Wall clock time and date at job start Tue Mar 31 2020 05:11:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34236 * 116.99452 * 2 1 4 4 O 1.20821 * 120.00166 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99645 * 180.02562 * 3 2 1 6 6 C 1.52996 * 109.46897 * 173.27395 * 5 3 2 7 7 H 1.08996 * 109.47477 * 53.40622 * 6 5 3 8 8 N 1.46506 * 109.47072 * 173.40458 * 6 5 3 9 9 C 1.34776 * 120.00011 * 274.09532 * 8 6 5 10 10 O 1.21699 * 119.99908 * 355.00051 * 9 8 6 11 11 C 1.46370 * 120.00381 * 175.00187 * 9 8 6 12 12 H 1.08001 * 119.99705 * 359.97438 * 11 9 8 13 13 C 1.40046 * 120.00246 * 179.97438 * 11 9 8 14 14 N 1.30665 * 120.00249 * 0.02562 * 13 11 9 15 15 Si 1.86805 * 119.99692 * 180.02562 * 13 11 9 16 16 H 1.48498 * 109.47331 * 60.00370 * 15 13 11 17 17 H 1.48502 * 109.46838 * 179.97438 * 15 13 11 18 18 H 1.48494 * 109.47397 * 299.99873 * 15 13 11 19 19 C 1.50697 * 109.47229 * 293.40097 * 6 5 3 20 20 C 1.38264 * 119.97277 * 100.00502 * 19 6 5 21 21 C 1.38219 * 120.06099 * 179.97438 * 20 19 6 22 22 C 1.38314 * 120.01111 * 0.02562 * 21 20 19 23 23 Cl 1.73604 * 120.02427 * 180.02562 * 22 21 20 24 24 C 1.38545 * 119.95498 * 359.97438 * 22 21 20 25 25 F 1.35104 * 120.03546 * 180.02562 * 24 22 21 26 26 C 1.38194 * 119.97962 * 279.98043 * 19 6 5 27 27 H 1.08995 * 109.47561 * 59.99900 * 1 2 3 28 28 H 1.08998 * 109.46830 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46979 * 299.99688 * 1 2 3 30 30 H 1.08997 * 109.47477 * 53.27204 * 5 3 2 31 31 H 1.09001 * 109.46953 * 293.26896 * 5 3 2 32 32 H 0.97002 * 120.00013 * 94.08887 * 8 6 5 33 33 H 0.97001 * 120.00372 * 180.02562 * 14 13 11 34 34 H 1.08006 * 119.97127 * 0.25420 * 20 19 6 35 35 H 1.07997 * 119.99445 * 179.97438 * 21 20 19 36 36 H 1.08003 * 119.99877 * 359.97438 * 26 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0006 6 6 4.0004 2.7324 -0.1694 7 1 3.5114 3.3471 0.5862 8 7 5.4538 2.8302 -0.0128 9 6 5.9916 2.9656 1.2156 10 8 5.2683 3.0980 2.1853 11 6 7.4456 2.9535 1.3834 12 1 8.0875 2.8355 0.5229 13 6 8.0044 3.0947 2.6598 14 7 7.2278 3.2368 3.7010 15 14 9.8601 3.0799 2.8737 16 1 10.4571 4.1948 2.0954 17 1 10.1940 3.2460 4.3112 18 1 10.4045 1.7877 2.3848 19 6 3.6094 3.2173 -1.5416 20 6 2.4712 3.9852 -1.7045 21 6 2.1111 4.4314 -2.9621 22 6 2.8892 4.1094 -4.0594 23 17 2.4376 4.6702 -5.6391 24 6 4.0298 3.3400 -3.8969 25 9 4.7913 3.0250 -4.9675 26 6 4.3889 2.8946 -2.6361 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 3.9610 0.6805 -0.8245 31 1 3.9507 0.8884 0.9433 32 1 6.0290 2.7975 -0.7931 33 1 7.6149 3.3350 4.5850 34 1 1.8653 4.2404 -0.8475 35 1 1.2216 5.0308 -3.0882 36 1 5.2782 2.2954 -2.5079 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195567597.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:11:22 Heat of formation + Delta-G solvation = -151.260864 kcal Electronic energy + Delta-G solvation = -25581.125398 eV Core-core repulsion = 21391.861031 eV Total energy + Delta-G solvation = -4189.264368 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 329.066 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -48.95860 -40.57233 -39.37101 -37.57327 -36.63688 -36.34173 -34.38247 -32.51785 -30.85126 -30.71329 -29.95689 -27.60232 -26.34084 -24.32520 -23.01241 -21.79978 -20.57609 -19.47511 -18.15006 -17.52632 -17.08643 -16.63678 -16.44152 -16.33220 -16.14891 -15.76794 -15.39929 -14.75301 -14.21489 -14.06208 -13.83795 -13.68745 -13.34568 -13.13412 -12.95808 -12.80235 -12.41904 -12.24410 -12.03165 -12.01411 -11.66210 -11.24054 -11.22527 -11.03607 -10.93242 -10.82153 -10.74492 -10.55558 -10.34574 -10.26596 -9.03076 -8.93823 -8.61996 -7.84930 -7.74080 -6.28602 -4.75314 0.90083 1.07077 1.90855 2.36924 2.79712 3.11461 3.17147 3.18445 3.39970 4.00362 4.03324 4.45832 4.52611 4.56678 4.75105 4.95806 5.07125 5.13614 5.15898 5.19534 5.31261 5.39872 5.50187 5.57113 5.73692 5.77703 5.87035 5.99181 6.13349 6.19751 6.46929 6.56178 6.71603 7.34503 7.71327 7.85272 7.90853 8.19374 8.92716 9.33004 10.46661 10.64691 Molecular weight = 329.07amu Principal moments of inertia in cm(-1) A = 0.010557 B = 0.003995 C = 0.003126 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2651.518988 B = 7007.344123 C = 8956.214857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.362 6.362 3 C 0.467 3.533 4 O -0.505 6.505 5 C -0.123 4.123 6 C 0.205 3.795 7 H 0.107 0.893 8 N -0.758 5.758 9 C 0.554 3.446 10 O -0.575 6.575 11 C -0.543 4.543 12 H 0.069 0.931 13 C 0.089 3.911 14 N -0.765 5.765 15 Si 0.908 3.092 16 H -0.268 1.268 17 H -0.280 1.280 18 H -0.267 1.267 19 C -0.051 4.051 20 C -0.083 4.083 21 C -0.089 4.089 22 C -0.077 4.077 23 Cl -0.061 7.061 24 C 0.104 3.896 25 F -0.130 7.130 26 C -0.135 4.135 27 H 0.060 0.940 28 H 0.097 0.903 29 H 0.062 0.938 30 H 0.101 0.899 31 H 0.122 0.878 32 H 0.383 0.617 33 H 0.270 0.730 34 H 0.150 0.850 35 H 0.141 0.859 36 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.178 -3.150 -12.774 16.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.279 6.279 3 C 0.310 3.690 4 O -0.392 6.392 5 C -0.162 4.162 6 C 0.098 3.902 7 H 0.125 0.875 8 N -0.414 5.414 9 C 0.359 3.641 10 O -0.457 6.457 11 C -0.580 4.580 12 H 0.087 0.913 13 C -0.132 4.132 14 N -0.393 5.393 15 Si 0.733 3.267 16 H -0.192 1.192 17 H -0.205 1.205 18 H -0.192 1.192 19 C -0.052 4.052 20 C -0.101 4.101 21 C -0.107 4.107 22 C -0.105 4.105 23 Cl -0.032 7.032 24 C 0.084 3.916 25 F -0.108 7.108 26 C -0.154 4.154 27 H 0.079 0.921 28 H 0.115 0.885 29 H 0.081 0.919 30 H 0.119 0.881 31 H 0.140 0.860 32 H 0.216 0.784 33 H 0.081 0.919 34 H 0.168 0.832 35 H 0.159 0.841 36 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -10.950 -2.699 -12.005 16.471 hybrid contribution 1.068 -0.055 -0.680 1.268 sum -9.882 -2.754 -12.685 16.314 Atomic orbital electron populations 1.23205 0.76867 1.03315 1.02424 1.86534 1.23087 1.33959 1.84341 1.23862 0.92185 0.81155 0.71762 1.90596 1.67293 1.36044 1.45303 1.22015 0.86816 1.00709 1.06675 1.19161 0.86028 0.92746 0.92313 0.87541 1.46363 1.02769 1.81766 1.10499 1.18283 0.89394 0.76400 0.80036 1.90628 1.62572 1.54248 1.38290 1.20823 0.89832 1.53453 0.93843 0.91304 1.25692 0.99462 0.92572 0.95458 1.69990 1.36060 1.34097 0.99149 0.86419 0.83038 0.79506 0.77746 1.19238 1.20531 1.19213 1.20145 0.94091 0.95752 0.95174 1.21313 0.96028 0.95551 0.97240 1.20973 0.99385 0.99776 0.90587 1.20979 0.97636 1.03682 0.88182 1.98367 1.92155 1.88177 1.24536 1.17294 0.90426 0.99642 0.84230 1.91527 1.74269 1.91127 1.53902 1.21003 1.01934 1.02618 0.89891 0.92097 0.88481 0.91913 0.88106 0.86008 0.78384 0.91893 0.83217 0.84139 0.83562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.36 10.56 101.05 1.07 1.42 16 2 O -0.36 -4.90 10.57 -39.27 -0.41 -5.31 16 3 C 0.47 7.07 7.64 36.01 0.28 7.35 16 4 O -0.50 -8.18 12.61 -18.75 -0.24 -8.42 16 5 C -0.12 -1.91 5.56 -27.88 -0.15 -2.06 16 6 C 0.20 3.56 2.02 -69.08 -0.14 3.43 16 7 H 0.11 2.18 7.00 -51.93 -0.36 1.82 16 8 N -0.76 -15.14 5.01 -56.35 -0.28 -15.42 16 9 C 0.55 14.46 7.72 -12.99 -0.10 14.36 16 10 O -0.57 -17.24 14.64 5.19 0.08 -17.16 16 11 C -0.54 -14.36 9.54 -35.63 -0.34 -14.70 16 12 H 0.07 1.66 7.85 -52.49 -0.41 1.25 16 13 C 0.09 2.35 5.50 -17.37 -0.10 2.26 16 14 N -0.76 -21.88 11.83 55.55 0.66 -21.22 16 15 Si 0.91 19.30 29.56 -169.99 -5.02 14.28 16 16 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 17 H -0.28 -5.86 7.11 56.52 0.40 -5.45 16 18 H -0.27 -5.52 7.11 56.52 0.40 -5.12 16 19 C -0.05 -0.75 4.51 -104.63 -0.47 -1.22 16 20 C -0.08 -1.14 8.15 -39.58 -0.32 -1.46 16 21 C -0.09 -1.08 9.83 -39.56 -0.39 -1.47 16 22 C -0.08 -1.00 6.33 -39.44 -0.25 -1.25 16 23 Cl -0.06 -0.73 28.62 -51.86 -1.48 -2.21 16 24 C 0.10 1.42 7.28 -39.39 -0.29 1.13 16 25 F -0.13 -1.80 16.84 2.25 0.04 -1.77 16 26 C -0.14 -1.84 9.03 -39.52 -0.36 -2.20 16 27 H 0.06 0.58 8.13 -51.93 -0.42 0.16 16 28 H 0.10 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.06 0.63 8.13 -51.93 -0.42 0.21 16 30 H 0.10 1.32 8.12 -51.93 -0.42 0.90 16 31 H 0.12 2.12 8.14 -51.93 -0.42 1.70 16 32 H 0.38 6.71 6.85 -40.82 -0.28 6.43 16 33 H 0.27 7.06 8.29 -40.82 -0.34 6.73 16 34 H 0.15 2.10 6.87 -52.48 -0.36 1.74 16 35 H 0.14 1.40 8.06 -52.49 -0.42 0.97 16 36 H 0.15 1.80 6.90 -52.48 -0.36 1.44 16 LS Contribution 337.12 15.07 5.08 5.08 Total: -1.00 -32.12 337.12 -6.60 -38.73 By element: Atomic # 1 Polarization: 11.30 SS G_CDS: -3.45 Total: 7.85 kcal Atomic # 6 Polarization: 7.14 SS G_CDS: -1.56 Total: 5.58 kcal Atomic # 7 Polarization: -37.02 SS G_CDS: 0.37 Total: -36.64 kcal Atomic # 8 Polarization: -30.32 SS G_CDS: -0.58 Total: -30.90 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.04 Total: -1.77 kcal Atomic # 14 Polarization: 19.30 SS G_CDS: -5.02 Total: 14.28 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.48 Total: -2.21 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -32.12 -6.60 -38.73 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195567597.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.536 kcal (2) G-P(sol) polarization free energy of solvation -32.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds