Wall clock time and date at job start Tue Mar 31 2020 06:02:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30533 * 120.24210 * 2 1 4 4 N 1.39671 * 121.57936 * 179.89957 * 3 2 1 5 5 C 1.36622 * 119.18743 * 179.58946 * 4 3 2 6 6 H 1.08003 * 119.99877 * 179.97438 * 5 4 3 7 7 C 1.39176 * 120.00559 * 359.97438 * 5 4 3 8 8 N 1.31193 * 119.99652 * 359.97438 * 7 5 4 9 9 Si 1.86795 * 120.00306 * 179.97438 * 7 5 4 10 10 H 1.48498 * 109.47177 * 59.99934 * 9 7 5 11 11 H 1.48508 * 109.47269 * 179.97438 * 9 7 5 12 12 H 1.48498 * 109.47388 * 299.99908 * 9 7 5 13 13 C 1.34738 * 121.62265 * 359.57079 * 4 3 2 14 14 O 1.21930 * 120.13959 * 179.97438 * 13 4 3 15 15 C 1.41187 * 119.72362 * 0.02562 * 13 4 3 16 16 C 1.40383 * 118.81872 * 0.16025 * 15 13 4 17 17 C 1.40714 * 107.09682 * 180.29192 * 16 15 13 18 18 N 1.30647 * 108.60580 * 359.74579 * 17 16 15 19 19 N 1.36619 * 134.41435 * 180.02562 * 15 13 4 20 20 C 1.39937 * 125.98966 * 359.97438 * 19 15 13 21 21 C 1.38931 * 120.06710 * 324.73930 * 20 19 15 22 22 C 1.38089 * 119.95263 * 179.97438 * 21 20 19 23 23 C 1.38295 * 120.08317 * 0.02562 * 22 21 20 24 24 C 1.38388 * 120.13624 * 359.74606 * 23 22 21 25 25 Cl 1.73599 * 119.97716 * 180.27358 * 24 23 22 26 26 C 1.38238 * 120.04709 * 0.50902 * 24 23 22 27 27 H 1.09002 * 109.47512 * 270.75159 * 1 2 3 28 28 H 1.08999 * 109.47221 * 30.75969 * 1 2 3 29 29 H 1.09009 * 109.46783 * 150.75737 * 1 2 3 30 30 H 0.96994 * 119.99979 * 180.02562 * 8 7 5 31 31 H 1.07997 * 125.69636 * 179.72633 * 17 16 15 32 32 H 1.07998 * 120.02446 * 359.97438 * 21 20 19 33 33 H 1.07996 * 119.95479 * 180.02562 * 22 21 20 34 34 H 1.07998 * 119.92718 * 179.97438 * 23 22 21 35 35 H 1.08002 * 120.04786 * 179.77462 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1645 1.1277 0.0000 4 7 3.5608 1.1603 0.0021 5 6 4.1991 2.3682 -0.0066 6 1 5.2783 2.4087 -0.0047 7 6 3.4586 3.5466 -0.0178 8 7 2.1476 3.4974 -0.0207 9 14 4.3313 5.1981 -0.0289 10 1 5.1845 5.2990 -1.2402 11 1 3.3247 6.2899 -0.0408 12 1 5.1785 5.3185 1.1847 13 6 4.2938 0.0298 0.0128 14 8 5.5116 0.0898 0.0139 15 6 3.6459 -1.2246 0.0216 16 6 2.2426 -1.2614 0.0156 17 6 1.8642 -2.6166 0.0335 18 7 2.9448 -3.3510 0.0437 19 7 4.0742 -2.5219 0.0335 20 6 5.4071 -2.9478 0.0398 21 6 6.3704 -2.2304 -0.6584 22 6 7.6852 -2.6525 -0.6501 23 6 8.0440 -3.7887 0.0519 24 6 7.0883 -4.5033 0.7525 25 17 7.5446 -5.9250 1.6382 26 6 5.7695 -4.0887 0.7437 27 1 -0.3634 0.0135 1.0276 28 1 -0.3633 0.8831 -0.5256 29 1 -0.3633 -0.8968 -0.5021 30 1 1.6315 4.3186 -0.0289 31 1 0.8500 -2.9878 0.0383 32 1 6.0912 -1.3432 -1.2073 33 1 8.4341 -2.0946 -1.1926 34 1 9.0730 -4.1168 0.0563 35 1 5.0230 -4.6485 1.2875 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000013970694.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:02:35 Heat of formation + Delta-G solvation = 133.013821 kcal Electronic energy + Delta-G solvation = -25170.501013 eV Core-core repulsion = 21391.199786 eV Total energy + Delta-G solvation = -3779.301227 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 330.062 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.27094 -39.08967 -38.47921 -36.51081 -35.97176 -34.08508 -32.89737 -31.82866 -30.76637 -29.90004 -28.55135 -27.89011 -25.52142 -23.50730 -22.94564 -22.29332 -21.52302 -19.91046 -18.99803 -17.74955 -16.59271 -16.38725 -15.82145 -15.58521 -15.33639 -14.92583 -14.57294 -14.12047 -13.97971 -13.72576 -13.65573 -13.28223 -13.17804 -12.92579 -12.12620 -11.96425 -11.82035 -11.72851 -11.57286 -11.48446 -11.30620 -11.13073 -10.92588 -10.84331 -10.75351 -10.63952 -9.87698 -9.56194 -9.45611 -8.77662 -8.70399 -8.55074 -8.18739 -7.38408 -6.77941 -4.31452 0.89637 1.34782 1.82103 2.09298 2.29870 2.62330 2.96261 2.97365 3.00334 3.21036 3.54552 3.78544 3.98316 4.24229 4.80085 4.90774 4.95658 4.99619 5.12539 5.31930 5.40057 5.45379 5.56388 5.72516 5.75409 5.91889 6.03565 6.13680 6.21719 6.23482 6.50552 6.53673 6.70356 6.79859 6.88218 6.92314 7.09093 7.49999 7.63571 7.88320 8.07856 8.52765 9.16486 9.47590 10.07956 Molecular weight = 330.06amu Principal moments of inertia in cm(-1) A = 0.015434 B = 0.003925 C = 0.003225 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1813.704235 B = 7132.207577 C = 8679.774667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 C 0.079 3.921 3 N -0.180 5.180 4 N -0.190 5.190 5 C -0.269 4.269 6 H 0.135 0.865 7 C 0.038 3.962 8 N -0.750 5.750 9 Si 0.942 3.058 10 H -0.263 1.263 11 H -0.274 1.274 12 H -0.263 1.263 13 C 0.425 3.575 14 O -0.593 6.593 15 C 0.036 3.964 16 C -0.207 4.207 17 C 0.086 3.914 18 N -0.276 5.276 19 N -0.314 5.314 20 C 0.179 3.821 21 C -0.087 4.087 22 C -0.092 4.092 23 C -0.122 4.122 24 C -0.028 4.028 25 Cl -0.075 7.075 26 C -0.113 4.113 27 H 0.068 0.932 28 H 0.076 0.924 29 H 0.066 0.934 30 H 0.278 0.722 31 H 0.192 0.808 32 H 0.156 0.844 33 H 0.138 0.862 34 H 0.133 0.867 35 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.907 -8.104 -0.524 8.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C -0.094 4.094 3 N 0.000 5.000 4 N 0.011 4.989 5 C -0.404 4.404 6 H 0.152 0.848 7 C -0.180 4.180 8 N -0.379 5.379 9 Si 0.765 3.235 10 H -0.188 1.188 11 H -0.199 1.199 12 H -0.188 1.188 13 C 0.226 3.774 14 O -0.482 6.482 15 C -0.089 4.089 16 C -0.223 4.223 17 C -0.106 4.106 18 N -0.092 5.092 19 N -0.094 5.094 20 C 0.085 3.915 21 C -0.108 4.108 22 C -0.111 4.111 23 C -0.141 4.141 24 C -0.055 4.055 25 Cl -0.047 7.047 26 C -0.134 4.134 27 H 0.087 0.913 28 H 0.095 0.905 29 H 0.085 0.915 30 H 0.089 0.911 31 H 0.209 0.791 32 H 0.173 0.827 33 H 0.156 0.844 34 H 0.151 0.849 35 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.778 -8.352 -0.427 8.550 hybrid contribution 0.072 0.475 0.218 0.528 sum 1.850 -7.877 -0.209 8.094 Atomic orbital electron populations 1.20224 0.87495 1.02612 1.02298 1.22890 0.96733 0.86333 1.03425 1.76373 0.88854 1.20242 1.14511 1.45481 1.01712 1.06367 1.45306 1.20416 0.94028 0.79781 1.46144 0.84775 1.25807 0.95616 1.00867 0.95739 1.70217 1.05143 1.29716 1.32817 0.85745 0.79150 0.78552 0.80097 1.18776 1.19891 1.18790 1.15779 0.87863 0.82821 0.90930 1.90708 1.11828 1.85762 1.59945 1.19931 0.93822 0.86984 1.08122 1.20430 0.91995 0.94446 1.15400 1.23670 0.97822 0.90507 0.98581 1.77038 0.91363 1.17780 1.23051 1.44985 1.03092 1.01801 1.59569 1.17176 0.80500 0.95556 0.98237 1.21702 0.92319 0.99314 0.97469 1.20921 0.95659 0.95492 0.99042 1.21034 0.99043 0.95882 0.98174 1.20475 0.93851 0.91392 0.99757 1.98345 1.92602 1.38939 1.74785 1.20685 0.95001 0.97425 1.00320 0.91286 0.90519 0.91477 0.91059 0.79079 0.82711 0.84446 0.84928 0.84451 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.01 10.19 36.01 0.37 -0.64 16 2 C 0.08 1.63 7.10 -80.02 -0.57 1.06 16 3 N -0.18 -4.37 8.60 34.90 0.30 -4.07 16 4 N -0.19 -4.96 3.62 -13.72 -0.05 -5.01 16 5 C -0.27 -6.92 9.60 -15.07 -0.14 -7.07 16 6 H 0.13 3.43 7.09 -52.48 -0.37 3.06 16 7 C 0.04 0.88 5.49 -17.48 -0.10 0.79 16 8 N -0.75 -18.00 11.23 55.50 0.62 -17.37 16 9 Si 0.94 17.79 29.55 -169.99 -5.02 12.76 16 10 H -0.26 -4.93 7.11 56.52 0.40 -4.53 16 11 H -0.27 -4.98 7.11 56.52 0.40 -4.58 16 12 H -0.26 -4.97 7.11 56.52 0.40 -4.57 16 13 C 0.42 10.96 7.29 -15.16 -0.11 10.85 16 14 O -0.59 -15.79 12.65 4.98 0.06 -15.72 16 15 C 0.04 0.84 6.63 -83.81 -0.56 0.29 16 16 C -0.21 -4.24 6.20 -105.03 -0.65 -4.89 16 17 C 0.09 1.46 11.87 -17.12 -0.20 1.26 16 18 N -0.28 -5.26 12.24 30.77 0.38 -4.89 16 19 N -0.31 -6.68 3.76 -8.18 -0.03 -6.71 16 20 C 0.18 3.51 6.36 -83.67 -0.53 2.98 16 21 C -0.09 -1.66 8.00 -39.38 -0.32 -1.97 16 22 C -0.09 -1.40 10.04 -39.62 -0.40 -1.79 16 23 C -0.12 -1.68 9.83 -39.51 -0.39 -2.07 16 24 C -0.03 -0.41 6.32 -39.53 -0.25 -0.66 16 25 Cl -0.08 -0.98 28.95 -51.86 -1.50 -2.48 16 26 C -0.11 -1.94 9.54 -39.35 -0.38 -2.32 16 27 H 0.07 0.93 8.14 -51.93 -0.42 0.51 16 28 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 29 H 0.07 0.79 8.02 -51.92 -0.42 0.37 16 30 H 0.28 6.06 8.30 -40.82 -0.34 5.72 16 31 H 0.19 2.26 8.06 -52.49 -0.42 1.84 16 32 H 0.16 3.31 5.67 -52.49 -0.30 3.01 16 33 H 0.14 1.71 8.06 -52.49 -0.42 1.28 16 34 H 0.13 1.45 8.06 -52.49 -0.42 1.02 16 35 H 0.14 2.28 8.06 -52.49 -0.42 1.86 16 LS Contribution 323.98 15.07 4.88 4.88 Total: -1.00 -29.72 323.98 -7.34 -37.06 By element: Atomic # 1 Polarization: 8.50 SS G_CDS: -2.76 Total: 5.75 kcal Atomic # 6 Polarization: 0.03 SS G_CDS: -4.22 Total: -4.19 kcal Atomic # 7 Polarization: -39.28 SS G_CDS: 1.22 Total: -38.06 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: 0.06 Total: -15.72 kcal Atomic # 14 Polarization: 17.79 SS G_CDS: -5.02 Total: 12.76 kcal Atomic # 17 Polarization: -0.98 SS G_CDS: -1.50 Total: -2.48 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -29.72 -7.34 -37.06 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000013970694.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.071 kcal (2) G-P(sol) polarization free energy of solvation -29.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 140.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.058 kcal (6) G-S(sol) free energy of system = (1) + (5) 133.014 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds