Wall clock time and date at job start Tue Mar 31 2020 05:55:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30056 * 126.15980 * 2 1 4 4 N 1.39760 * 110.32900 * 180.02562 * 3 2 1 5 5 C 1.46501 * 125.35222 * 179.97438 * 4 3 2 6 6 C 1.50702 * 109.47320 * 270.00449 * 5 4 3 7 7 H 1.07993 * 120.00039 * 359.97438 * 6 5 4 8 8 C 1.37875 * 120.00094 * 179.97438 * 6 5 4 9 9 N 1.31521 * 119.99896 * 359.97438 * 8 6 5 10 10 Si 1.86797 * 120.00184 * 179.97438 * 8 6 5 11 11 H 1.48501 * 109.47203 * 90.00022 * 10 8 6 12 12 H 1.48499 * 109.47366 * 209.99989 * 10 8 6 13 13 H 1.48503 * 109.47038 * 330.00157 * 10 8 6 14 14 C 1.37171 * 109.30203 * 0.02562 * 4 3 2 15 15 N 1.32087 * 132.88665 * 179.97438 * 14 4 3 16 16 C 1.33405 * 121.70443 * 179.97438 * 15 14 4 17 17 C 1.40819 * 120.56464 * 179.71940 * 16 15 14 18 18 C 1.36068 * 119.82703 * 179.78696 * 17 16 15 19 19 Cl 1.73607 * 119.43574 * 180.25906 * 18 17 16 20 20 C 1.39611 * 121.12409 * 0.47703 * 18 17 16 21 21 C 1.35979 * 120.84335 * 359.78116 * 20 18 17 22 22 C 1.40704 * 119.65378 * 359.97438 * 21 20 18 23 23 C 1.40346 * 121.03734 * 179.97438 * 22 21 20 24 24 Cl 1.73596 * 121.08695 * 0.04577 * 23 22 21 25 25 C 1.39168 * 117.82712 * 180.02562 * 23 22 21 26 26 H 1.08996 * 109.47860 * 269.97982 * 1 2 3 27 27 H 1.09006 * 109.46743 * 29.98325 * 1 2 3 28 28 H 1.09003 * 109.47193 * 149.97563 * 1 2 3 29 29 H 1.08999 * 109.47321 * 30.00265 * 5 4 3 30 30 H 1.08997 * 109.47186 * 150.00185 * 5 4 3 31 31 H 0.97000 * 120.00031 * 180.02562 * 9 8 6 32 32 H 1.08006 * 120.08414 * 0.25512 * 17 16 15 33 33 H 1.08001 * 119.58114 * 179.76184 * 20 18 17 34 34 H 1.08003 * 120.17125 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2744 1.0500 0.0000 4 7 3.6190 0.6688 -0.0006 5 6 4.7604 1.5871 -0.0013 6 6 5.1511 1.9019 -1.4223 7 1 4.6042 1.4616 -2.2429 8 6 6.2068 2.7520 -1.6749 9 7 6.8726 3.2886 -0.6756 10 14 6.6915 3.1416 -3.4363 11 1 5.9418 4.3352 -3.9036 12 1 8.1494 3.4168 -3.4992 13 1 6.3686 1.9823 -4.3065 14 6 3.7020 -0.7004 -0.0016 15 7 4.7225 -1.5391 -0.0028 16 6 4.5435 -2.8611 -0.0031 17 6 5.6489 -3.7334 -0.0104 18 6 5.4490 -5.0793 -0.0061 19 17 6.8193 -6.1453 -0.0084 20 6 4.1609 -5.6175 -0.0046 21 6 3.0675 -4.8091 -0.0028 22 6 3.2347 -3.4120 -0.0020 23 6 2.1268 -2.5506 -0.0007 24 17 0.5066 -3.1741 0.0012 25 6 2.3693 -1.1802 -0.0005 26 1 -0.3635 -0.0004 1.0276 27 1 -0.3633 0.8902 -0.5136 28 1 -0.3634 -0.8898 -0.5142 29 1 4.4859 2.5084 0.5125 30 1 5.6016 1.1215 0.5122 31 1 7.6151 3.8869 -0.8533 32 1 6.6529 -3.3351 -0.0117 33 1 4.0310 -6.6897 -0.0051 34 1 2.0759 -5.2371 -0.0020 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000255190122.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:55:37 Heat of formation + Delta-G solvation = 101.636582 kcal Electronic energy + Delta-G solvation = -23074.101774 eV Core-core repulsion = 19445.974378 eV Total energy + Delta-G solvation = -3628.127395 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 335.029 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.45180 -39.52380 -37.18253 -36.84844 -35.58725 -34.26341 -32.90810 -32.24931 -29.87228 -29.54870 -29.17560 -26.33097 -24.46247 -23.53122 -22.48964 -21.89377 -19.52088 -18.82191 -17.77137 -16.82404 -16.46692 -15.65189 -15.31003 -15.06884 -15.01330 -14.53228 -14.24387 -13.94377 -13.70025 -13.15966 -13.09597 -12.88693 -12.66663 -12.34013 -12.27906 -12.03690 -11.85224 -11.74505 -11.21276 -11.08681 -11.04365 -10.92499 -10.81181 -10.50147 -10.30926 -10.11290 -9.70414 -9.30368 -8.97100 -8.63530 -8.44304 -7.43238 -6.24906 -4.32294 -0.04722 0.82978 1.60487 1.68072 1.93268 2.65936 2.74345 2.81152 3.22119 3.28080 3.33385 4.01771 4.21583 4.30021 4.33884 4.46851 4.66064 4.76130 4.94325 5.09951 5.10383 5.16775 5.40316 5.43785 5.62033 5.70979 5.76072 5.88349 5.99965 6.11763 6.18871 6.35445 6.57200 6.96492 7.00333 7.36521 7.69840 7.86167 7.90957 8.24493 8.70101 9.33139 10.82682 Molecular weight = 335.03amu Principal moments of inertia in cm(-1) A = 0.009170 B = 0.004607 C = 0.003257 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3052.587044 B = 6076.210820 C = 8595.440175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.079 3.921 3 N -0.204 5.204 4 N -0.357 5.357 5 C 0.267 3.733 6 C -0.536 4.536 7 H 0.061 0.939 8 C 0.068 3.932 9 N -0.890 5.890 10 Si 0.906 3.094 11 H -0.277 1.277 12 H -0.282 1.282 13 H -0.273 1.273 14 C 0.367 3.633 15 N -0.482 5.482 16 C 0.216 3.784 17 C -0.091 4.091 18 C -0.001 4.001 19 Cl -0.067 7.067 20 C -0.135 4.135 21 C -0.059 4.059 22 C -0.146 4.146 23 C 0.098 3.902 24 Cl -0.040 7.040 25 C -0.202 4.202 26 H 0.081 0.919 27 H 0.081 0.919 28 H 0.080 0.920 29 H 0.055 0.945 30 H 0.060 0.940 31 H 0.268 0.732 32 H 0.151 0.849 33 H 0.137 0.863 34 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.159 -17.217 2.898 20.200 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.100 4.100 3 N -0.017 5.017 4 N -0.146 5.146 5 C 0.151 3.849 6 C -0.575 4.575 7 H 0.080 0.920 8 C -0.136 4.136 9 N -0.528 5.528 10 Si 0.733 3.267 11 H -0.203 1.203 12 H -0.208 1.208 13 H -0.198 1.198 14 C 0.117 3.883 15 N -0.199 5.199 16 C 0.081 3.919 17 C -0.112 4.112 18 C -0.031 4.031 19 Cl -0.038 7.038 20 C -0.154 4.154 21 C -0.078 4.078 22 C -0.151 4.151 23 C 0.059 3.941 24 Cl -0.011 7.011 25 C -0.212 4.212 26 H 0.099 0.901 27 H 0.099 0.901 28 H 0.099 0.901 29 H 0.073 0.927 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.169 0.831 33 H 0.155 0.845 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -8.959 -15.391 2.953 18.052 hybrid contribution -0.282 -0.892 -0.980 1.355 sum -9.241 -16.283 1.973 18.826 Atomic orbital electron populations 1.20311 0.85507 1.03931 1.03385 1.23406 0.96747 0.87515 1.02363 1.76556 0.88136 1.23081 1.13975 1.49453 1.04339 1.01344 1.59509 1.19806 0.78497 0.87436 0.99198 1.21261 1.16009 1.29025 0.91171 0.92040 1.24887 0.95440 0.95116 0.98120 1.69915 1.21031 1.30858 1.31007 0.86358 0.77785 0.78835 0.83723 1.20293 1.20763 1.19750 1.19011 0.87822 0.87485 0.93973 1.66907 1.32351 1.01221 1.19383 1.18280 0.90363 0.88479 0.94810 1.20603 0.99349 0.90141 1.01058 1.20519 0.88691 0.90685 1.03178 1.98377 1.43454 1.65205 1.96758 1.20584 0.89995 1.00712 1.04097 1.20864 0.99309 0.90878 0.96735 1.18378 0.92272 0.94390 1.10058 1.20707 0.85837 0.90760 0.96797 1.98356 1.19840 1.86884 1.96013 1.20438 0.95485 0.92762 1.12555 0.90062 0.90050 0.90138 0.92702 0.92175 0.92217 0.83147 0.84529 0.84284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.85 10.01 36.00 0.36 -0.49 16 2 C 0.08 1.36 7.44 -80.16 -0.60 0.76 16 3 N -0.20 -4.27 12.37 34.86 0.43 -3.83 16 4 N -0.36 -8.31 3.63 -61.46 -0.22 -8.53 16 5 C 0.27 6.95 6.16 -5.19 -0.03 6.92 16 6 C -0.54 -15.02 9.39 -34.44 -0.32 -15.34 16 7 H 0.06 1.77 7.81 -52.49 -0.41 1.36 16 8 C 0.07 1.88 5.46 -17.82 -0.10 1.79 16 9 N -0.89 -25.41 13.29 55.43 0.74 -24.68 16 10 Si 0.91 21.48 29.54 -169.99 -5.02 16.46 16 11 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 12 H -0.28 -6.55 7.11 56.52 0.40 -6.14 16 13 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 14 C 0.37 7.87 7.95 -156.08 -1.24 6.63 16 15 N -0.48 -10.08 10.33 -10.05 -0.10 -10.18 16 16 C 0.22 3.71 6.61 -84.77 -0.56 3.15 16 17 C -0.09 -1.34 9.71 -39.39 -0.38 -1.72 16 18 C 0.00 -0.01 6.27 -39.85 -0.25 -0.26 16 19 Cl -0.07 -0.73 28.91 -51.86 -1.50 -2.23 16 20 C -0.13 -1.42 9.72 -39.88 -0.39 -1.81 16 21 C -0.06 -0.66 9.45 -39.46 -0.37 -1.04 16 22 C -0.15 -2.15 5.75 -106.73 -0.61 -2.77 16 23 C 0.10 1.45 6.43 -38.44 -0.25 1.21 16 24 Cl -0.04 -0.44 25.41 -51.86 -1.32 -1.76 16 25 C -0.20 -3.61 6.21 -105.07 -0.65 -4.27 16 26 H 0.08 0.80 8.14 -51.93 -0.42 0.38 16 27 H 0.08 0.88 8.14 -51.93 -0.42 0.46 16 28 H 0.08 0.83 6.31 -51.93 -0.33 0.50 16 29 H 0.06 1.47 8.14 -51.93 -0.42 1.05 16 30 H 0.06 1.64 8.14 -51.93 -0.42 1.21 16 31 H 0.27 7.20 8.31 -40.82 -0.34 6.86 16 32 H 0.15 2.17 8.06 -52.48 -0.42 1.74 16 33 H 0.14 1.07 8.06 -52.49 -0.42 0.64 16 34 H 0.14 1.23 7.03 -52.48 -0.37 0.86 16 LS Contribution 329.50 15.07 4.97 4.97 Total: -1.00 -30.03 329.50 -10.21 -40.23 By element: Atomic # 1 Polarization: -0.41 SS G_CDS: -2.78 Total: -3.19 kcal Atomic # 6 Polarization: -1.85 SS G_CDS: -5.40 Total: -7.25 kcal Atomic # 7 Polarization: -48.07 SS G_CDS: 0.84 Total: -47.23 kcal Atomic # 14 Polarization: 21.48 SS G_CDS: -5.02 Total: 16.46 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -2.82 Total: -3.99 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -30.03 -10.21 -40.23 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000255190122.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 141.869 kcal (2) G-P(sol) polarization free energy of solvation -30.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.233 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds