Wall clock time and date at job start Tue Mar 31 2020 05:47:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.31465 * 125.49924 * 2 1 4 4 N 1.39933 * 108.84141 * 180.02562 * 3 2 1 5 5 C 1.36567 * 132.58526 * 180.02562 * 4 3 2 6 6 C 1.35504 * 119.11800 * 179.97438 * 5 4 3 7 7 S 1.76199 * 120.26698 * 180.02562 * 6 5 4 8 8 O 1.42106 * 106.40481 * 203.54408 * 7 6 5 9 9 O 1.42100 * 106.40287 * 336.46041 * 7 6 5 10 10 N 1.65599 * 107.21905 * 90.00235 * 7 6 5 11 11 C 1.46496 * 120.00141 * 64.99953 * 10 7 6 12 12 C 1.50700 * 109.47699 * 165.00247 * 11 10 7 13 13 H 1.08005 * 119.99379 * 359.97438 * 12 11 10 14 14 C 1.37865 * 120.00451 * 180.02562 * 12 11 10 15 15 N 1.31519 * 120.00091 * 359.97438 * 14 12 11 16 16 Si 1.86803 * 120.00153 * 179.97438 * 14 12 11 17 17 H 1.48506 * 109.46832 * 60.00040 * 16 14 12 18 18 H 1.48494 * 109.47089 * 179.97438 * 16 14 12 19 19 H 1.48500 * 109.47501 * 300.00280 * 16 14 12 20 20 C 1.40267 * 119.46436 * 0.27703 * 6 5 4 21 21 N 1.31203 * 120.29821 * 359.44092 * 20 6 5 22 22 C 1.33983 * 120.81020 * 0.54995 * 21 20 6 23 23 C 1.38690 * 125.50137 * 180.02562 * 2 1 3 24 24 Cl 1.73600 * 126.17578 * 359.95851 * 23 2 1 25 25 H 1.08995 * 109.47119 * 269.95839 * 1 2 3 26 26 H 1.09001 * 109.46653 * 29.96121 * 1 2 3 27 27 H 1.09000 * 109.46622 * 149.95494 * 1 2 3 28 28 H 1.08004 * 120.44121 * 359.93053 * 5 4 3 29 29 H 0.97005 * 120.00149 * 245.00298 * 10 7 6 30 30 H 1.09005 * 109.46955 * 285.00201 * 11 10 7 31 31 H 1.09003 * 109.46880 * 45.00097 * 11 10 7 32 32 H 0.96998 * 119.99927 * 179.97438 * 15 14 12 33 33 H 1.08005 * 119.85079 * 179.72131 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2704 1.0703 0.0000 4 7 3.6110 0.6692 -0.0006 5 6 4.7846 1.3676 -0.0004 6 6 5.9566 0.6875 -0.0006 7 16 7.4885 1.5580 0.0003 8 8 8.4550 0.6701 -0.5446 9 8 7.2201 2.8432 -0.5433 10 7 7.9144 1.7991 1.5824 11 6 8.2256 0.6529 2.4400 12 6 8.9251 1.1326 3.6856 13 1 9.1189 2.1860 3.8243 14 6 9.3186 0.2268 4.6476 15 7 9.0830 -1.0561 4.4785 16 14 10.1863 0.8214 6.1913 17 1 9.3020 1.7624 6.9248 18 1 10.5015 -0.3404 7.0606 19 1 11.4444 1.5153 5.8159 20 6 5.9405 -0.7151 -0.0069 21 7 4.8001 -1.3639 -0.0016 22 6 3.6346 -0.7032 -0.0010 23 6 2.3124 -1.1291 -0.0005 24 17 1.7667 -2.7771 -0.0002 25 1 -0.3633 -0.0007 1.0276 26 1 -0.3633 0.8904 -0.5132 27 1 -0.3632 -0.8896 -0.5145 28 1 4.7787 2.4476 -0.0008 29 1 7.9578 2.6992 1.9412 30 1 7.3019 0.1437 2.7152 31 1 8.8748 -0.0379 1.9019 32 1 9.3602 -1.6934 5.1551 33 1 6.8710 -1.2634 -0.0117 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000331119271.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:47:29 Heat of formation + Delta-G solvation = 35.089974 kcal Electronic energy + Delta-G solvation = -23155.338914 eV Core-core repulsion = 19371.402247 eV Total energy + Delta-G solvation = -3783.936667 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 330.034 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.69319 -38.57656 -37.10462 -36.58934 -35.69504 -34.85483 -34.40641 -32.59229 -32.29752 -29.56999 -28.66191 -26.90991 -24.93027 -23.52176 -22.66929 -21.25678 -19.40471 -18.75618 -18.02438 -17.54056 -17.29460 -16.60990 -16.07970 -15.82352 -15.49597 -14.69453 -14.58670 -13.98966 -13.92994 -13.70307 -13.64452 -12.98234 -12.84828 -12.58512 -12.43861 -12.30652 -12.05200 -11.99626 -11.94052 -11.82813 -11.55115 -11.13436 -10.99929 -10.92390 -10.86960 -10.24881 -10.08642 -9.90491 -9.59310 -9.09568 -8.41959 -8.18474 -6.27899 -4.33993 0.02338 0.29490 0.54198 1.37081 1.98318 2.28848 2.92454 3.20938 3.26389 3.26986 3.36552 3.51283 3.68982 3.87589 4.07683 4.18901 4.26732 4.57073 4.74211 4.79918 5.07690 5.10665 5.20334 5.23120 5.38743 5.63171 5.81749 5.97327 6.18169 6.92472 7.08574 7.14414 7.27313 7.55375 7.68438 8.01156 8.69255 9.32122 10.82164 Molecular weight = 330.03amu Principal moments of inertia in cm(-1) A = 0.013586 B = 0.003682 C = 0.003255 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2060.488146 B = 7602.129804 C = 8600.462869 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.145 3.855 3 N -0.299 5.299 4 N -0.319 5.319 5 C 0.297 3.703 6 C -0.776 4.776 7 S 2.706 3.294 8 O -0.941 6.941 9 O -0.970 6.970 10 N -1.095 6.095 11 C 0.243 3.757 12 C -0.535 4.535 13 H 0.067 0.933 14 C 0.064 3.936 15 N -0.888 5.888 16 Si 0.904 3.096 17 H -0.276 1.276 18 H -0.285 1.285 19 H -0.274 1.274 20 C 0.267 3.733 21 N -0.461 5.461 22 C 0.294 3.706 23 C -0.190 4.190 24 Cl -0.016 7.016 25 H 0.092 0.908 26 H 0.085 0.915 27 H 0.089 0.911 28 H 0.202 0.798 29 H 0.415 0.585 30 H 0.021 0.979 31 H 0.044 0.956 32 H 0.268 0.732 33 H 0.202 0.798 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.946 1.925 -8.880 16.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.016 4.016 3 N -0.123 5.123 4 N -0.088 5.088 5 C 0.159 3.841 6 C -0.863 4.863 7 S 2.786 3.214 8 O -0.931 6.931 9 O -0.959 6.959 10 N -0.859 5.859 11 C 0.120 3.880 12 C -0.574 4.574 13 H 0.085 0.915 14 C -0.140 4.140 15 N -0.525 5.525 16 Si 0.731 3.269 17 H -0.201 1.201 18 H -0.210 1.210 19 H -0.199 1.199 20 C 0.082 3.918 21 N -0.172 5.172 22 C 0.066 3.934 23 C -0.229 4.229 24 Cl 0.013 6.987 25 H 0.110 0.890 26 H 0.104 0.896 27 H 0.108 0.892 28 H 0.219 0.781 29 H 0.250 0.750 30 H 0.039 0.961 31 H 0.062 0.938 32 H 0.078 0.922 33 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges -13.963 1.949 -9.606 17.060 hybrid contribution -0.034 0.029 1.466 1.467 sum -13.997 1.978 -8.140 16.312 Atomic orbital electron populations 1.20409 0.84452 1.04550 1.04377 1.22337 0.97892 0.88200 0.93213 1.78026 0.82023 1.20297 1.31920 1.46924 1.06602 1.07455 1.47842 1.21853 0.80047 0.99597 0.82627 1.32431 1.21067 1.09371 1.23466 1.01918 0.72877 0.72991 0.73593 1.93611 1.55216 1.67063 1.77217 1.93560 1.85651 1.38811 1.77908 1.55494 1.82759 1.17436 1.30253 1.19189 0.96317 0.82513 0.90004 1.21097 1.39347 0.94237 1.02757 0.91492 1.24963 0.95654 0.94763 0.98653 1.69910 1.45984 1.01203 1.35424 0.86457 0.80036 0.78265 0.82095 1.20099 1.21043 1.19903 1.23216 0.97183 0.88886 0.82532 1.68384 0.95725 1.36011 1.17062 1.20307 0.94373 0.80536 0.98136 1.19753 0.88788 0.88461 1.25913 1.98323 1.88598 1.14180 1.97633 0.88982 0.89615 0.89222 0.78140 0.75011 0.96106 0.93810 0.92206 0.78166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.61 10.28 36.01 0.37 -0.24 16 2 C 0.14 1.81 7.16 -82.58 -0.59 1.22 16 3 N -0.30 -4.22 12.66 33.54 0.42 -3.80 16 4 N -0.32 -4.81 3.91 -12.16 -0.05 -4.86 16 5 C 0.30 4.00 10.78 -16.42 -0.18 3.82 16 6 C -0.78 -11.14 5.93 -39.80 -0.24 -11.37 16 7 S 2.71 41.67 5.74 -107.50 -0.62 41.05 16 8 O -0.94 -16.98 16.80 -57.17 -0.96 -17.94 16 9 O -0.97 -15.32 17.28 -57.17 -0.99 -16.31 16 10 N -1.10 -18.95 5.99 -11.66 -0.07 -19.02 16 11 C 0.24 5.40 5.98 -5.20 -0.03 5.37 16 12 C -0.53 -13.37 9.27 -34.44 -0.32 -13.69 16 13 H 0.07 1.59 7.65 -52.48 -0.40 1.18 16 14 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 15 N -0.89 -24.24 13.29 55.43 0.74 -23.50 16 16 Si 0.90 19.97 29.54 -169.99 -5.02 14.95 16 17 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 18 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 19 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 20 C 0.27 4.06 10.77 -17.06 -0.18 3.87 16 21 N -0.46 -7.60 10.48 -12.18 -0.13 -7.73 16 22 C 0.29 4.73 7.92 -155.41 -1.23 3.50 16 23 C -0.19 -2.71 6.73 -39.17 -0.26 -2.98 16 24 Cl -0.02 -0.20 28.94 -51.86 -1.50 -1.70 16 25 H 0.09 0.60 8.14 -51.93 -0.42 0.18 16 26 H 0.09 0.55 8.14 -51.93 -0.42 0.13 16 27 H 0.09 0.58 7.94 -51.93 -0.41 0.17 16 28 H 0.20 2.05 7.61 -52.48 -0.40 1.65 16 29 H 0.41 6.43 8.54 -34.47 -0.29 6.13 16 30 H 0.02 0.48 8.14 -51.93 -0.42 0.06 16 31 H 0.04 1.04 7.75 -51.93 -0.40 0.64 16 32 H 0.27 6.97 8.31 -40.82 -0.34 6.63 16 33 H 0.20 2.71 7.67 -52.48 -0.40 2.31 16 LS Contribution 326.11 15.07 4.91 4.91 Total: -1.00 -32.10 326.11 -8.73 -40.83 By element: Atomic # 1 Polarization: 4.76 SS G_CDS: -2.72 Total: 2.04 kcal Atomic # 6 Polarization: -6.18 SS G_CDS: -2.76 Total: -8.94 kcal Atomic # 7 Polarization: -59.82 SS G_CDS: 0.92 Total: -58.90 kcal Atomic # 8 Polarization: -32.30 SS G_CDS: -1.95 Total: -34.25 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -5.02 Total: 14.95 kcal Atomic # 16 Polarization: 41.67 SS G_CDS: -0.62 Total: 41.05 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -1.50 Total: -1.70 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -32.10 -8.73 -40.83 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000331119271.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.924 kcal (2) G-P(sol) polarization free energy of solvation -32.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds