Wall clock time and date at job start Tue Mar 31 2020 05:18:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35425 * 119.57382 * 2 1 4 4 C 1.41903 * 117.83670 * 179.97438 * 3 2 1 5 5 O 1.22102 * 121.40817 * 179.97438 * 4 3 2 6 6 C 1.47191 * 117.18393 * 359.97438 * 4 3 2 7 7 C 1.47447 * 120.63299 * 180.02562 * 6 4 3 8 8 O 1.21532 * 119.99513 * 359.97438 * 7 6 4 9 9 O 1.34763 * 120.00239 * 179.72487 * 7 6 4 10 10 C 1.34827 * 116.99969 * 180.27874 * 9 7 6 11 11 H 1.07997 * 120.00107 * 359.97438 * 10 9 7 12 12 C 1.38829 * 119.99966 * 180.02562 * 10 9 7 13 13 N 1.31409 * 119.99883 * 359.97438 * 12 10 9 14 14 Si 1.86800 * 120.00186 * 179.97438 * 12 10 9 15 15 H 1.48505 * 109.47261 * 89.99898 * 14 12 10 16 16 H 1.48501 * 109.47485 * 210.00071 * 14 12 10 17 17 H 1.48504 * 109.46963 * 329.99825 * 14 12 10 18 18 N 1.31745 * 118.73916 * 0.27477 * 6 4 3 19 19 N 1.28188 * 122.07556 * 359.44736 * 18 6 4 20 20 C 1.39894 * 118.34190 * 180.26263 * 19 18 6 21 21 C 1.38925 * 120.06154 * 46.25631 * 20 19 18 22 22 C 1.38078 * 119.93306 * 179.69966 * 21 20 19 23 23 C 1.38410 * 120.06279 * 0.59756 * 22 21 20 24 24 Cl 1.73602 * 119.93705 * 179.70084 * 23 22 21 25 25 C 1.38410 * 120.12219 * 359.67829 * 23 22 21 26 26 C 1.38074 * 120.06306 * 0.02562 * 25 23 22 27 27 H 1.09002 * 109.46955 * 94.33038 * 1 2 3 28 28 H 1.08996 * 109.47332 * 214.32985 * 1 2 3 29 29 H 1.08998 * 109.47464 * 334.33360 * 1 2 3 30 30 H 1.07995 * 121.08002 * 0.02562 * 3 2 1 31 31 H 0.97006 * 119.99715 * 180.02562 * 13 12 10 32 32 H 1.08001 * 120.02891 * 359.97330 * 21 20 19 33 33 H 1.08005 * 119.96629 * 180.27141 * 22 21 20 34 34 H 1.07995 * 119.96547 * 179.97438 * 25 23 22 35 35 H 1.08002 * 120.02648 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1754 1.1778 0.0000 4 6 3.5938 1.1348 0.0006 5 8 4.2614 2.1571 0.0001 6 6 4.2262 -0.1943 0.0017 7 6 5.6946 -0.3276 0.0029 8 8 6.3949 0.6657 0.0025 9 8 6.2602 -1.5508 0.0095 10 6 7.6075 -1.6021 0.0161 11 1 8.1828 -0.6881 0.0155 12 6 8.2553 -2.8300 0.0226 13 7 7.5554 -3.9421 0.0228 14 14 10.1220 -2.9012 0.0310 15 1 10.6105 -2.9159 1.4333 16 1 10.5735 -4.1337 -0.6634 17 1 10.6659 -1.7105 -0.6703 18 7 3.4553 -1.2627 -0.0034 19 7 2.1761 -1.1791 0.0011 20 6 1.4332 -2.3645 0.0008 21 6 1.7710 -3.3978 0.8657 22 6 1.0320 -4.5642 0.8675 23 6 -0.0366 -4.7093 0.0000 24 17 -0.9587 -6.1802 -0.0005 25 6 -0.3718 -3.6836 -0.8669 26 6 0.3598 -2.5126 -0.8687 27 1 -0.3633 -0.0776 -1.0248 28 1 -0.3634 -0.8486 0.5795 29 1 -0.3634 0.9262 0.4451 30 1 1.6461 2.1192 0.0004 31 1 8.0081 -4.8001 0.0278 32 1 2.6080 -3.2871 1.5392 33 1 1.2915 -5.3662 1.5428 34 1 -1.2059 -3.7996 -1.5430 35 1 0.0975 -1.7125 -1.5450 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000012814130.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:11 Heat of formation + Delta-G solvation = -7.402424 kcal Electronic energy + Delta-G solvation = -25394.107383 eV Core-core repulsion = 21385.968448 eV Total energy + Delta-G solvation = -4008.138935 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 334.055 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.21176 -39.59721 -38.72123 -37.82981 -36.75023 -35.07602 -34.69440 -33.17470 -32.20640 -31.55654 -29.61917 -28.51357 -26.13489 -24.96743 -23.56773 -23.06784 -22.09783 -21.02479 -18.71668 -18.46770 -17.63690 -17.22073 -16.65461 -16.32031 -15.83795 -15.29805 -15.01432 -14.72168 -14.43377 -14.33420 -14.12310 -13.96720 -13.87084 -13.46061 -13.30992 -13.25595 -12.96958 -12.57102 -12.38054 -11.93397 -11.75215 -11.66680 -11.27971 -11.25723 -11.11902 -10.54700 -10.44540 -10.04612 -9.89299 -9.50170 -9.44515 -9.30899 -8.80784 -8.62941 -7.96322 -6.49804 -4.09283 0.36327 0.82692 0.87470 1.31486 1.72213 2.03855 3.07657 3.11319 3.16988 3.23440 3.32714 3.68404 4.05939 4.09480 4.16440 4.27553 4.41675 4.50858 4.65012 4.75094 4.87488 4.96241 5.02666 5.11368 5.11818 5.34984 5.40580 5.51192 5.60003 5.74519 5.80140 5.86945 5.93963 6.14509 6.52680 6.79642 7.32974 7.86429 7.93940 8.09948 8.68206 8.97669 9.80932 10.66748 Molecular weight = 334.06amu Principal moments of inertia in cm(-1) A = 0.010142 B = 0.003895 C = 0.002861 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2760.047567 B = 7187.216253 C = 9784.298688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C 0.129 3.871 3 C -0.271 4.271 4 C 0.383 3.617 5 O -0.452 6.452 6 C 0.020 3.980 7 C 0.450 3.550 8 O -0.518 6.518 9 O -0.190 6.190 10 C -0.368 4.368 11 H 0.101 0.899 12 C 0.042 3.958 13 N -0.849 5.849 14 Si 0.946 3.054 15 H -0.271 1.271 16 H -0.277 1.277 17 H -0.264 1.264 18 N -0.166 5.166 19 N -0.277 5.277 20 C 0.133 3.867 21 C -0.076 4.076 22 C -0.092 4.092 23 C -0.030 4.030 24 Cl -0.064 7.064 25 C -0.097 4.097 26 C -0.109 4.109 27 H 0.093 0.907 28 H 0.085 0.915 29 H 0.094 0.906 30 H 0.164 0.836 31 H 0.272 0.728 32 H 0.150 0.850 33 H 0.146 0.854 34 H 0.144 0.856 35 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.400 -3.193 0.145 22.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.020 3.980 3 C -0.297 4.297 4 C 0.264 3.736 5 O -0.327 6.327 6 C -0.156 4.156 7 C 0.295 3.705 8 O -0.411 6.411 9 O -0.095 6.095 10 C -0.445 4.445 11 H 0.118 0.882 12 C -0.164 4.164 13 N -0.485 5.485 14 Si 0.770 3.230 15 H -0.197 1.197 16 H -0.202 1.202 17 H -0.188 1.188 18 N 0.006 4.994 19 N -0.069 5.069 20 C 0.042 3.958 21 C -0.095 4.095 22 C -0.111 4.111 23 C -0.057 4.057 24 Cl -0.035 7.035 25 C -0.116 4.116 26 C -0.129 4.129 27 H 0.111 0.889 28 H 0.104 0.896 29 H 0.113 0.887 30 H 0.181 0.819 31 H 0.082 0.918 32 H 0.168 0.832 33 H 0.164 0.836 34 H 0.162 0.838 35 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -21.803 -3.670 0.140 22.110 hybrid contribution 0.649 0.465 -0.050 0.800 sum -21.154 -3.204 0.091 21.396 Atomic orbital electron populations 1.21365 0.87543 1.05311 1.04208 1.21385 0.96105 0.85928 0.94538 1.22425 0.95233 0.97536 1.14484 1.18823 0.89048 0.88201 0.77545 1.90839 1.66954 1.35192 1.39727 1.24655 0.93621 0.91003 1.06277 1.19362 0.85028 0.83861 0.82263 1.90757 1.61279 1.38657 1.50442 1.83975 1.24086 1.27620 1.73827 1.21457 0.77645 0.94854 1.50516 0.88163 1.25430 1.00984 0.93886 0.96078 1.70005 1.36426 0.97701 1.44343 0.85622 0.80017 0.78414 0.78919 1.19681 1.20195 1.18807 1.71879 0.89629 1.30156 1.07738 1.41638 1.01909 1.04387 1.58948 1.17633 0.93693 0.85876 0.98560 1.21202 0.99348 0.91631 0.97360 1.21024 0.93460 0.97980 0.98624 1.21063 0.95863 0.89157 0.99646 1.98388 1.72776 1.34426 1.97908 1.20845 1.00722 0.91311 0.98755 1.21192 0.95547 0.98604 0.97591 0.88909 0.89582 0.88733 0.81878 0.91824 0.83238 0.83609 0.83794 0.83719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.81 8.19 36.01 0.29 -0.52 16 2 C 0.13 1.55 6.50 -81.94 -0.53 1.02 16 3 C -0.27 -3.91 9.72 -39.18 -0.38 -4.29 16 4 C 0.38 7.90 6.99 -34.55 -0.24 7.66 16 5 O -0.45 -10.97 16.43 -15.17 -0.25 -11.22 16 6 C 0.02 0.46 7.04 -80.52 -0.57 -0.11 16 7 C 0.45 12.47 7.89 34.48 0.27 12.74 16 8 O -0.52 -15.59 14.82 -26.07 -0.39 -15.98 16 9 O -0.19 -5.68 9.58 -21.65 -0.21 -5.88 16 10 C -0.37 -11.03 9.65 30.95 0.30 -10.73 16 11 H 0.10 3.02 6.86 -52.49 -0.36 2.66 16 12 C 0.04 1.18 5.50 -17.51 -0.10 1.08 16 13 N -0.85 -24.47 13.67 55.49 0.76 -23.71 16 14 Si 0.95 21.16 29.55 -169.99 -5.02 16.13 16 15 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 16 H -0.28 -5.92 7.11 56.52 0.40 -5.51 16 17 H -0.26 -5.84 7.11 56.52 0.40 -5.43 16 18 N -0.17 -3.28 10.27 34.57 0.35 -2.93 16 19 N -0.28 -4.08 3.40 -6.91 -0.02 -4.11 16 20 C 0.13 1.58 5.11 -83.67 -0.43 1.15 16 21 C -0.08 -0.90 9.60 -39.39 -0.38 -1.28 16 22 C -0.09 -0.90 9.82 -39.58 -0.39 -1.29 16 23 C -0.03 -0.27 6.32 -39.45 -0.25 -0.52 16 24 Cl -0.06 -0.53 28.95 -51.86 -1.50 -2.03 16 25 C -0.10 -0.74 9.82 -39.58 -0.39 -1.12 16 26 C -0.11 -0.93 7.53 -39.39 -0.30 -1.23 16 27 H 0.09 0.41 6.68 -51.93 -0.35 0.06 16 28 H 0.09 0.50 6.35 -51.93 -0.33 0.17 16 29 H 0.09 0.45 8.04 -51.93 -0.42 0.03 16 30 H 0.16 1.83 8.06 -52.49 -0.42 1.41 16 31 H 0.27 7.13 8.31 -40.82 -0.34 6.79 16 32 H 0.15 1.98 8.01 -52.49 -0.42 1.56 16 33 H 0.15 1.21 8.06 -52.48 -0.42 0.79 16 34 H 0.14 0.74 8.06 -52.49 -0.42 0.31 16 35 H 0.15 0.92 5.85 -52.49 -0.31 0.61 16 LS Contribution 331.95 15.07 5.00 5.00 Total: -1.00 -37.24 331.95 -6.94 -44.18 By element: Atomic # 1 Polarization: 0.56 SS G_CDS: -2.59 Total: -2.03 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: -3.08 Total: 2.57 kcal Atomic # 7 Polarization: -31.83 SS G_CDS: 1.09 Total: -30.74 kcal Atomic # 8 Polarization: -32.24 SS G_CDS: -0.84 Total: -33.09 kcal Atomic # 14 Polarization: 21.16 SS G_CDS: -5.02 Total: 16.13 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.50 Total: -2.03 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -37.24 -6.94 -44.18 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000012814130.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.782 kcal (2) G-P(sol) polarization free energy of solvation -37.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds