Wall clock time and date at job start Tue Mar 31 2020 05:27:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 114.00343 * 2 1 4 4 C 1.53001 * 109.47099 * 180.02562 * 3 2 1 5 5 N 1.46896 * 109.46917 * 67.20130 * 4 3 2 6 6 C 1.46906 * 111.00031 * 290.36772 * 5 4 3 7 7 C 1.50702 * 109.46640 * 299.81111 * 6 5 4 8 8 H 1.07997 * 120.00281 * 354.95814 * 7 6 5 9 9 C 1.37882 * 119.99734 * 174.96650 * 7 6 5 10 10 N 1.31516 * 120.00016 * 179.97438 * 9 7 6 11 11 Si 1.86796 * 120.00041 * 359.97438 * 9 7 6 12 12 H 1.48503 * 109.47099 * 90.00271 * 11 9 7 13 13 H 1.48501 * 109.47206 * 210.00256 * 11 9 7 14 14 H 1.48505 * 109.47157 * 330.00435 * 11 9 7 15 15 C 1.46896 * 111.00526 * 54.32007 * 5 4 3 16 16 C 1.50707 * 109.46960 * 66.04401 * 15 5 4 17 17 C 1.36128 * 120.10862 * 260.00321 * 16 15 5 18 18 C 1.39271 * 121.08314 * 180.27783 * 17 16 15 19 19 C 1.36312 * 120.85222 * 359.45270 * 18 17 16 20 20 Cl 1.73592 * 120.20802 * 180.25808 * 19 18 17 21 21 C 1.40502 * 119.58135 * 0.56084 * 19 18 17 22 22 C 1.40737 * 121.38089 * 179.72321 * 21 19 18 23 23 C 1.36585 * 118.15443 * 179.97438 * 22 21 19 24 24 C 1.39319 * 119.94000 * 0.02562 * 23 22 21 25 25 N 1.31093 * 121.75049 * 359.97326 * 24 23 22 26 26 C 1.33699 * 121.31384 * 0.02562 * 25 24 23 27 27 H 1.09001 * 109.46887 * 300.00522 * 1 2 3 28 28 H 1.09004 * 109.47342 * 59.99879 * 1 2 3 29 29 H 1.08994 * 109.47571 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47166 * 60.00049 * 3 2 1 31 31 H 1.08997 * 109.46705 * 300.00336 * 3 2 1 32 32 H 1.08999 * 109.46837 * 307.19682 * 4 3 2 33 33 H 1.09003 * 109.46790 * 187.19828 * 4 3 2 34 34 H 1.08993 * 109.47403 * 59.80567 * 6 5 4 35 35 H 1.08999 * 109.47354 * 179.81617 * 6 5 4 36 36 H 0.96999 * 119.99886 * 179.97438 * 10 9 7 37 37 H 1.09007 * 109.47021 * 306.04649 * 15 5 4 38 38 H 1.08999 * 109.47339 * 186.04699 * 15 5 4 39 39 H 1.07996 * 119.45864 * 359.97438 * 17 16 15 40 40 H 1.08003 * 119.57655 * 179.74120 * 18 17 16 41 41 H 1.08000 * 120.92191 * 0.02562 * 22 21 19 42 42 H 1.08004 * 120.03444 * 179.97438 * 23 22 21 43 43 H 1.08003 * 119.13030 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 -0.0006 5 7 3.9807 0.6111 -1.2777 6 6 3.5932 -0.8020 -1.3838 7 6 4.2269 -1.5822 -0.2610 8 1 4.9189 -1.0964 0.4109 9 6 3.9235 -2.9165 -0.0917 10 7 4.4769 -3.5976 0.8878 11 14 2.7263 -3.7568 -1.2536 12 1 3.4714 -4.3281 -2.4041 13 1 2.0182 -4.8452 -0.5328 14 1 1.7373 -2.7652 -1.7476 15 6 3.4612 1.3859 -2.4124 16 6 4.0752 2.7622 -2.4040 17 6 3.3760 3.8189 -1.9064 18 6 3.9215 5.1003 -1.8939 19 6 5.1777 5.3299 -2.3706 20 17 5.8437 6.9327 -2.3408 21 6 5.9276 4.2623 -2.8920 22 6 7.2258 4.4575 -3.3993 23 6 7.8958 3.3731 -3.8899 24 6 7.2906 2.1182 -3.8786 25 7 6.0812 1.9399 -3.4053 26 6 5.3713 2.9591 -2.9106 27 1 -0.3633 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 1.6887 1.8464 0.8900 31 1 1.6886 1.8463 -0.8900 32 1 3.8489 0.5363 0.8177 33 1 3.9783 2.1722 0.1281 34 1 2.5086 -0.8872 -1.3184 35 1 3.9321 -1.2009 -2.3399 36 1 4.2631 -4.5362 1.0071 37 1 2.3777 1.4710 -2.3287 38 1 3.7150 0.8805 -3.3442 39 1 2.3800 3.6619 -1.5195 40 1 3.3435 5.9219 -1.4972 41 1 7.6799 5.4374 -3.3999 42 1 8.8936 3.4883 -4.2869 43 1 7.8322 1.2698 -4.2701 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072689322.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:57 Heat of formation + Delta-G solvation = 27.645811 kcal Electronic energy + Delta-G solvation = -26895.761931 eV Core-core repulsion = 23160.808991 eV Total energy + Delta-G solvation = -3734.952941 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.119 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.96866 -38.48315 -37.42828 -36.68514 -35.65786 -33.45389 -32.27780 -30.72623 -30.52942 -29.25925 -27.36212 -25.99548 -24.65741 -24.14475 -23.69772 -22.45185 -20.96129 -19.34493 -18.42290 -17.15084 -17.09344 -16.68828 -16.10652 -15.91180 -15.03244 -14.82169 -14.67847 -14.45399 -14.26951 -13.99655 -13.90608 -13.52948 -13.26955 -13.15320 -12.78316 -12.38267 -12.11596 -12.08932 -11.85155 -11.55699 -11.37104 -11.28700 -11.17987 -11.00641 -10.91858 -10.61394 -10.35725 -10.24803 -10.15083 -9.70134 -9.36804 -9.09171 -9.04659 -8.87447 -8.35674 -8.13321 -7.12291 -5.85747 -3.78835 0.26404 0.73526 1.86567 1.88670 2.80477 3.42068 3.48146 3.53655 4.02918 4.29637 4.29891 4.53045 4.61066 4.62270 4.64722 4.87926 4.91945 5.11092 5.17297 5.32070 5.41707 5.47585 5.50245 5.58234 5.63077 5.66350 5.73102 5.77228 5.82807 5.91867 5.99069 6.03078 6.11291 6.14057 6.24059 6.34573 6.47198 6.73413 6.79434 7.12116 7.43367 7.69778 7.79364 8.00677 8.05451 8.21171 8.84890 9.21104 9.78300 11.28072 Molecular weight = 334.12amu Principal moments of inertia in cm(-1) A = 0.015149 B = 0.003773 C = 0.003237 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1847.863493 B = 7419.683819 C = 8647.655995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.349 6.349 3 C 0.023 3.977 4 C 0.058 3.942 5 N -0.505 5.505 6 C 0.152 3.848 7 C -0.487 4.487 8 H 0.075 0.925 9 C 0.069 3.931 10 N -0.910 5.910 11 Si 0.872 3.128 12 H -0.281 1.281 13 H -0.291 1.291 14 H -0.263 1.263 15 C 0.088 3.912 16 C -0.020 4.020 17 C -0.110 4.110 18 C -0.095 4.095 19 C -0.028 4.028 20 Cl -0.070 7.070 21 C -0.097 4.097 22 C -0.066 4.066 23 C -0.168 4.168 24 C 0.129 3.871 25 N -0.434 5.434 26 C 0.153 3.847 27 H 0.033 0.967 28 H 0.030 0.970 29 H 0.080 0.920 30 H 0.040 0.960 31 H 0.041 0.959 32 H 0.102 0.898 33 H 0.067 0.933 34 H 0.030 0.970 35 H 0.016 0.984 36 H 0.259 0.741 37 H 0.039 0.961 38 H 0.087 0.913 39 H 0.134 0.866 40 H 0.135 0.865 41 H 0.138 0.862 42 H 0.137 0.863 43 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.832 19.973 -8.608 21.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.267 6.267 3 C -0.056 4.056 4 C -0.070 4.070 5 N -0.228 5.228 6 C 0.027 3.973 7 C -0.525 4.525 8 H 0.093 0.907 9 C -0.131 4.131 10 N -0.550 5.550 11 Si 0.701 3.299 12 H -0.208 1.208 13 H -0.218 1.218 14 H -0.188 1.188 15 C -0.040 4.040 16 C -0.021 4.021 17 C -0.131 4.131 18 C -0.113 4.113 19 C -0.055 4.055 20 Cl -0.041 7.041 21 C -0.100 4.100 22 C -0.092 4.092 23 C -0.188 4.188 24 C -0.044 4.044 25 N -0.141 5.141 26 C 0.031 3.969 27 H 0.051 0.949 28 H 0.048 0.952 29 H 0.098 0.902 30 H 0.058 0.942 31 H 0.059 0.941 32 H 0.121 0.879 33 H 0.085 0.915 34 H 0.047 0.953 35 H 0.034 0.966 36 H 0.069 0.931 37 H 0.057 0.943 38 H 0.105 0.895 39 H 0.152 0.848 40 H 0.153 0.847 41 H 0.156 0.844 42 H 0.155 0.845 43 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -0.618 18.942 -8.504 20.773 hybrid contribution -1.195 0.709 -0.429 1.454 sum -1.812 19.651 -8.933 21.662 Atomic orbital electron populations 1.22709 0.83618 1.02215 0.98681 1.88412 1.17427 1.26270 1.94632 1.23416 0.97647 0.85752 0.98747 1.22282 0.89157 0.99992 0.95617 1.62144 1.57820 1.03944 0.98856 1.20472 0.96407 0.83059 0.97379 1.20916 1.25256 0.94139 1.12236 0.90707 1.24788 0.95860 0.97244 0.95172 1.69903 1.44670 1.08889 1.31554 0.86894 0.82383 0.79314 0.81345 1.20752 1.21777 1.18807 1.21048 0.95478 0.89730 0.97704 1.19838 0.91660 0.96522 0.94074 1.20732 1.00780 0.91240 1.00302 1.20761 0.93651 0.97901 0.99023 1.20530 0.95005 0.85376 1.04637 1.98349 1.85939 1.22605 1.97247 1.18591 0.95798 0.93514 1.02055 1.21421 0.92709 0.99904 0.95137 1.21938 1.01532 0.93882 1.01404 1.23116 0.91186 0.96516 0.93547 1.68237 1.07015 1.31397 1.07447 1.18590 0.94220 0.87280 0.96839 0.94855 0.95157 0.90183 0.94200 0.94103 0.87943 0.91483 0.95290 0.96593 0.93098 0.94347 0.89482 0.84804 0.84716 0.84411 0.84504 0.82170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.38 11.01 101.05 1.11 1.49 16 2 O -0.35 -6.94 7.57 -35.23 -0.27 -7.20 16 3 C 0.02 0.38 5.69 37.16 0.21 0.59 16 4 C 0.06 1.11 5.31 -3.83 -0.02 1.09 16 5 N -0.51 -10.54 4.74 -237.51 -1.13 -11.66 16 6 C 0.15 3.73 3.37 -4.97 -0.02 3.72 16 7 C -0.49 -14.01 8.77 -34.44 -0.30 -14.31 16 8 H 0.07 2.36 7.21 -52.49 -0.38 1.98 16 9 C 0.07 2.05 5.47 -17.82 -0.10 1.95 16 10 N -0.91 -28.58 13.96 55.43 0.77 -27.80 16 11 Si 0.87 22.29 27.57 -169.99 -4.69 17.61 16 12 H -0.28 -7.11 7.11 56.52 0.40 -6.71 16 13 H -0.29 -7.42 7.11 56.52 0.40 -7.02 16 14 H -0.26 -6.46 6.40 56.52 0.36 -6.10 16 15 C 0.09 1.53 4.44 -4.97 -0.02 1.51 16 16 C -0.02 -0.30 4.60 -104.51 -0.48 -0.78 16 17 C -0.11 -1.35 8.70 -39.96 -0.35 -1.70 16 18 C -0.09 -1.05 9.73 -39.89 -0.39 -1.43 16 19 C -0.03 -0.33 6.32 -39.42 -0.25 -0.58 16 20 Cl -0.07 -0.71 27.56 -51.86 -1.43 -2.14 16 21 C -0.10 -1.30 5.74 -106.78 -0.61 -1.91 16 22 C -0.07 -0.74 9.53 -39.24 -0.37 -1.12 16 23 C -0.17 -1.75 10.03 -39.78 -0.40 -2.15 16 24 C 0.13 1.65 11.15 -17.46 -0.19 1.46 16 25 N -0.43 -7.12 9.60 -10.98 -0.11 -7.22 16 26 C 0.15 2.39 6.58 -84.86 -0.56 1.83 16 27 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.03 0.40 8.14 -51.93 -0.42 -0.02 16 29 H 0.08 1.22 8.14 -51.93 -0.42 0.80 16 30 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 31 H 0.04 0.60 4.41 -51.93 -0.23 0.37 16 32 H 0.10 2.31 6.33 -51.93 -0.33 1.99 16 33 H 0.07 1.15 7.00 -51.93 -0.36 0.78 16 34 H 0.03 0.73 4.00 -51.93 -0.21 0.53 16 35 H 0.02 0.41 7.73 -51.93 -0.40 0.01 16 36 H 0.26 7.69 8.31 -40.82 -0.34 7.35 16 37 H 0.04 0.62 5.55 -51.93 -0.29 0.34 16 38 H 0.09 1.59 7.74 -51.93 -0.40 1.19 16 39 H 0.13 1.40 6.69 -52.49 -0.35 1.05 16 40 H 0.13 1.14 8.06 -52.48 -0.42 0.72 16 41 H 0.14 1.27 7.06 -52.49 -0.37 0.90 16 42 H 0.14 0.97 8.06 -52.48 -0.42 0.54 16 43 H 0.16 1.64 8.06 -52.48 -0.42 1.21 16 LS Contribution 356.83 15.07 5.38 5.38 Total: -1.00 -33.64 356.83 -9.66 -43.30 By element: Atomic # 1 Polarization: 5.54 SS G_CDS: -5.45 Total: 0.09 kcal Atomic # 6 Polarization: -7.60 SS G_CDS: -2.74 Total: -10.34 kcal Atomic # 7 Polarization: -46.23 SS G_CDS: -0.46 Total: -46.69 kcal Atomic # 8 Polarization: -6.94 SS G_CDS: -0.27 Total: -7.20 kcal Atomic # 14 Polarization: 22.29 SS G_CDS: -4.69 Total: 17.61 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.43 Total: -2.14 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -33.64 -9.66 -43.30 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072689322.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.946 kcal (2) G-P(sol) polarization free energy of solvation -33.642 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.300 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.646 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds