Wall clock time and date at job start Tue Mar 31 2020 04:18:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35737 * 117.00211 * 2 1 4 4 C 1.39149 * 120.38635 * 359.97374 * 3 2 1 5 5 C 1.38378 * 118.46135 * 179.75713 * 4 3 2 6 6 C 1.39413 * 119.16194 * 0.50480 * 5 4 3 7 7 C 1.47913 * 119.65256 * 179.75638 * 6 5 4 8 8 O 1.21543 * 119.99956 * 359.73025 * 7 6 5 9 9 N 1.34777 * 119.99748 * 179.72726 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72370 * 9 7 6 11 11 C 1.50703 * 109.47138 * 180.28062 * 10 9 7 12 12 O 1.21293 * 120.00086 * 359.97438 * 11 10 9 13 13 N 1.34775 * 120.00069 * 180.02562 * 11 10 9 14 14 C 1.37097 * 120.00084 * 179.97438 * 13 11 10 15 15 H 1.08001 * 120.00027 * 359.97438 * 14 13 11 16 16 C 1.38954 * 119.99944 * 179.97438 * 14 13 11 17 17 N 1.31416 * 119.99793 * 179.97438 * 16 14 13 18 18 Si 1.86800 * 120.00192 * 0.02562 * 16 14 13 19 19 H 1.48498 * 109.47136 * 89.99746 * 18 16 14 20 20 H 1.48501 * 109.46721 * 209.99776 * 18 16 14 21 21 H 1.48504 * 109.46915 * 329.99667 * 18 16 14 22 22 N 1.32858 * 120.69511 * 359.48070 * 6 5 4 23 23 C 1.31458 * 121.67254 * 0.27879 * 22 6 5 24 24 Cl 1.73592 * 119.60814 * 180.02562 * 23 22 6 25 25 H 1.09000 * 109.47282 * 180.02562 * 1 2 3 26 26 H 1.08994 * 109.47177 * 300.00600 * 1 2 3 27 27 H 1.09005 * 109.46553 * 60.00269 * 1 2 3 28 28 H 1.07997 * 120.76450 * 0.03977 * 4 3 2 29 29 H 1.07997 * 120.41723 * 180.28790 * 5 4 3 30 30 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 31 31 H 1.09009 * 109.47454 * 300.27637 * 10 9 7 32 32 H 1.08998 * 109.47492 * 60.27932 * 10 9 7 33 33 H 0.97002 * 120.00050 * 359.97438 * 13 11 10 34 34 H 0.96997 * 120.00181 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0453 1.2094 0.0000 4 6 1.2954 2.3815 -0.0006 5 6 1.9647 3.5926 0.0046 6 6 3.3588 3.5984 -0.0005 7 6 4.0853 4.8868 -0.0006 8 8 3.4669 5.9332 -0.0010 9 7 5.4330 4.9005 0.0000 10 6 6.1525 6.1766 -0.0061 11 6 7.6369 5.9163 -0.0110 12 8 8.0529 4.7770 -0.0091 13 7 8.5022 6.9496 -0.0165 14 6 9.8526 6.7128 -0.0205 15 1 10.2230 5.6983 -0.0188 16 6 10.7447 7.7782 -0.0267 17 7 12.0391 7.5512 -0.0300 18 14 10.1042 9.5329 -0.0290 19 1 9.9397 10.0016 1.3705 20 1 11.0708 10.4117 -0.7350 21 1 8.7928 9.5802 -0.7243 22 7 4.0418 2.4588 0.0000 23 6 3.4369 1.2916 0.0000 24 17 4.3822 -0.1643 0.0015 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8899 27 1 -0.3632 0.5138 -0.8901 28 1 0.2160 2.3467 -0.0003 29 1 1.4141 4.5217 0.0090 30 1 5.9266 4.0655 0.0001 31 1 5.8801 6.7432 -0.8967 32 1 5.8868 6.7479 0.8833 33 1 8.1696 7.8608 -0.0177 34 1 12.6619 8.2948 -0.0340 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000804821547.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:18:37 Heat of formation + Delta-G solvation = -67.831730 kcal Electronic energy + Delta-G solvation = -22353.947648 eV Core-core repulsion = 18506.903193 eV Total energy + Delta-G solvation = -3847.044455 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 313.066 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.28427 -39.73930 -38.63309 -38.03252 -36.78091 -34.61431 -33.82391 -32.66047 -31.78649 -31.27357 -28.53357 -27.66142 -24.80680 -24.01106 -23.61370 -20.78419 -19.67882 -19.01845 -18.69148 -18.06672 -17.60140 -16.56049 -16.14140 -15.64824 -15.55344 -15.27258 -14.93914 -14.82637 -14.57105 -14.26891 -14.04321 -13.75406 -13.33578 -13.02906 -12.46866 -12.20856 -12.15683 -12.12076 -12.04741 -11.78841 -11.44772 -11.22042 -10.62838 -10.60008 -10.21916 -10.04244 -9.92142 -9.67404 -9.03353 -8.75257 -8.74494 -8.27947 -6.38070 -3.90553 0.25031 0.57885 1.53469 2.48364 2.48685 3.00936 3.05080 3.07736 3.14531 3.47041 3.59477 3.88317 4.05527 4.11424 4.31276 4.46698 4.56137 4.58695 4.60163 4.85114 4.94779 5.16107 5.31083 5.43077 5.63881 5.70109 5.76675 5.78763 6.46474 6.49780 7.10548 7.46447 7.70180 8.02167 8.22943 8.47958 8.84623 9.32245 9.66072 10.74158 Molecular weight = 313.07amu Principal moments of inertia in cm(-1) A = 0.026718 B = 0.002712 C = 0.002467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1047.731253 B =10320.523268 C =11347.787014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.294 6.294 3 C 0.116 3.884 4 C -0.164 4.164 5 C -0.065 4.065 6 C 0.063 3.937 7 C 0.574 3.426 8 O -0.542 6.542 9 N -0.684 5.684 10 C 0.104 3.896 11 C 0.437 3.563 12 O -0.572 6.572 13 N -0.577 5.577 14 C -0.309 4.309 15 H 0.122 0.878 16 C 0.044 3.956 17 N -0.875 5.875 18 Si 0.879 3.121 19 H -0.269 1.269 20 H -0.275 1.275 21 H -0.267 1.267 22 N -0.408 5.408 23 C 0.148 3.852 24 Cl -0.008 7.008 25 H 0.108 0.892 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.157 0.843 29 H 0.161 0.839 30 H 0.424 0.576 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.374 0.626 34 H 0.275 0.725 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.107 -10.783 0.079 28.246 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.205 6.205 3 C 0.066 3.934 4 C -0.190 4.190 5 C -0.086 4.086 6 C -0.075 4.075 7 C 0.358 3.642 8 O -0.420 6.420 9 N -0.338 5.338 10 C -0.024 4.024 11 C 0.223 3.777 12 O -0.456 6.456 13 N -0.215 5.215 14 C -0.437 4.437 15 H 0.140 0.860 16 C -0.160 4.160 17 N -0.514 5.514 18 Si 0.705 3.295 19 H -0.194 1.194 20 H -0.200 1.200 21 H -0.192 1.192 22 N -0.122 5.122 23 C -0.021 4.021 24 Cl 0.021 6.979 25 H 0.126 0.874 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.174 0.826 29 H 0.178 0.822 30 H 0.264 0.736 31 H 0.107 0.893 32 H 0.107 0.893 33 H 0.207 0.793 34 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -24.898 -10.980 0.082 27.212 hybrid contribution -1.035 1.025 -0.021 1.457 sum -25.933 -9.955 0.061 27.778 Atomic orbital electron populations 1.23254 0.77295 1.04963 1.01865 1.86170 1.22141 1.24927 1.87256 1.19807 0.91428 0.86173 0.96017 1.21683 1.01339 0.90823 1.05188 1.22033 0.93682 0.99436 0.93415 1.20960 0.91472 0.91116 1.03982 1.17528 0.82315 0.86907 0.77491 1.90786 1.67871 1.31769 1.51545 1.45582 1.05497 1.11162 1.71525 1.21077 0.91595 0.86089 1.03640 1.19600 0.86820 0.86112 0.85172 1.90576 1.78491 1.21357 1.55190 1.42109 1.07105 1.06646 1.65624 1.19452 0.78387 0.97373 1.48532 0.86035 1.25069 0.95126 0.98553 0.97213 1.69620 1.00937 1.32530 1.48278 0.86667 0.79146 0.84550 0.79097 1.19420 1.20019 1.19227 1.67010 1.39932 0.96625 1.08610 1.20892 0.86050 0.89592 1.05597 1.98432 1.72826 1.30159 1.96491 0.87352 0.92009 0.92002 0.82550 0.82152 0.73589 0.89315 0.89294 0.79271 0.91413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 9.83 101.05 0.99 1.07 16 2 O -0.29 -2.40 9.96 -18.92 -0.19 -2.59 16 3 C 0.12 1.13 6.71 -38.81 -0.26 0.87 16 4 C -0.16 -1.28 9.12 -39.19 -0.36 -1.63 16 5 C -0.06 -0.65 9.62 -39.09 -0.38 -1.02 16 6 C 0.06 0.85 6.74 -83.02 -0.56 0.29 16 7 C 0.57 9.08 7.80 -12.30 -0.10 8.99 16 8 O -0.54 -9.26 16.31 5.33 0.09 -9.17 16 9 N -0.68 -11.78 5.52 -62.41 -0.34 -12.13 16 10 C 0.10 1.82 6.15 -5.19 -0.03 1.79 16 11 C 0.44 9.81 7.85 -10.98 -0.09 9.72 16 12 O -0.57 -14.95 15.24 5.55 0.08 -14.87 16 13 N -0.58 -13.54 5.09 -10.96 -0.06 -13.59 16 14 C -0.31 -8.60 10.16 -14.93 -0.15 -8.75 16 15 H 0.12 3.86 7.39 -52.49 -0.39 3.47 16 16 C 0.04 1.20 5.50 -17.46 -0.10 1.10 16 17 N -0.87 -25.18 13.96 55.50 0.77 -24.40 16 18 Si 0.88 19.07 27.74 -169.99 -4.71 14.36 16 19 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 20 H -0.28 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.27 -5.28 6.52 56.52 0.37 -4.91 16 22 N -0.41 -5.82 9.50 -6.83 -0.06 -5.88 16 23 C 0.15 1.85 7.29 -17.28 -0.13 1.73 16 24 Cl -0.01 -0.09 28.66 -51.86 -1.49 -1.58 16 25 H 0.11 0.20 8.14 -51.93 -0.42 -0.22 16 26 H 0.06 0.15 7.69 -51.93 -0.40 -0.25 16 27 H 0.06 0.15 7.69 -51.93 -0.40 -0.25 16 28 H 0.16 0.62 6.43 -52.49 -0.34 0.28 16 29 H 0.16 1.36 7.63 -52.49 -0.40 0.96 16 30 H 0.42 7.78 6.76 -40.82 -0.28 7.50 16 31 H 0.09 1.42 8.14 -51.92 -0.42 1.00 16 32 H 0.09 1.41 8.14 -51.93 -0.42 0.99 16 33 H 0.37 7.68 5.76 -40.82 -0.24 7.45 16 34 H 0.28 7.30 8.31 -40.82 -0.34 6.96 16 LS Contribution 321.57 15.07 4.85 4.85 Total: -1.00 -33.69 321.57 -5.08 -38.77 By element: Atomic # 1 Polarization: 14.96 SS G_CDS: -2.87 Total: 12.09 kcal Atomic # 6 Polarization: 15.30 SS G_CDS: -1.15 Total: 14.15 kcal Atomic # 7 Polarization: -56.32 SS G_CDS: 0.31 Total: -56.01 kcal Atomic # 8 Polarization: -26.61 SS G_CDS: -0.02 Total: -26.63 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -4.71 Total: 14.36 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.49 Total: -1.58 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -33.69 -5.08 -38.77 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000804821547.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.057 kcal (2) G-P(sol) polarization free energy of solvation -33.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.083 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.775 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.832 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds