2 1 26 26 H 0.97002 * 120.00305 * 179.97438 * 8 7 5 27 27 H 0.96998 * 120.00442 * 4.60814 * 15 13 4 28 28 H 1.07993 * 120.01808 * 0.04440 * 17 16 15 29 29 H 1.08003 * 119.95833 * 180.02562 * 18 17 16 30 30 H 1.08003 * 120.03520 * 179.97438 * 23 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0968 -1.0190 0.9315 5 6 3.4465 -0.6681 2.2107 6 1 4.1146 -1.2976 2.7797 7 6 2.9414 0.4965 2.7740 8 7 1.9703 1.1492 2.1745 9 14 3.6418 1.1356 4.3834 10 1 4.7189 0.2261 4.8503 11 1 4.1992 2.4962 4.1751 12 1 2.5647 1.1928 5.4040 13 6 3.2029 -2.3016 0.5317 14 8 3.6090 -3.1478 1.3047 15 7 2.8588 -2.6464 -0.7250 16 6 2.8767 -3.9915 -1.1114 17 6 3.8580 -4.8431 -0.6205 18 6 3.8743 -6.1699 -1.0034 19 6 2.9138 -6.6519 -1.8750 20 17 2.9330 -8.3220 -2.3485 21 6 1.9341 -5.8054 -2.3663 22 17 0.7301 -6.4136 -3.4591 23 6 1.9137 -4.4765 -1.9859 24 1 2.9709 0.9805 0.3106 25 1 2.9715 -0.2200 -1.0036 26 1 1.6172 1.9625 2.5681 27 1 2.5988 -1.9624 -1.3617 28 1 4.6077 -4.4680 0.0604 29 1 4.6371 -6.8322 -0.6213 30 1 1.1499 -3.8161 -2.3693 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000016385368.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:02:16 Heat of formation + Delta-G solvation = 33.750724 kcal Electronic energy + Delta-G solvation = -20559.847950 eV Core-core repulsion = 17022.084511 eV Total energy + Delta-G solvation = -3537.763439 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 313.013 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -40.32952 -38.76234 -36.70319 -36.49655 -35.94764 -34.61338 -34.06912 -31.90028 -30.85509 -29.06494 -27.65043 -25.02204 -23.06046 -22.49661 -20.12276 -18.40064 -18.09277 -17.30766 -16.56241 -16.28518 -15.67062 -15.00353 -14.68156 -14.22304 -14.01560 -13.89208 -13.72170 -13.42742 -13.10983 -12.44605 -12.19714 -11.92780 -11.87786 -11.77544 -11.50980 -11.35004 -11.26288 -11.03858 -10.87900 -10.71544 -10.54346 -10.42613 -9.84608 -9.42623 -9.23323 -8.83924 -8.23899 -7.89723 -6.56810 -4.15715 1.06612 1.15915 1.85900 2.21776 3.05532 3.07766 3.19584 3.29621 3.44749 3.74848 3.81587 4.00393 4.10164 4.66990 4.82129 4.88187 5.10302 5.19121 5.20764 5.40322 5.63590 5.78429 5.87513 6.14533 6.29297 6.44147 6.48906 7.01527 7.10924 7.36991 8.02365 8.25140 8.62663 8.84046 9.08238 9.58499 10.49617 Molecular weight = 313.01amu Principal moments of inertia in cm(-1) A = 0.024288 B = 0.003538 C = 0.003172 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1152.533364 B = 7912.636563 C = 8825.150296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.469 5.469 2 C 0.242 3.758 3 C 0.223 3.777 4 N -0.454 5.454 5 C -0.296 4.296 6 H 0.110 0.890 7 C 0.028 3.972 8 N -0.892 5.892 9 Si 0.937 3.063 10 H -0.267 1.267 11 H -0.279 1.279 12 H -0.282 1.282 13 C 0.659 3.341 14 O -0.588 6.588 15 N -0.695 5.695 16 C 0.209 3.791 17 C -0.106 4.106 18 C -0.079 4.079 19 C -0.061 4.061 20 Cl -0.065 7.065 21 C -0.008 4.008 22 Cl -0.057 7.057 23 C -0.142 4.142 24 H 0.140 0.860 25 H 0.074 0.926 26 H 0.273 0.727 27 H 0.402 0.598 28 H 0.159 0.841 29 H 0.142 0.858 30 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.323 -8.242 -10.584 14.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.149 5.149 2 C -0.077 4.077 3 C 0.095 3.905 4 N -0.177 5.177 5 C -0.423 4.423 6 H 0.127 0.873 7 C -0.174 4.174 8 N -0.531 5.531 9 Si 0.764 3.236 10 H -0.191 1.191 11 H -0.205 1.205 12 H -0.208 1.208 13 C 0.363 3.637 14 O -0.468 6.468 15 N -0.343 5.343 16 C 0.110 3.890 17 C -0.127 4.127 18 C -0.099 4.099 19 C -0.089 4.089 20 Cl -0.036 7.036 21 C -0.036 4.036 22 Cl -0.028 7.028 23 C -0.164 4.164 24 H 0.158 0.842 25 H 0.092 0.908 26 H 0.084 0.916 27 H 0.239 0.761 28 H 0.176 0.824 29 H 0.160 0.840 30 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 2.741 -8.724 -10.005 13.555 hybrid contribution 0.129 0.718 0.440 0.852 sum 2.870 -8.007 -9.565 12.800 Atomic orbital electron populations 1.80921 1.13575 1.09395 1.11003 1.29331 0.95394 0.92128 0.90822 1.18753 0.81641 0.98014 0.92089 1.42872 1.60218 1.02222 1.12437 1.19713 1.26199 1.07444 0.88994 0.87257 1.25330 0.95038 0.97392 0.99629 1.69737 1.24149 1.18844 1.40417 0.85675 0.78789 0.78556 0.80621 1.19117 1.20500 1.20818 1.16050 0.83045 0.83736 0.80846 1.90785 1.54449 1.48402 1.53122 1.42960 1.72263 1.05570 1.13488 1.17421 0.92575 0.84769 0.94220 1.21511 0.98588 0.92351 1.00209 1.20917 0.97505 0.95819 0.95643 1.20614 0.99234 0.85961 1.03135 1.98355 1.98254 1.15754 1.91212 1.20315 0.92818 0.93161 0.97322 1.98371 1.54881 1.87747 1.61845 1.20697 0.99491 0.93572 1.02684 0.84239 0.90839 0.91584 0.76125 0.82398 0.84031 0.84085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.64 18.54 42.15 0.78 -9.86 16 2 C 0.24 5.00 13.47 -20.76 -0.28 4.72 16 3 C 0.22 4.02 4.81 -6.83 -0.03 3.99 16 4 N -0.45 -9.76 2.60 -123.32 -0.32 -10.08 16 5 C -0.30 -7.11 9.31 -14.92 -0.14 -7.25 16 6 H 0.11 2.75 7.39 -52.49 -0.39 2.37 16 7 C 0.03 0.66 5.10 -17.47 -0.09 0.57 16 8 N -0.89 -21.31 9.06 55.49 0.50 -20.81 16 9 Si 0.94 18.95 29.57 -169.99 -5.03 13.92 16 10 H -0.27 -5.38 7.11 56.52 0.40 -4.98 16 11 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 12 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 13 C 0.66 13.76 8.00 -86.92 -0.70 13.06 16 14 O -0.59 -13.99 13.54 5.28 0.07 -13.92 16 15 N -0.69 -11.37 5.21 -14.22 -0.07 -11.45 16 16 C 0.21 3.23 6.28 -83.68 -0.53 2.70 16 17 C -0.11 -1.60 8.69 -39.39 -0.34 -1.94 16 18 C -0.08 -1.04 9.82 -39.58 -0.39 -1.42 16 19 C -0.06 -0.80 6.32 -39.44 -0.25 -1.05 16 20 Cl -0.06 -0.77 27.95 -51.86 -1.45 -2.22 16 21 C -0.01 -0.11 6.32 -39.49 -0.25 -0.36 16 22 Cl -0.06 -0.71 27.95 -51.86 -1.45 -2.16 16 23 C -0.14 -1.96 9.75 -39.36 -0.38 -2.35 16 24 H 0.14 2.62 6.39 -51.93 -0.33 2.29 16 25 H 0.07 0.96 6.64 -51.93 -0.34 0.61 16 26 H 0.27 6.41 8.31 -40.82 -0.34 6.07 16 27 H 0.40 5.48 6.58 -40.82 -0.27 5.21 16 28 H 0.16 2.63 6.32 -52.49 -0.33 2.29 16 29 H 0.14 1.53 8.06 -52.48 -0.42 1.11 16 30 H 0.14 1.75 8.06 -52.48 -0.42 1.33 16 LS Contribution 301.35 15.07 4.54 4.54 Total: -1.00 -28.26 301.35 -7.44 -35.70 By element: Atomic # 1 Polarization: 7.31 SS G_CDS: -1.64 Total: 5.67 kcal Atomic # 6 Polarization: 14.04 SS G_CDS: -3.37 Total: 10.67 kcal Atomic # 7 Polarization: -53.09 SS G_CDS: 0.89 Total: -52.20 kcal Atomic # 8 Polarization: -13.99 SS G_CDS: 0.07 Total: -13.92 kcal Atomic # 14 Polarization: 18.95 SS G_CDS: -5.03 Total: 13.92 kcal Atomic # 17 Polarization: -1.48 SS G_CDS: -2.90 Total: -4.38 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -28.26 -7.44 -35.70 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000016385368.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.452 kcal (2) G-P(sol) polarization free energy of solvation -28.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.193 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.702 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds