Wall clock time and date at job start Tue Mar 31 2020 04:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37098 * 119.99959 * 2 1 4 4 H 1.07998 * 120.00057 * 205.14461 * 3 2 1 5 5 C 1.38948 * 119.99891 * 25.15050 * 3 2 1 6 6 N 1.31410 * 120.00127 * 11.74466 * 5 3 2 7 7 Si 1.86803 * 119.99843 * 191.74457 * 5 3 2 8 8 H 1.48503 * 109.46897 * 60.00060 * 7 5 3 9 9 H 1.48502 * 109.47211 * 179.97438 * 7 5 3 10 10 H 1.48494 * 109.47286 * 300.00019 * 7 5 3 11 11 C 1.34776 * 119.99815 * 179.97438 * 2 1 3 12 12 O 1.21298 * 119.99692 * 180.02562 * 11 2 1 13 13 C 1.50696 * 120.00390 * 0.02562 * 11 2 1 14 14 H 1.09000 * 115.54809 * 34.32905 * 13 11 2 15 15 C 1.52997 * 117.52057 * 248.62923 * 13 11 2 16 16 C 1.53003 * 117.50207 * 179.97438 * 13 11 2 17 17 H 1.09001 * 117.49371 * 0.02562 * 16 13 11 18 18 C 1.50700 * 117.50053 * 215.00431 * 16 13 11 19 19 C 1.38247 * 119.99330 * 300.00251 * 18 16 13 20 20 C 1.38198 * 120.02675 * 179.97438 * 19 18 16 21 21 C 1.38381 * 120.01015 * 359.97438 * 20 19 18 22 22 Cl 1.73604 * 120.00185 * 179.97438 * 21 20 19 23 23 C 1.38305 * 119.99161 * 0.02562 * 21 20 19 24 24 C 1.38332 * 119.99290 * 119.72374 * 18 16 13 25 25 Cl 1.73599 * 120.00941 * 0.02562 * 24 18 16 26 26 H 1.09004 * 109.47245 * 265.05511 * 1 2 3 27 27 H 1.08995 * 109.47392 * 25.05671 * 1 2 3 28 28 H 1.08999 * 109.46975 * 145.05731 * 1 2 3 29 29 H 0.97002 * 120.00062 * 180.02562 * 6 5 3 30 30 H 1.09000 * 117.49837 * 145.02877 * 15 13 11 31 31 H 1.08998 * 117.49855 * 0.02562 * 15 13 11 32 32 H 1.08006 * 119.98405 * 359.97438 * 19 18 16 33 33 H 1.08004 * 119.99231 * 179.97438 * 20 19 18 34 34 H 1.07993 * 120.01478 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1505 1.1873 0.0000 4 1 3.1537 1.2316 -0.3974 5 6 1.5545 2.3336 0.5114 6 7 0.4388 2.2429 1.1997 7 14 2.3394 4.0036 0.2205 8 1 2.4233 4.2635 -1.2392 9 1 1.5141 5.0573 0.8638 10 1 3.7044 4.0176 0.8051 11 6 2.1389 -1.1672 0.0005 12 8 3.3519 -1.1672 0.0010 13 6 1.3854 -2.4723 0.0005 14 1 0.4473 -2.4735 -0.5544 15 6 1.4597 -3.3315 1.2643 16 6 2.2075 -3.7627 0.0005 17 1 3.2934 -3.6676 0.0010 18 6 1.6580 -4.9379 -0.7663 19 6 0.4280 -5.4702 -0.4272 20 6 -0.0769 -6.5476 -1.1302 21 6 0.6484 -7.0938 -2.1745 22 17 0.0143 -8.4476 -3.0571 23 6 1.8790 -6.5617 -2.5142 24 6 2.3818 -5.4802 -1.8130 25 17 3.9233 -4.8075 -2.2430 26 1 -0.3634 -0.0886 1.0239 27 1 -0.3634 0.9309 -0.4352 28 1 -0.3633 -0.8424 -0.5886 29 1 0.0225 3.0431 1.5564 30 1 0.5704 -3.8979 1.5407 31 1 2.0533 -2.9526 2.0963 32 1 -0.1386 -5.0439 0.3875 33 1 -1.0377 -6.9632 -0.8646 34 1 2.4452 -6.9875 -3.3294 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000089335287.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:05:27 Heat of formation + Delta-G solvation = 9.658309 kcal Electronic energy + Delta-G solvation = -20671.756045 eV Core-core repulsion = 17236.488224 eV Total energy + Delta-G solvation = -3435.267821 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 313.038 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.08544 -38.64072 -36.98140 -36.45982 -35.86323 -34.48168 -31.61054 -31.09016 -30.50970 -26.50993 -25.07941 -24.09725 -23.13332 -22.50657 -20.54681 -18.57346 -17.76737 -16.90425 -16.52528 -15.89300 -15.38841 -14.80980 -14.59981 -14.24007 -14.16673 -14.00545 -13.78665 -13.15609 -12.56961 -12.49313 -12.20683 -11.87470 -11.68660 -11.50788 -11.34240 -11.30975 -11.24637 -11.13921 -10.86351 -10.71745 -10.44497 -10.39119 -10.24500 -10.02028 -9.12333 -9.00811 -8.60378 -8.36401 -7.65590 -6.33406 -3.89946 0.78116 0.89853 1.69559 2.21082 3.13048 3.20714 3.23884 3.28089 3.65829 4.09673 4.30373 4.45788 4.53178 4.71448 4.92036 4.98132 5.08237 5.13291 5.28984 5.35289 5.42300 5.57345 5.75531 5.79873 5.86777 6.02707 6.10700 6.31705 6.37241 6.40873 6.53655 6.85759 7.19315 7.55328 8.14348 8.48443 9.17973 9.41515 9.99089 10.71427 Molecular weight = 313.04amu Principal moments of inertia in cm(-1) A = 0.024550 B = 0.003153 C = 0.002965 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1140.239875 B = 8877.508871 C = 9439.920063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.113 3.887 2 N -0.440 5.440 3 C -0.306 4.306 4 H 0.097 0.903 5 C 0.031 3.969 6 N -0.882 5.882 7 Si 0.926 3.074 8 H -0.273 1.273 9 H -0.284 1.284 10 H -0.272 1.272 11 C 0.473 3.527 12 O -0.585 6.585 13 C -0.144 4.144 14 H 0.114 0.886 15 C -0.145 4.145 16 C -0.110 4.110 17 H 0.133 0.867 18 C -0.023 4.023 19 C -0.100 4.100 20 C -0.102 4.102 21 C -0.035 4.035 22 Cl -0.067 7.067 23 C -0.101 4.101 24 C -0.021 4.021 25 Cl -0.045 7.045 26 H 0.051 0.949 27 H 0.074 0.926 28 H 0.025 0.975 29 H 0.268 0.732 30 H 0.100 0.900 31 H 0.105 0.895 32 H 0.145 0.855 33 H 0.139 0.861 34 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.063 -17.780 -4.456 18.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.031 4.031 2 N -0.158 5.158 3 C -0.434 4.434 4 H 0.115 0.885 5 C -0.172 4.172 6 N -0.521 5.521 7 Si 0.753 3.247 8 H -0.199 1.199 9 H -0.209 1.209 10 H -0.198 1.198 11 C 0.261 3.739 12 O -0.470 6.470 13 C -0.166 4.166 14 H 0.132 0.868 15 C -0.183 4.183 16 C -0.128 4.128 17 H 0.151 0.849 18 C -0.024 4.024 19 C -0.118 4.118 20 C -0.121 4.121 21 C -0.062 4.062 22 Cl -0.038 7.038 23 C -0.120 4.120 24 C -0.048 4.048 25 Cl -0.016 7.016 26 H 0.070 0.930 27 H 0.093 0.907 28 H 0.043 0.957 29 H 0.078 0.922 30 H 0.118 0.882 31 H 0.123 0.877 32 H 0.162 0.838 33 H 0.157 0.843 34 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -3.536 -17.649 -4.484 18.550 hybrid contribution 0.122 0.815 -0.234 0.856 sum -3.414 -16.834 -4.718 17.813 Atomic orbital electron populations 1.21489 0.81245 0.99883 1.00456 1.43460 1.05467 1.04486 1.62386 1.19608 1.01066 0.84261 1.38507 0.88518 1.25351 0.96612 1.00140 0.95075 1.69977 1.19122 1.29846 1.33144 0.85996 0.79096 0.80905 0.78701 1.19888 1.20927 1.19757 1.19083 0.87382 0.83726 0.83702 1.90519 1.13732 1.86830 1.55928 1.22394 1.00644 0.90991 1.02540 0.86816 1.23048 1.02059 1.01647 0.91536 1.21125 1.00322 0.91606 0.99773 0.84905 1.19262 0.93676 0.95616 0.93892 1.21067 0.94893 0.95681 1.00143 1.21103 1.00235 0.96348 0.94401 1.20691 0.95323 0.93200 0.96989 1.98373 1.86475 1.43776 1.75180 1.20856 0.94907 0.95610 1.00661 1.20630 0.90126 0.96556 0.97514 1.98413 1.26607 1.84396 1.92144 0.93001 0.90730 0.95664 0.92187 0.88218 0.87699 0.83763 0.84338 0.83979 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.50 8.45 59.85 0.51 3.00 16 2 N -0.44 -11.27 3.01 -122.19 -0.37 -11.64 16 3 C -0.31 -8.56 9.23 -14.93 -0.14 -8.70 16 4 H 0.10 2.83 7.46 -52.49 -0.39 2.43 16 5 C 0.03 0.83 5.06 -17.47 -0.09 0.74 16 6 N -0.88 -23.36 10.83 55.50 0.60 -22.76 16 7 Si 0.93 20.73 29.57 -169.99 -5.03 15.71 16 8 H -0.27 -6.03 7.11 56.52 0.40 -5.62 16 9 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 10 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 11 C 0.47 11.48 7.41 -10.99 -0.08 11.40 16 12 O -0.59 -16.17 15.98 5.54 0.09 -16.08 16 13 C -0.14 -2.61 4.93 -91.77 -0.45 -3.06 16 14 H 0.11 1.86 6.51 -51.93 -0.34 1.52 16 15 C -0.15 -2.17 9.57 -26.71 -0.26 -2.43 16 16 C -0.11 -1.75 5.06 -91.75 -0.46 -2.21 16 17 H 0.13 2.41 6.69 -51.93 -0.35 2.06 16 18 C -0.02 -0.31 5.61 -104.58 -0.59 -0.90 16 19 C -0.10 -1.08 9.30 -39.59 -0.37 -1.45 16 20 C -0.10 -0.99 9.83 -39.54 -0.39 -1.38 16 21 C -0.04 -0.37 6.32 -39.50 -0.25 -0.62 16 22 Cl -0.07 -0.62 28.96 -51.86 -1.50 -2.13 16 23 C -0.10 -1.13 9.62 -39.51 -0.38 -1.51 16 24 C -0.02 -0.28 6.31 -39.50 -0.25 -0.53 16 25 Cl -0.04 -0.64 27.42 -51.86 -1.42 -2.06 16 26 H 0.05 1.16 7.85 -51.93 -0.41 0.75 16 27 H 0.07 1.74 6.78 -51.93 -0.35 1.39 16 28 H 0.02 0.46 6.22 -51.93 -0.32 0.14 16 29 H 0.27 6.74 8.31 -40.82 -0.34 6.40 16 30 H 0.10 1.13 6.18 -51.93 -0.32 0.81 16 31 H 0.10 1.69 8.14 -51.93 -0.42 1.27 16 32 H 0.14 1.30 6.02 -52.48 -0.32 0.99 16 33 H 0.14 1.03 8.06 -52.48 -0.42 0.60 16 34 H 0.14 1.37 8.06 -52.49 -0.42 0.95 16 LS Contribution 320.06 15.07 4.82 4.82 Total: -1.00 -30.41 320.06 -9.20 -39.61 By element: Atomic # 1 Polarization: 5.36 SS G_CDS: -3.20 Total: 2.16 kcal Atomic # 6 Polarization: -4.44 SS G_CDS: -3.20 Total: -7.64 kcal Atomic # 7 Polarization: -34.63 SS G_CDS: 0.23 Total: -34.40 kcal Atomic # 8 Polarization: -16.17 SS G_CDS: 0.09 Total: -16.08 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.03 Total: 15.71 kcal Atomic # 17 Polarization: -1.26 SS G_CDS: -2.92 Total: -4.19 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -30.41 -9.20 -39.61 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000089335287.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.273 kcal (2) G-P(sol) polarization free energy of solvation -30.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.615 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds