Wall clock time and date at job start Tue Mar 31 2020 04:55:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.46901 * 110.99949 * 2 1 4 4 C 1.46897 * 110.99938 * 123.95207 * 2 1 3 5 5 C 1.53005 * 109.47156 * 66.04810 * 4 2 1 6 6 O 1.42897 * 109.47131 * 64.99892 * 5 4 2 7 7 C 1.42902 * 114.00035 * 180.02562 * 6 5 4 8 8 C 1.52996 * 109.47450 * 180.02562 * 7 6 5 9 9 N 1.46505 * 109.47308 * 64.99073 * 8 7 6 10 10 C 1.34773 * 120.00225 * 179.97438 * 9 8 7 11 11 O 1.21587 * 119.99684 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00300 * 180.02562 * 10 9 8 13 13 C 1.46498 * 120.00360 * 180.02562 * 12 10 9 14 14 C 1.53071 * 109.44009 * 84.79625 * 13 12 10 15 15 C 1.53201 * 109.29371 * 181.23934 * 14 13 12 16 16 N 1.46928 * 108.89275 * 305.57634 * 15 14 13 17 17 C 1.36934 * 120.63265 * 233.51651 * 16 15 14 18 18 H 1.07997 * 119.99862 * 151.82898 * 17 16 15 19 19 C 1.38806 * 120.00015 * 331.83027 * 17 16 15 20 20 N 1.31624 * 120.00191 * 343.08772 * 19 17 16 21 21 Si 1.86800 * 120.00146 * 163.08448 * 19 17 16 22 22 H 1.48503 * 109.47142 * 60.00161 * 21 19 17 23 23 H 1.48498 * 109.47084 * 180.02562 * 21 19 17 24 24 H 1.48500 * 109.47267 * 300.00095 * 21 19 17 25 25 C 1.46932 * 118.73342 * 53.53882 * 16 15 14 26 26 C 1.53045 * 109.46092 * 205.00269 * 13 12 10 27 27 H 1.08999 * 109.47052 * 296.05041 * 1 2 3 28 28 H 1.09000 * 109.47191 * 56.04485 * 1 2 3 29 29 H 1.08994 * 109.47116 * 176.04612 * 1 2 3 30 30 H 1.09002 * 109.46812 * 183.95419 * 3 2 1 31 31 H 1.09003 * 109.47144 * 303.95319 * 3 2 1 32 32 H 1.08993 * 109.47278 * 63.95579 * 3 2 1 33 33 H 1.08999 * 109.47060 * 306.04695 * 4 2 1 34 34 H 1.09001 * 109.46988 * 186.04464 * 4 2 1 35 35 H 1.09003 * 109.46713 * 305.00260 * 5 4 2 36 36 H 1.08999 * 109.46943 * 184.99947 * 5 4 2 37 37 H 1.08993 * 109.47461 * 59.99604 * 7 6 5 38 38 H 1.09002 * 109.46679 * 299.99699 * 7 6 5 39 39 H 1.09000 * 109.46942 * 304.99807 * 8 7 6 40 40 H 1.08997 * 109.47369 * 184.99200 * 8 7 6 41 41 H 0.97005 * 119.99867 * 0.02562 * 9 8 7 42 42 H 0.97005 * 119.99791 * 0.02562 * 12 10 9 43 43 H 1.08998 * 109.45866 * 324.97703 * 13 12 10 44 44 H 1.09002 * 109.39343 * 61.36176 * 14 13 12 45 45 H 1.09003 * 109.62467 * 301.25403 * 14 13 12 46 46 H 1.09000 * 109.58250 * 185.72113 * 15 14 13 47 47 H 1.08995 * 109.58477 * 65.43833 * 15 14 13 48 48 H 0.96995 * 120.00379 * 180.02562 * 20 19 17 49 49 H 1.08996 * 109.59017 * 66.18099 * 25 16 15 50 50 H 1.09009 * 109.58200 * 186.46074 * 25 16 15 51 51 H 1.09002 * 109.49555 * 58.67538 * 26 13 12 52 52 H 1.08992 * 109.52043 * 298.59539 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9954 -0.7659 1.1376 5 6 1.6315 -2.2426 0.9704 6 8 2.2956 -2.7696 -0.1799 7 6 2.0214 -4.1499 -0.4280 8 6 2.7811 -4.6047 -1.6757 9 7 4.2224 -4.5352 -1.4223 10 6 5.0941 -4.8912 -2.3866 11 8 4.6843 -5.2698 -3.4669 12 7 6.4200 -4.8278 -2.1534 13 6 7.3675 -5.2143 -3.2017 14 6 7.6170 -4.0214 -4.1279 15 6 8.5841 -4.4381 -5.2406 16 7 9.7987 -4.9966 -4.6309 17 6 11.0341 -4.5085 -4.9635 18 1 11.8444 -4.5591 -4.2513 19 6 11.2450 -3.9489 -6.2161 20 7 10.3902 -4.1760 -7.1909 21 14 12.7420 -2.8732 -6.5185 22 1 13.9759 -3.6594 -6.2646 23 1 12.7362 -2.4013 -7.9265 24 1 12.7037 -1.7033 -5.6047 25 6 9.6624 -6.0889 -3.6577 26 6 8.6861 -5.6531 -2.5606 27 1 -0.3633 0.4513 0.9233 28 1 -0.3633 0.5740 -0.8524 29 1 -0.3633 -1.0252 -0.0709 30 1 3.0828 1.3432 -0.0709 31 1 1.5898 1.9164 -0.8525 32 1 1.7045 1.8723 0.9232 33 1 1.5611 -0.3872 2.0628 34 1 3.0797 -0.6611 1.1756 35 1 0.5532 -2.3388 0.8432 36 1 1.9439 -2.7963 1.8558 37 1 0.9513 -4.2855 -0.5842 38 1 2.3416 -4.7435 0.4284 39 1 2.5276 -3.9541 -2.5126 40 1 2.5036 -5.6310 -1.9161 41 1 4.5493 -4.2335 -0.5603 42 1 6.7469 -4.5261 -1.2913 43 1 6.9524 -6.0398 -3.7799 44 1 8.0528 -3.2030 -3.5547 45 1 6.6743 -3.6963 -4.5681 46 1 8.8447 -3.5679 -5.8431 47 1 8.1124 -5.1914 -5.8715 48 1 10.5377 -3.7852 -8.0663 49 1 9.2773 -6.9777 -4.1575 50 1 10.6350 -6.3097 -3.2177 51 1 8.5019 -6.4882 -1.8847 52 1 9.1143 -4.8207 -2.0022 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000615934214.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:55:58 Heat of formation + Delta-G solvation = -47.067076 kcal Electronic energy + Delta-G solvation = -28438.502537 eV Core-core repulsion = 24474.018188 eV Total energy + Delta-G solvation = -3964.484349 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 328.226 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -39.84934 -38.83292 -37.53105 -37.05369 -34.64720 -34.16974 -32.07926 -30.79538 -29.92673 -29.48056 -28.35825 -27.97004 -24.91096 -24.44297 -22.93128 -22.13248 -21.73465 -21.38557 -20.47840 -19.34421 -18.00859 -17.22819 -16.86840 -16.70315 -16.13128 -15.50397 -15.45274 -15.21788 -14.90084 -14.72230 -14.27951 -14.14342 -13.72797 -13.62192 -13.40466 -13.29332 -12.91909 -12.76439 -12.64644 -12.55735 -12.28576 -12.22434 -12.12269 -11.81149 -11.67263 -11.39733 -11.17047 -11.03728 -10.84889 -10.66330 -10.29611 -10.18284 -10.02186 -9.94311 -9.83280 -9.67012 -9.46416 -9.00814 -8.69690 -8.50521 -8.28712 -6.61009 -5.71732 -3.14881 2.93970 3.28630 3.42861 3.48713 3.49688 3.54671 3.56645 4.46431 4.51661 4.55056 4.65388 4.75241 4.80634 4.87840 4.95787 4.99162 5.02806 5.07635 5.19129 5.24454 5.39635 5.43246 5.47703 5.53506 5.54435 5.55680 5.57066 5.75474 5.77707 5.94078 6.19247 6.32930 6.47762 6.56101 6.57080 6.60178 6.62742 6.70759 6.73824 6.87246 6.92236 7.01387 7.06691 7.25291 7.48665 7.77469 7.85832 8.30444 8.52197 8.92392 9.27837 9.91320 10.48486 11.36709 Molecular weight = 328.23amu Principal moments of inertia in cm(-1) A = 0.014721 B = 0.002160 C = 0.001985 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1901.565915 B =12962.095614 C =14102.901705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.538 5.538 3 C 0.025 3.975 4 C 0.055 3.945 5 C 0.065 3.935 6 O -0.366 6.366 7 C 0.050 3.950 8 C 0.145 3.855 9 N -0.746 5.746 10 C 0.702 3.298 11 O -0.592 6.592 12 N -0.740 5.740 13 C 0.169 3.831 14 C -0.146 4.146 15 C 0.174 3.826 16 N -0.593 5.593 17 C -0.254 4.254 18 H 0.065 0.935 19 C 0.002 3.998 20 N -0.901 5.901 21 Si 0.903 3.097 22 H -0.283 1.283 23 H -0.291 1.291 24 H -0.284 1.284 25 C 0.149 3.851 26 C -0.138 4.138 27 H 0.022 0.978 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.022 0.978 33 H 0.047 0.953 34 H 0.085 0.915 35 H 0.049 0.951 36 H 0.052 0.948 37 H 0.063 0.937 38 H 0.052 0.948 39 H 0.074 0.926 40 H 0.078 0.922 41 H 0.395 0.605 42 H 0.389 0.611 43 H 0.080 0.920 44 H 0.052 0.948 45 H 0.054 0.946 46 H 0.088 0.912 47 H 0.020 0.980 48 H 0.254 0.746 49 H 0.020 0.980 50 H 0.057 0.943 51 H 0.054 0.946 52 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.508 4.679 21.057 29.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.262 5.262 3 C -0.123 4.123 4 C -0.073 4.073 5 C -0.012 4.012 6 O -0.285 6.285 7 C -0.028 4.028 8 C 0.020 3.980 9 N -0.403 5.403 10 C 0.402 3.598 11 O -0.470 6.470 12 N -0.394 5.394 13 C 0.065 3.935 14 C -0.187 4.187 15 C 0.047 3.953 16 N -0.315 5.315 17 C -0.384 4.384 18 H 0.082 0.918 19 C -0.197 4.197 20 N -0.545 5.545 21 Si 0.732 3.268 22 H -0.209 1.209 23 H -0.217 1.217 24 H -0.211 1.211 25 C 0.021 3.979 26 C -0.178 4.178 27 H 0.041 0.959 28 H 0.088 0.912 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.041 0.959 33 H 0.065 0.935 34 H 0.103 0.897 35 H 0.067 0.933 36 H 0.070 0.930 37 H 0.081 0.919 38 H 0.071 0.929 39 H 0.092 0.908 40 H 0.096 0.904 41 H 0.228 0.772 42 H 0.222 0.778 43 H 0.098 0.902 44 H 0.071 0.929 45 H 0.072 0.928 46 H 0.106 0.894 47 H 0.039 0.961 48 H 0.064 0.936 49 H 0.038 0.962 50 H 0.076 0.924 51 H 0.073 0.927 52 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -20.593 4.252 19.284 28.531 hybrid contribution 0.474 1.187 1.584 2.035 sum -20.119 5.439 20.868 29.493 Atomic orbital electron populations 1.22450 0.87582 1.02285 1.00366 1.61898 1.07687 1.13801 1.42783 1.22391 1.01169 0.88446 1.00319 1.22168 1.01529 0.92122 0.91476 1.22531 0.96433 0.93809 0.88443 1.88081 1.70105 1.23928 1.46358 1.22775 0.99267 0.83257 0.97456 1.21122 0.78980 1.01270 0.96632 1.45004 1.05738 1.72998 1.16592 1.15994 0.81293 0.78623 0.83939 1.90925 1.78084 1.53954 1.23991 1.45496 1.04186 1.71744 1.17946 1.20883 0.87135 0.97929 0.87511 1.22576 1.00012 0.97074 0.99025 1.20756 0.84431 0.98808 0.91278 1.44097 1.02860 1.36600 1.47976 1.19120 0.88641 1.34507 0.96094 0.91754 1.25067 0.97982 1.01570 0.95055 1.70029 1.37675 1.45423 1.01390 0.86372 0.82669 0.80871 0.76839 1.20922 1.21664 1.21089 1.20837 0.96197 0.90895 0.89923 1.22332 0.95615 1.00389 0.99462 0.95921 0.91243 0.91277 0.91071 0.91213 0.95906 0.93473 0.89672 0.93263 0.93032 0.91891 0.92938 0.90754 0.90408 0.77156 0.77815 0.90176 0.92882 0.92758 0.89377 0.96147 0.93550 0.96213 0.92413 0.92730 0.91962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.14 9.33 60.07 0.56 0.70 16 2 N -0.54 -4.52 4.97 -251.26 -1.25 -5.77 16 3 C 0.02 0.18 9.57 60.07 0.57 0.75 16 4 C 0.06 0.38 5.34 -3.82 -0.02 0.36 16 5 C 0.06 0.43 5.99 37.16 0.22 0.66 16 6 O -0.37 -3.41 10.24 -35.23 -0.36 -3.77 16 7 C 0.05 0.37 6.07 37.16 0.23 0.60 16 8 C 0.14 1.53 6.06 -4.04 -0.02 1.51 16 9 N -0.75 -8.93 5.51 -65.23 -0.36 -9.29 16 10 C 0.70 11.46 8.53 -86.92 -0.74 10.72 16 11 O -0.59 -12.36 16.01 5.29 0.08 -12.27 16 12 N -0.74 -11.23 5.08 -58.62 -0.30 -11.53 16 13 C 0.17 3.13 2.41 -67.87 -0.16 2.96 16 14 C -0.15 -3.10 5.66 -26.59 -0.15 -3.25 16 15 C 0.17 4.39 5.30 -3.71 -0.02 4.37 16 16 N -0.59 -15.19 3.00 -172.31 -0.52 -15.71 16 17 C -0.25 -7.07 9.58 -15.06 -0.14 -7.21 16 18 H 0.06 1.74 7.88 -52.49 -0.41 1.33 16 19 C 0.00 0.06 4.92 -17.43 -0.09 -0.03 16 20 N -0.90 -26.88 11.20 55.49 0.62 -26.26 16 21 Si 0.90 22.03 29.59 -169.99 -5.03 17.01 16 22 H -0.28 -6.79 7.11 56.52 0.40 -6.38 16 23 H -0.29 -7.16 7.11 56.52 0.40 -6.75 16 24 H -0.28 -6.86 7.11 56.52 0.40 -6.46 16 25 C 0.15 3.14 6.52 -3.71 -0.02 3.12 16 26 C -0.14 -2.38 5.55 -26.61 -0.15 -2.53 16 27 H 0.02 0.13 8.14 -51.93 -0.42 -0.30 16 28 H 0.07 0.45 8.12 -51.93 -0.42 0.02 16 29 H 0.07 0.44 6.37 -51.93 -0.33 0.11 16 30 H 0.07 0.53 8.12 -51.93 -0.42 0.11 16 31 H 0.07 0.48 8.12 -51.93 -0.42 0.06 16 32 H 0.02 0.14 8.14 -51.93 -0.42 -0.28 16 33 H 0.05 0.26 8.12 -51.93 -0.42 -0.16 16 34 H 0.08 0.64 8.06 -51.93 -0.42 0.22 16 35 H 0.05 0.29 6.34 -51.93 -0.33 -0.04 16 36 H 0.05 0.26 8.14 -51.93 -0.42 -0.16 16 37 H 0.06 0.38 8.14 -51.93 -0.42 -0.04 16 38 H 0.05 0.32 8.14 -51.93 -0.42 -0.11 16 39 H 0.07 0.95 8.14 -51.93 -0.42 0.52 16 40 H 0.08 0.81 8.14 -51.93 -0.42 0.38 16 41 H 0.40 3.75 8.49 -40.82 -0.35 3.40 16 42 H 0.39 4.68 8.62 -40.82 -0.35 4.33 16 43 H 0.08 1.67 7.58 -51.93 -0.39 1.28 16 44 H 0.05 1.12 8.14 -51.93 -0.42 0.69 16 45 H 0.05 1.18 8.14 -51.93 -0.42 0.76 16 46 H 0.09 2.48 6.06 -51.93 -0.31 2.16 16 47 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 48 H 0.25 7.35 8.31 -40.82 -0.34 7.01 16 49 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 50 H 0.06 1.17 7.93 -51.92 -0.41 0.76 16 51 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 52 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 LS Contribution 411.69 15.07 6.20 6.20 Total: -1.00 -34.59 411.69 -10.47 -45.06 By element: Atomic # 1 Polarization: 13.23 SS G_CDS: -9.63 Total: 3.60 kcal Atomic # 6 Polarization: 12.68 SS G_CDS: 0.06 Total: 12.74 kcal Atomic # 7 Polarization: -66.76 SS G_CDS: -1.80 Total: -68.56 kcal Atomic # 8 Polarization: -15.77 SS G_CDS: -0.28 Total: -16.04 kcal Atomic # 14 Polarization: 22.03 SS G_CDS: -5.03 Total: 17.01 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -34.59 -10.47 -45.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000615934214.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.009 kcal (2) G-P(sol) polarization free energy of solvation -34.590 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds