Wall clock time and date at job start Tue Mar 31 2020 05:40:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.52996 * 109.47417 * 246.10512 * 3 2 1 5 5 N 1.46500 * 109.47394 * 180.02562 * 4 3 2 6 6 C 1.46502 * 119.99823 * 264.97684 * 5 4 3 7 7 C 1.50697 * 109.47243 * 270.00106 * 6 5 4 8 8 H 1.07996 * 119.99959 * 359.97438 * 7 6 5 9 9 C 1.37874 * 120.00017 * 180.02562 * 7 6 5 10 10 N 1.31511 * 120.00229 * 180.02562 * 9 7 6 11 11 Si 1.86808 * 120.00028 * 359.97438 * 9 7 6 12 12 H 1.48498 * 109.46714 * 90.00716 * 11 9 7 13 13 H 1.48493 * 109.47134 * 210.00587 * 11 9 7 14 14 H 1.48501 * 109.46806 * 330.00516 * 11 9 7 15 15 C 1.34776 * 119.99740 * 84.97661 * 5 4 3 16 16 O 1.21563 * 119.99556 * 185.53708 * 15 5 4 17 17 C 1.47786 * 120.00202 * 5.54259 * 15 5 4 18 18 C 1.39623 * 120.13205 * 64.24711 * 17 15 5 19 19 C 1.37884 * 119.86703 * 180.23184 * 18 17 15 20 20 C 1.38532 * 120.12835 * 359.47446 * 19 18 17 21 21 Cl 1.73597 * 119.87000 * 180.27726 * 20 19 18 22 22 C 1.38490 * 120.26307 * 0.29931 * 20 19 18 23 23 C 1.37913 * 120.13709 * 359.95495 * 22 20 19 24 24 N 1.48020 * 120.07317 * 180.02562 * 23 22 20 25 25 O 1.21798 * 119.99704 * 355.28209 * 24 23 22 26 26 O 1.21800 * 120.00092 * 175.27735 * 24 23 22 27 27 H 1.08996 * 109.47203 * 126.10137 * 3 2 1 28 28 H 1.09010 * 109.46971 * 6.10450 * 3 2 1 29 29 H 1.08996 * 109.47240 * 59.99648 * 4 3 2 30 30 H 1.08997 * 109.46758 * 300.00125 * 4 3 2 31 31 H 1.08998 * 109.47055 * 30.00322 * 6 5 4 32 32 H 1.09007 * 109.46543 * 149.99965 * 6 5 4 33 33 H 0.97001 * 120.00605 * 179.97438 * 10 9 7 34 34 H 1.08001 * 120.07214 * 359.97438 * 18 17 15 35 35 H 1.07992 * 119.93545 * 179.75013 * 19 18 17 36 36 H 1.08001 * 119.93364 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1178 0.5852 1.3188 5 7 4.5828 0.5864 1.3185 6 6 5.3163 -0.5237 1.9318 7 6 5.5674 -0.2175 3.3858 8 1 5.2162 0.7113 3.8105 9 6 6.2465 -1.1226 4.1736 10 7 6.4652 -0.8556 5.4426 11 14 6.8546 -2.7287 3.4387 12 1 8.2275 -2.5404 2.9050 13 1 6.8715 -3.7785 4.4888 14 1 5.9483 -3.1440 2.3381 15 6 5.2556 1.6087 0.7542 16 8 6.4670 1.5627 0.6638 17 6 4.5208 2.7856 0.2452 18 6 3.8100 3.6029 1.1262 19 6 3.1223 4.6968 0.6448 20 6 3.1448 4.9918 -0.7085 21 17 2.2826 6.3749 -1.3063 22 6 3.8520 4.1875 -1.5865 23 6 4.5394 3.0877 -1.1176 24 7 5.2952 2.2293 -2.0572 25 8 5.2411 2.4429 -3.2551 26 8 5.9714 1.3096 -1.6325 27 1 2.9710 0.6063 -0.8303 28 1 2.9718 -1.0211 -0.1093 29 1 2.7547 -0.0205 2.1491 30 1 2.7540 1.6068 1.4281 31 1 4.7279 -1.4375 1.8492 32 1 6.2687 -0.6571 1.4187 33 1 6.9427 -1.4925 5.9970 34 1 3.7952 3.3764 2.1821 35 1 2.5688 5.3274 1.3247 36 1 3.8656 4.4223 -2.6406 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000002853931.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:40:07 Heat of formation + Delta-G solvation = 25.165956 kcal Electronic energy + Delta-G solvation = -26880.619179 eV Core-core repulsion = 22781.155125 eV Total energy + Delta-G solvation = -4099.464054 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 337.066 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.32247 -40.39587 -38.85674 -37.11913 -37.02728 -36.50317 -35.52803 -32.97577 -32.48081 -31.75848 -31.21037 -28.20322 -26.82431 -24.79123 -23.94429 -23.10192 -22.21970 -20.01089 -18.97981 -18.56383 -17.95877 -17.61083 -17.24654 -16.92564 -16.53706 -16.20866 -16.01448 -15.06942 -14.85533 -14.49141 -14.24329 -14.16931 -13.86100 -13.39684 -13.11887 -12.75272 -12.68781 -12.58439 -12.34397 -12.28164 -11.97193 -11.72281 -11.69702 -11.49638 -11.27473 -11.10471 -11.05036 -11.02233 -10.62024 -10.28303 -10.08412 -9.77583 -9.60908 -9.39667 -8.69425 -8.10892 -6.20197 -4.21356 -0.50640 0.18705 1.02943 1.11298 1.51929 2.49473 2.56713 2.63394 2.94314 3.15941 3.25556 3.30996 3.34876 3.77552 3.94417 4.14505 4.28619 4.31137 4.33017 4.45021 4.74788 4.87063 4.97998 5.00695 5.13604 5.17340 5.28566 5.37248 5.55367 5.67521 5.79584 6.25346 6.44461 6.80070 6.97956 7.39057 7.44896 7.59171 7.77377 8.28021 8.49393 8.80066 9.38862 10.92456 Molecular weight = 337.07amu Principal moments of inertia in cm(-1) A = 0.012460 B = 0.003948 C = 0.003808 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2246.620688 B = 7090.001077 C = 7350.734049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.214 3.786 3 C -0.049 4.049 4 C 0.111 3.889 5 N -0.578 5.578 6 C 0.215 3.785 7 C -0.538 4.538 8 H 0.076 0.924 9 C 0.077 3.923 10 N -0.894 5.894 11 Si 0.874 3.126 12 H -0.271 1.271 13 H -0.285 1.285 14 H -0.263 1.263 15 C 0.550 3.450 16 O -0.482 6.482 17 C -0.043 4.043 18 C -0.077 4.077 19 C -0.061 4.061 20 C -0.032 4.032 21 Cl -0.038 7.038 22 C -0.052 4.052 23 C -0.007 4.007 24 N 0.019 4.981 25 O -0.169 6.169 26 O -0.104 6.104 27 H 0.092 0.908 28 H 0.122 0.878 29 H 0.107 0.893 30 H 0.076 0.924 31 H 0.037 0.963 32 H 0.048 0.952 33 H 0.266 0.734 34 H 0.168 0.832 35 H 0.159 0.841 36 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.133 11.086 -11.752 18.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.104 4.104 3 C -0.091 4.091 4 C -0.015 4.015 5 N -0.310 5.310 6 C 0.096 3.904 7 C -0.576 4.576 8 H 0.094 0.906 9 C -0.127 4.127 10 N -0.531 5.531 11 Si 0.700 3.300 12 H -0.197 1.197 13 H -0.211 1.211 14 H -0.188 1.188 15 C 0.333 3.667 16 O -0.355 6.355 17 C -0.048 4.048 18 C -0.096 4.096 19 C -0.079 4.079 20 C -0.060 4.060 21 Cl -0.009 7.009 22 C -0.072 4.072 23 C -0.090 4.090 24 N 0.542 4.458 25 O -0.379 6.379 26 O -0.329 6.329 27 H 0.111 0.889 28 H 0.140 0.860 29 H 0.126 0.874 30 H 0.094 0.906 31 H 0.055 0.945 32 H 0.066 0.934 33 H 0.076 0.924 34 H 0.186 0.814 35 H 0.177 0.823 36 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -10.523 11.534 -11.264 19.252 hybrid contribution 0.874 -0.783 -0.538 1.291 sum -9.649 10.751 -11.803 18.654 Atomic orbital electron populations 1.81225 1.12753 1.08853 1.08303 1.28927 0.94911 0.93204 0.93399 1.19835 0.81880 1.06135 1.01218 1.21482 0.81683 1.02298 0.96069 1.47772 1.04937 1.22410 1.55837 1.19868 0.92968 0.83402 0.94179 1.21246 1.37817 1.06471 0.92058 0.90619 1.24816 0.94978 0.98225 0.94643 1.69874 1.40933 1.36452 1.05866 0.86888 0.80451 0.83421 0.79213 1.19650 1.21092 1.18791 1.17635 0.87423 0.82176 0.79442 1.90879 1.12501 1.77814 1.54311 1.20445 0.95300 0.98233 0.90868 1.21466 0.94045 0.92885 1.01234 1.21503 0.96606 0.96196 0.93617 1.20789 0.99108 0.92502 0.93568 1.98423 1.74649 1.39690 1.88154 1.20745 0.93139 0.91021 1.02296 1.20911 1.02786 0.96305 0.89048 1.43453 0.99994 1.01019 1.01329 1.94522 1.69153 1.76333 0.97881 1.94763 1.35794 1.20591 1.81768 0.88937 0.86049 0.87447 0.90595 0.94473 0.93378 0.92376 0.81439 0.82313 0.81626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -6.10 18.54 42.15 0.78 -5.31 16 2 C 0.21 2.49 15.43 -20.76 -0.32 2.17 16 3 C -0.05 -0.51 5.99 -29.52 -0.18 -0.69 16 4 C 0.11 1.36 5.16 -4.04 -0.02 1.34 16 5 N -0.58 -9.76 2.47 -176.20 -0.43 -10.19 16 6 C 0.22 4.52 4.25 -5.19 -0.02 4.49 16 7 C -0.54 -13.67 9.94 -34.44 -0.34 -14.01 16 8 H 0.08 2.08 8.06 -52.49 -0.42 1.66 16 9 C 0.08 2.05 5.47 -17.82 -0.10 1.96 16 10 N -0.89 -25.69 13.96 55.43 0.77 -24.91 16 11 Si 0.87 19.97 27.47 -169.99 -4.67 15.30 16 12 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 13 H -0.29 -6.51 7.11 56.52 0.40 -6.11 16 14 H -0.26 -5.56 6.54 56.52 0.37 -5.19 16 15 C 0.55 9.65 5.47 -12.36 -0.07 9.58 16 16 O -0.48 -10.64 14.66 -18.24 -0.27 -10.91 16 17 C -0.04 -0.57 4.60 -104.97 -0.48 -1.06 16 18 C -0.08 -0.76 7.84 -39.19 -0.31 -1.06 16 19 C -0.06 -0.45 9.81 -39.60 -0.39 -0.84 16 20 C -0.03 -0.26 6.33 -39.38 -0.25 -0.51 16 21 Cl -0.04 -0.28 28.95 -51.86 -1.50 -1.78 16 22 C -0.05 -0.51 9.33 -39.61 -0.37 -0.88 16 23 C -0.01 -0.09 6.87 -79.56 -0.55 -0.63 16 24 N 0.02 0.29 4.45 34.15 0.15 0.45 16 25 O -0.17 -2.49 18.46 -29.46 -0.54 -3.03 16 26 O -0.10 -1.87 15.17 -36.92 -0.56 -2.43 16 27 H 0.09 0.94 8.06 -51.93 -0.42 0.52 16 28 H 0.12 1.17 8.14 -51.92 -0.42 0.75 16 29 H 0.11 1.33 8.03 -51.93 -0.42 0.92 16 30 H 0.08 0.77 5.38 -51.93 -0.28 0.49 16 31 H 0.04 0.72 7.13 -51.93 -0.37 0.35 16 32 H 0.05 1.10 6.78 -51.92 -0.35 0.75 16 33 H 0.27 7.21 8.31 -40.82 -0.34 6.87 16 34 H 0.17 1.49 7.96 -52.49 -0.42 1.08 16 35 H 0.16 0.74 8.06 -52.49 -0.42 0.32 16 36 H 0.17 1.38 7.61 -52.49 -0.40 0.98 16 LS Contribution 344.88 15.07 5.20 5.20 Total: -1.00 -32.73 344.88 -7.55 -40.29 By element: Atomic # 1 Polarization: 0.57 SS G_CDS: -3.09 Total: -2.52 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: -3.39 Total: -0.14 kcal Atomic # 7 Polarization: -41.24 SS G_CDS: 1.27 Total: -39.97 kcal Atomic # 8 Polarization: -15.00 SS G_CDS: -1.37 Total: -16.37 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -4.67 Total: 15.30 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -1.50 Total: -1.78 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -32.73 -7.55 -40.29 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000002853931.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.454 kcal (2) G-P(sol) polarization free energy of solvation -32.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.288 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds