Wall clock time and date at job start Tue Mar 31 2020 05:41:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35995 * 116.99655 * 2 1 4 4 C 1.38978 * 119.89858 * 359.72645 * 3 2 1 5 5 C 1.38112 * 120.34407 * 179.76108 * 4 3 2 6 6 Br 1.89105 * 119.92853 * 180.25393 * 5 4 3 7 7 C 1.38749 * 120.13742 * 0.51445 * 5 4 3 8 8 O 1.35735 * 120.10151 * 179.76374 * 7 5 4 9 9 C 1.42903 * 117.00235 * 269.97498 * 8 7 5 10 10 C 1.40156 * 119.79094 * 359.74238 * 7 5 4 11 11 C 1.47356 * 120.16813 * 180.02562 * 10 7 5 12 12 O 1.21550 * 119.99646 * 359.97438 * 11 10 7 13 13 O 1.34770 * 119.99899 * 179.97438 * 11 10 7 14 14 C 1.34868 * 116.99695 * 180.02562 * 13 11 10 15 15 H 1.07994 * 120.00064 * 359.97438 * 14 13 11 16 16 C 1.38800 * 119.99662 * 179.97438 * 14 13 11 17 17 N 1.31420 * 119.99876 * 359.97438 * 16 14 13 18 18 Si 1.86800 * 119.99792 * 179.97438 * 16 14 13 19 19 H 1.48495 * 109.46881 * 60.00106 * 18 16 14 20 20 H 1.48498 * 109.47051 * 180.02562 * 18 16 14 21 21 H 1.48498 * 109.47215 * 299.99976 * 18 16 14 22 22 C 1.38203 * 119.89476 * 179.97438 * 3 2 1 23 23 H 1.08995 * 109.47253 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.47043 * 300.00220 * 1 2 3 25 25 H 1.08999 * 109.47144 * 59.99818 * 1 2 3 26 26 H 1.08003 * 119.83237 * 0.02562 * 4 3 2 27 27 H 1.09001 * 109.47013 * 300.00451 * 9 8 7 28 28 H 1.09000 * 109.46655 * 60.00590 * 9 8 7 29 29 H 1.09001 * 109.47137 * 180.02562 * 9 8 7 30 30 H 0.97003 * 119.99866 * 179.97438 * 17 16 14 31 31 H 1.07998 * 120.07230 * 359.96175 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 1.2873 2.3759 -0.0058 5 6 1.9046 3.6114 -0.0008 6 35 0.8603 5.1879 -0.0015 7 6 3.2894 3.6982 -0.0009 8 8 3.8953 4.9128 -0.0009 9 6 4.1854 5.4932 -1.2741 10 6 4.0605 2.5279 -0.0004 11 6 5.5317 2.6104 0.0001 12 8 6.0795 3.6955 -0.0003 13 8 6.2699 1.4828 0.0010 14 6 7.6106 1.6287 0.0020 15 1 8.0462 2.6169 0.0016 16 6 8.4306 0.5088 0.0035 17 7 7.9004 -0.6937 0.0045 18 14 10.2876 0.7109 0.0042 19 1 10.7033 1.4616 1.2161 20 1 10.9312 -0.6274 0.0052 21 1 10.7045 1.4591 -1.2089 22 6 3.4266 1.2816 0.0005 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 0.2090 2.3143 -0.0098 27 1 4.8512 4.8336 -1.8308 28 1 3.2585 5.6284 -1.8314 29 1 4.6682 6.4599 -1.1313 30 1 8.4734 -1.4764 0.0052 31 1 4.0143 0.3756 0.0016 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000023576724.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:41:38 Heat of formation + Delta-G solvation = -112.636228 kcal Electronic energy + Delta-G solvation = -20228.792843 eV Core-core repulsion = 16716.684228 eV Total energy + Delta-G solvation = -3512.108615 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 329.998 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.43243 -39.08175 -38.28285 -36.13120 -35.06567 -32.50765 -32.12936 -30.01595 -29.32512 -27.53973 -26.13164 -25.62296 -23.53862 -21.99902 -20.36593 -18.04962 -17.80429 -17.40222 -16.71458 -16.21076 -15.85968 -15.27235 -14.76434 -14.56582 -14.41708 -14.31172 -13.83883 -13.32406 -13.22275 -12.71098 -12.50723 -12.22246 -11.68096 -11.56686 -11.33611 -11.29848 -11.17549 -10.58347 -10.50643 -10.27778 -10.19393 -9.91858 -9.67980 -9.03508 -8.82298 -8.64521 -8.03359 -6.51574 -4.12714 0.83288 1.13729 1.55193 3.04883 3.14845 3.18368 3.20474 3.23432 3.84426 3.88007 4.20170 4.38821 4.82468 4.92736 5.04455 5.09292 5.15498 5.28058 5.35735 5.48477 5.57333 5.75440 5.80673 5.99417 6.05937 6.18647 6.51067 6.81770 7.28355 7.30947 7.73263 7.85964 8.64930 8.96511 9.76427 10.65548 Molecular weight = 330.00amu Principal moments of inertia in cm(-1) A = 0.017395 B = 0.004308 C = 0.003493 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1609.267517 B = 6497.238537 C = 8014.456062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.307 6.307 3 C 0.116 3.884 4 C -0.160 4.160 5 C -0.088 4.088 6 Br -0.039 7.039 7 C 0.135 3.865 8 O -0.306 6.306 9 C 0.049 3.951 10 C -0.063 4.063 11 C 0.429 3.571 12 O -0.529 6.529 13 O -0.202 6.202 14 C -0.370 4.370 15 H 0.099 0.901 16 C 0.042 3.958 17 N -0.855 5.855 18 Si 0.947 3.053 19 H -0.268 1.268 20 H -0.278 1.278 21 H -0.269 1.269 22 C -0.077 4.077 23 H 0.101 0.899 24 H 0.056 0.944 25 H 0.055 0.945 26 H 0.141 0.859 27 H 0.052 0.948 28 H 0.037 0.963 29 H 0.093 0.907 30 H 0.273 0.727 31 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.997 5.700 -1.886 18.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.221 6.221 3 C 0.070 3.930 4 C -0.181 4.181 5 C -0.168 4.168 6 Br 0.046 6.954 7 C 0.088 3.912 8 O -0.221 6.221 9 C -0.045 4.045 10 C -0.066 4.066 11 C 0.276 3.724 12 O -0.426 6.426 13 O -0.109 6.109 14 C -0.446 4.446 15 H 0.117 0.883 16 C -0.164 4.164 17 N -0.491 5.491 18 Si 0.771 3.229 19 H -0.193 1.193 20 H -0.203 1.203 21 H -0.194 1.194 22 C -0.096 4.096 23 H 0.119 0.881 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.159 0.841 27 H 0.071 0.929 28 H 0.056 0.944 29 H 0.111 0.889 30 H 0.083 0.917 31 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -17.015 6.243 -1.739 18.208 hybrid contribution 0.718 -0.296 -0.149 0.790 sum -16.298 5.947 -1.887 17.451 Atomic orbital electron populations 1.23090 0.78545 1.04095 1.01306 1.86179 1.21178 1.25854 1.88859 1.18717 0.91894 0.83980 0.98385 1.21069 1.00361 0.90179 1.06457 1.21748 0.92862 0.92479 1.09668 1.96644 1.68204 1.32790 1.97711 1.18200 0.87979 0.85800 0.99263 1.86009 1.77950 1.28853 1.29312 1.22867 0.99097 0.98563 0.83998 1.19561 0.92436 0.91896 1.02662 1.20205 0.86636 0.84122 0.81429 1.90686 1.72623 1.28994 1.50320 1.83898 1.20509 1.31891 1.74648 1.21299 0.76986 0.95233 1.51091 0.88326 1.25405 1.00808 0.94072 0.96095 1.69971 1.36570 0.97719 1.44797 0.85687 0.79916 0.77798 0.79502 1.19305 1.20264 1.19352 1.20956 0.91324 0.98885 0.98485 0.88056 0.92587 0.92640 0.84111 0.92949 0.94401 0.88871 0.91723 0.82154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.81 101.05 0.99 1.21 16 2 O -0.31 -4.30 10.49 -19.72 -0.21 -4.51 16 3 C 0.12 1.81 6.67 -39.32 -0.26 1.55 16 4 C -0.16 -2.22 8.76 -39.35 -0.34 -2.57 16 5 C -0.09 -1.37 6.23 -39.44 -0.25 -1.62 16 6 Br -0.04 -0.51 33.14 -68.01 -2.25 -2.76 16 7 C 0.13 2.55 5.72 -38.67 -0.22 2.33 16 8 O -0.31 -5.94 8.16 -40.84 -0.33 -6.28 16 9 C 0.05 0.79 10.48 101.05 1.06 1.85 16 10 C -0.06 -1.32 5.88 -104.88 -0.62 -1.93 16 11 C 0.43 10.95 7.83 34.44 0.27 11.22 16 12 O -0.53 -14.25 13.25 -26.64 -0.35 -14.61 16 13 O -0.20 -5.74 8.99 -21.78 -0.20 -5.94 16 14 C -0.37 -10.75 9.65 30.94 0.30 -10.45 16 15 H 0.10 2.86 6.86 -52.49 -0.36 2.50 16 16 C 0.04 1.14 5.50 -17.52 -0.10 1.05 16 17 N -0.85 -24.34 13.67 55.49 0.76 -23.58 16 18 Si 0.95 20.82 29.55 -169.99 -5.02 15.80 16 19 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 20 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 21 H -0.27 -5.77 7.11 56.52 0.40 -5.36 16 22 C -0.08 -1.45 9.55 -39.00 -0.37 -1.83 16 23 H 0.10 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.06 0.43 7.66 -51.93 -0.40 0.03 16 25 H 0.05 0.42 7.64 -51.93 -0.40 0.02 16 26 H 0.14 1.50 6.27 -52.48 -0.33 1.17 16 27 H 0.05 0.94 7.50 -51.93 -0.39 0.55 16 28 H 0.04 0.52 8.14 -51.93 -0.42 0.10 16 29 H 0.09 1.32 8.14 -51.93 -0.42 0.90 16 30 H 0.27 7.12 8.31 -40.82 -0.34 6.78 16 31 H 0.16 3.21 7.61 -52.49 -0.40 2.81 16 LS Contribution 300.93 15.07 4.53 4.53 Total: -1.00 -32.31 300.93 -5.29 -37.60 By element: Atomic # 1 Polarization: 1.60 SS G_CDS: -2.68 Total: -1.07 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: 0.46 Total: 0.82 kcal Atomic # 7 Polarization: -24.34 SS G_CDS: 0.76 Total: -23.58 kcal Atomic # 8 Polarization: -30.24 SS G_CDS: -1.09 Total: -31.33 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.02 Total: 15.80 kcal Atomic # 35 Polarization: -0.51 SS G_CDS: -2.25 Total: -2.76 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -32.31 -5.29 -37.60 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000023576724.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.041 kcal (2) G-P(sol) polarization free energy of solvation -32.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.347 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds