Wall clock time and date at job start Tue Mar 31 2020 05:03:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.50702 * 115.54843 * 2 1 4 4 O 1.21291 * 120.00134 * 145.67111 * 3 2 1 5 5 N 1.34783 * 119.99911 * 325.66895 * 3 2 1 6 6 C 1.39925 * 119.99769 * 174.76832 * 5 3 2 7 7 C 1.38960 * 120.03483 * 326.30539 * 6 5 3 8 8 C 1.38163 * 120.06282 * 180.02562 * 7 6 5 9 9 C 1.38165 * 120.14078 * 359.75121 * 8 7 6 10 10 C 1.38912 * 120.06765 * 0.50499 * 9 8 7 11 11 O 1.35757 * 120.03002 * 179.76650 * 10 9 8 12 12 C 1.34823 * 116.99637 * 185.63030 * 11 10 9 13 13 H 1.08003 * 120.00543 * 5.40289 * 12 11 10 14 14 C 1.38657 * 119.99909 * 185.40084 * 12 11 10 15 15 N 1.31553 * 119.99957 * 0.02562 * 14 12 11 16 16 Si 1.86795 * 120.00064 * 180.27708 * 14 12 11 17 17 H 1.48501 * 109.47333 * 179.72986 * 16 14 12 18 18 H 1.48504 * 109.47119 * 299.72731 * 16 14 12 19 19 H 1.48502 * 109.47368 * 59.72520 * 16 14 12 20 20 C 1.38709 * 120.03233 * 146.33149 * 6 5 3 21 21 C 1.52998 * 117.51955 * 214.30013 * 2 1 3 22 22 C 1.53001 * 117.50090 * 145.66848 * 2 1 3 23 23 Cl 1.80301 * 117.49769 * 215.00112 * 22 2 1 24 24 Cl 1.80296 * 117.49905 * 0.02562 * 22 2 1 25 25 H 1.08990 * 109.47286 * 34.41595 * 1 2 3 26 26 H 1.08999 * 109.47071 * 154.41889 * 1 2 3 27 27 H 1.09006 * 109.46781 * 274.41367 * 1 2 3 28 28 H 0.96994 * 119.99817 * 354.76916 * 5 3 2 29 29 H 1.07995 * 119.97073 * 0.04900 * 7 6 5 30 30 H 1.08007 * 119.92467 * 179.97438 * 8 7 6 31 31 H 1.08001 * 119.96629 * 180.27296 * 9 8 7 32 32 H 0.96998 * 120.00503 * 180.02562 * 15 14 12 33 33 H 1.07995 * 120.07011 * 359.95653 * 20 6 5 34 34 H 1.08998 * 117.49687 * 0.02562 * 21 2 1 35 35 H 1.08999 * 117.50175 * 145.02673 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1799 1.3597 0.0000 4 8 3.2241 1.5327 0.5924 5 7 1.6009 2.3834 -0.6583 6 6 2.1444 3.6696 -0.5685 7 6 2.7519 4.0873 0.6094 8 6 3.2883 5.3574 0.6990 9 6 3.2271 6.2142 -0.3832 10 6 2.6164 5.8044 -1.5617 11 8 2.5525 6.6486 -2.6229 12 6 1.8459 6.2335 -3.6935 13 1 1.2908 5.3081 -3.6485 14 6 1.8317 6.9946 -4.8524 15 7 2.5082 8.1215 -4.9075 16 14 0.8465 6.4234 -6.3330 17 1 0.9900 7.4099 -7.4337 18 1 1.3519 5.1018 -6.7839 19 1 -0.5856 6.3041 -5.9587 20 6 2.0768 4.5293 -1.6549 21 6 2.2369 -1.1209 -0.7646 22 6 2.2365 -1.1207 0.7654 23 17 3.7829 -0.7135 1.5982 24 17 1.2024 -2.3407 1.5977 25 1 -0.3633 0.8477 -0.5808 26 1 -0.3633 -0.9269 -0.4437 27 1 -0.3633 0.0791 1.0247 28 1 0.8075 2.2284 -1.1943 29 1 2.8052 3.4183 1.4556 30 1 3.7596 5.6798 1.6157 31 1 3.6512 7.2049 -0.3116 32 1 2.4981 8.6542 -5.7180 33 1 1.6054 4.2069 -2.5715 34 1 1.6120 -1.8584 -1.2682 35 1 3.1721 -0.8750 -1.2677 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049297397.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:03:34 Heat of formation + Delta-G solvation = -6.617807 kcal Electronic energy + Delta-G solvation = -22782.931410 eV Core-core repulsion = 19028.275611 eV Total energy + Delta-G solvation = -3754.655799 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 329.037 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -40.71511 -39.01731 -37.78822 -36.47214 -36.15300 -35.68508 -34.35696 -32.27729 -29.82618 -28.99898 -28.39024 -25.40185 -24.23229 -22.78020 -21.87825 -21.28457 -19.61059 -18.01127 -17.96856 -17.21128 -16.00432 -15.66230 -15.28033 -15.13672 -14.76744 -14.19619 -14.17458 -13.86740 -13.61454 -13.58142 -13.11326 -13.00019 -12.86440 -12.53918 -12.38957 -11.85488 -11.78822 -11.59571 -11.39523 -11.27723 -11.08213 -10.91808 -10.82846 -10.59051 -10.50804 -10.25807 -9.80469 -9.60998 -9.33025 -8.84352 -7.79101 -7.20368 -6.48281 -4.08352 0.86984 1.78983 1.88785 2.29137 2.46138 2.91542 3.08794 3.09245 3.13190 3.14998 3.66193 3.88731 3.92502 4.40368 4.47703 4.58899 5.03716 5.06264 5.15491 5.22864 5.24417 5.24830 5.64076 5.68157 5.94393 6.01215 6.18071 6.23102 6.58251 6.89406 6.92803 7.06560 7.26894 7.37558 7.58525 7.75057 7.95244 8.16861 8.96733 9.66934 10.69656 Molecular weight = 329.04amu Principal moments of inertia in cm(-1) A = 0.018250 B = 0.003020 C = 0.002718 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1533.902254 B = 9269.116036 C =10300.765870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.131 4.131 3 C 0.540 3.460 4 O -0.489 6.489 5 N -0.661 5.661 6 C 0.180 3.820 7 C -0.204 4.204 8 C -0.063 4.063 9 C -0.199 4.199 10 C 0.168 3.832 11 O -0.175 6.175 12 C -0.394 4.394 13 H 0.089 0.911 14 C 0.040 3.960 15 N -0.862 5.862 16 Si 0.940 3.060 17 H -0.278 1.278 18 H -0.270 1.270 19 H -0.270 1.270 20 C -0.255 4.255 21 C -0.118 4.118 22 C 0.025 3.975 23 Cl -0.053 7.053 24 Cl -0.091 7.091 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.078 0.922 28 H 0.406 0.594 29 H 0.119 0.881 30 H 0.116 0.884 31 H 0.118 0.882 32 H 0.271 0.729 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.940 -19.185 8.363 21.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.136 4.136 3 C 0.325 3.675 4 O -0.362 6.362 5 N -0.306 5.306 6 C 0.087 3.913 7 C -0.225 4.225 8 C -0.081 4.081 9 C -0.219 4.219 10 C 0.114 3.886 11 O -0.078 6.078 12 C -0.470 4.470 13 H 0.107 0.893 14 C -0.164 4.164 15 N -0.496 5.496 16 Si 0.765 3.235 17 H -0.202 1.202 18 H -0.196 1.196 19 H -0.195 1.195 20 C -0.276 4.276 21 C -0.156 4.156 22 C -0.027 4.027 23 Cl -0.025 7.025 24 Cl -0.064 7.064 25 H 0.095 0.905 26 H 0.096 0.904 27 H 0.097 0.903 28 H 0.242 0.758 29 H 0.137 0.863 30 H 0.134 0.866 31 H 0.136 0.864 32 H 0.081 0.919 33 H 0.148 0.852 34 H 0.149 0.851 35 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.013 -18.739 8.733 21.060 hybrid contribution -0.892 -0.545 -0.937 1.404 sum -4.905 -19.284 7.796 21.371 Atomic orbital electron populations 1.21503 0.88459 1.03786 1.04080 1.22318 0.97589 0.90492 1.03198 1.19155 0.84615 0.84020 0.79756 1.90864 1.20975 1.82873 1.41483 1.43381 1.30766 1.06741 1.49687 1.17360 0.97308 0.82705 0.93893 1.20532 1.07729 0.97184 0.97043 1.20533 0.97603 0.92821 0.97183 1.20265 1.08144 1.01219 0.92229 1.19075 0.92267 0.88432 0.88844 1.84024 1.63583 1.39040 1.21190 1.21215 1.26721 1.08907 0.90137 0.89313 1.25278 0.97509 0.95516 0.98134 1.70020 1.38857 1.12235 1.28508 0.85804 0.79464 0.78554 0.79718 1.20243 1.19562 1.19502 1.20796 1.12654 0.95640 0.98535 1.24101 1.03776 0.97854 0.89819 1.26539 0.88492 0.95446 0.92245 1.98799 1.30208 1.93040 1.80462 1.98743 1.68472 1.57842 1.81324 0.90517 0.90424 0.90304 0.75776 0.86292 0.86592 0.86355 0.91914 0.85247 0.85148 0.85498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.86 8.83 37.16 0.33 -0.53 16 2 C -0.13 -1.28 2.61 -155.66 -0.41 -1.68 16 3 C 0.54 7.39 7.12 -10.98 -0.08 7.31 16 4 O -0.49 -8.27 11.40 5.55 0.06 -8.21 16 5 N -0.66 -9.29 5.18 -9.88 -0.05 -9.34 16 6 C 0.18 3.29 6.27 -83.72 -0.52 2.77 16 7 C -0.20 -3.80 8.66 -39.34 -0.34 -4.14 16 8 C -0.06 -1.16 10.03 -39.64 -0.40 -1.55 16 9 C -0.20 -4.19 9.99 -39.36 -0.39 -4.58 16 10 C 0.17 3.98 6.64 -39.13 -0.26 3.72 16 11 O -0.18 -4.89 9.76 0.05 0.00 -4.89 16 12 C -0.39 -10.67 9.44 30.89 0.29 -10.38 16 13 H 0.09 2.19 5.30 -52.48 -0.28 1.91 16 14 C 0.04 1.08 5.49 -17.52 -0.10 0.98 16 15 N -0.86 -24.85 13.67 55.48 0.76 -24.09 16 16 Si 0.94 19.84 29.55 -169.99 -5.02 14.82 16 17 H -0.28 -5.77 7.11 56.52 0.40 -5.37 16 18 H -0.27 -5.51 7.11 56.52 0.40 -5.11 16 19 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 20 C -0.25 -5.32 9.04 -39.21 -0.35 -5.67 16 21 C -0.12 -0.94 9.56 -26.73 -0.26 -1.20 16 22 C 0.03 0.25 3.60 -26.73 -0.10 0.16 16 23 Cl -0.05 -0.67 26.13 -51.86 -1.35 -2.03 16 24 Cl -0.09 -0.82 28.32 -51.86 -1.47 -2.29 16 25 H 0.08 0.48 6.46 -51.93 -0.34 0.14 16 26 H 0.08 0.42 7.90 -51.93 -0.41 0.00 16 27 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 28 H 0.41 4.44 7.25 -40.82 -0.30 4.15 16 29 H 0.12 2.17 6.43 -52.49 -0.34 1.83 16 30 H 0.12 1.80 8.06 -52.48 -0.42 1.37 16 31 H 0.12 2.39 8.06 -52.49 -0.42 1.97 16 32 H 0.27 7.18 8.31 -40.82 -0.34 6.84 16 33 H 0.13 2.64 5.71 -52.49 -0.30 2.34 16 34 H 0.13 0.68 8.05 -51.93 -0.42 0.27 16 35 H 0.13 1.07 8.14 -51.93 -0.42 0.65 16 LS Contribution 330.45 15.07 4.98 4.98 Total: -1.00 -31.88 330.45 -7.88 -39.76 By element: Atomic # 1 Polarization: 9.28 SS G_CDS: -3.20 Total: 6.08 kcal Atomic # 6 Polarization: -12.21 SS G_CDS: -2.58 Total: -14.79 kcal Atomic # 7 Polarization: -34.14 SS G_CDS: 0.71 Total: -33.43 kcal Atomic # 8 Polarization: -13.16 SS G_CDS: 0.06 Total: -13.10 kcal Atomic # 14 Polarization: 19.84 SS G_CDS: -5.02 Total: 14.82 kcal Atomic # 17 Polarization: -1.49 SS G_CDS: -2.82 Total: -4.31 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -31.88 -7.88 -39.76 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049297397.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.141 kcal (2) G-P(sol) polarization free energy of solvation -31.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.759 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds