Wall clock time and date at job start Tue Mar 31 2020 05:39:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35857 * 120.90060 * 2 1 4 4 C 1.41001 * 119.82092 * 179.97438 * 3 2 1 5 5 O 1.21795 * 119.15115 * 180.02562 * 4 3 2 6 6 O 1.34218 * 121.68492 * 359.97438 * 4 3 2 7 7 C 1.35031 * 121.47012 * 0.02562 * 6 4 3 8 8 C 1.38698 * 120.72761 * 179.97438 * 7 6 4 9 9 C 1.38477 * 119.80943 * 180.02562 * 8 7 6 10 10 O 1.35760 * 119.73711 * 180.02562 * 9 8 7 11 11 C 1.42901 * 116.99770 * 0.02562 * 10 9 8 12 12 C 1.50700 * 109.47233 * 179.97438 * 11 10 9 13 13 O 1.21297 * 119.99628 * 0.02562 * 12 11 10 14 14 N 1.34768 * 120.00497 * 179.97438 * 12 11 10 15 15 C 1.37105 * 120.00451 * 179.97438 * 14 12 11 16 16 H 1.07997 * 119.99522 * 0.02562 * 15 14 12 17 17 C 1.38949 * 119.99793 * 180.02562 * 15 14 12 18 18 N 1.31413 * 119.99644 * 180.02562 * 17 15 14 19 19 Si 1.86799 * 120.00475 * 0.02562 * 17 15 14 20 20 H 1.48503 * 109.46995 * 89.99635 * 19 17 15 21 21 H 1.48495 * 109.47250 * 209.99991 * 19 17 15 22 22 H 1.48504 * 109.47123 * 330.00070 * 19 17 15 23 23 C 1.39476 * 120.53182 * 359.97438 * 9 8 7 24 24 Cl 1.73598 * 119.79655 * 180.02562 * 23 9 8 25 25 C 1.36538 * 120.40733 * 0.02562 * 23 9 8 26 26 C 1.39986 * 119.78581 * 359.70871 * 25 23 9 27 27 H 1.09002 * 109.47152 * 89.99874 * 1 2 3 28 28 H 1.09001 * 109.46980 * 329.99974 * 1 2 3 29 29 H 1.09004 * 109.47113 * 209.99955 * 1 2 3 30 30 H 1.07993 * 120.08750 * 0.02691 * 3 2 1 31 31 H 1.08002 * 120.09690 * 0.02562 * 8 7 6 32 32 H 1.08999 * 109.46780 * 299.99626 * 11 10 9 33 33 H 1.09001 * 109.47487 * 59.99683 * 11 10 9 34 34 H 0.97000 * 119.99827 * 0.02562 * 14 12 11 35 35 H 0.96996 * 120.00224 * 179.97438 * 18 17 15 36 36 H 1.07999 * 120.10494 * 180.02562 * 25 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2047 1.1657 0.0000 4 6 3.6145 1.1392 0.0005 5 8 4.2277 2.1915 0.0010 6 8 4.2978 -0.0160 0.0016 7 6 3.6654 -1.2091 0.0016 8 6 4.3870 -2.3936 0.0022 9 6 3.7190 -3.6066 0.0017 10 8 4.4267 -4.7652 0.0028 11 6 5.8514 -4.6550 0.0049 12 6 6.4619 -6.0328 0.0065 13 8 5.7470 -7.0128 0.0053 14 7 7.8019 -6.1763 0.0081 15 6 8.3572 -7.4298 0.0100 16 1 7.7208 -8.3023 0.0099 17 6 9.7388 -7.5775 0.0123 18 7 10.2711 -8.7791 0.0136 19 14 10.8397 -6.0684 0.0133 20 1 11.1291 -5.6678 1.4137 21 1 12.1120 -6.3833 -0.6846 22 1 10.1529 -4.9542 -0.6883 23 6 2.3248 -3.6477 0.0012 24 17 1.5069 -5.1790 0.0013 25 6 1.5993 -2.4911 0.0007 26 6 2.2590 -1.2564 0.0068 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 0.8900 0.5138 29 1 -0.3633 -0.8900 0.5138 30 1 1.6810 2.1101 0.0004 31 1 5.4668 -2.3701 0.0030 32 1 6.1754 -4.1147 -0.8846 33 1 6.1728 -4.1146 0.8954 34 1 8.3735 -5.3926 0.0086 35 1 11.2355 -8.8823 0.0148 36 1 0.5200 -2.5286 0.0007 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000065529445.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:39 Heat of formation + Delta-G solvation = -99.560486 kcal Electronic energy + Delta-G solvation = -25404.203864 eV Core-core repulsion = 21267.038515 eV Total energy + Delta-G solvation = -4137.165349 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 337.060 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.29741 -40.40288 -38.78868 -37.99419 -37.37102 -36.61356 -35.36073 -34.14190 -31.87810 -31.19249 -30.13145 -29.29439 -28.34867 -24.86646 -24.65808 -23.41994 -22.43709 -20.13318 -19.73587 -18.85723 -18.66970 -17.83867 -17.32949 -17.13963 -16.30016 -16.19299 -15.78980 -15.51044 -14.98070 -14.74289 -14.39879 -14.29837 -14.03064 -13.89204 -13.82296 -13.38808 -13.32760 -13.01666 -12.82791 -12.55372 -12.27969 -12.24487 -11.91395 -11.56462 -11.45904 -11.21605 -11.05305 -10.70499 -10.64717 -10.10619 -10.07757 -9.73949 -9.22882 -8.75857 -8.37476 -8.35112 -6.44406 -3.97888 -0.19135 0.46892 1.07293 1.83083 2.02367 2.39105 2.65232 2.93076 2.98379 3.08498 3.15457 3.45301 3.67738 3.78927 3.87123 3.98535 4.23270 4.40411 4.55042 4.59470 4.77739 4.91167 4.93615 5.00188 5.06298 5.06447 5.18061 5.30030 5.32838 5.33860 5.57589 5.63517 5.64181 5.78691 6.79618 6.85060 7.14378 7.40138 7.94065 8.40875 8.77975 9.23276 9.57545 10.67721 Molecular weight = 337.06amu Principal moments of inertia in cm(-1) A = 0.013909 B = 0.002980 C = 0.002458 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2012.589797 B = 9394.799493 C =11386.940404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.048 3.952 3 C -0.271 4.271 4 C 0.512 3.488 5 O -0.468 6.468 6 O -0.269 6.269 7 C 0.199 3.801 8 C -0.230 4.230 9 C 0.209 3.791 10 O -0.254 6.254 11 C 0.039 3.961 12 C 0.447 3.553 13 O -0.551 6.551 14 N -0.577 5.577 15 C -0.309 4.309 16 H 0.123 0.877 17 C 0.046 3.954 18 N -0.873 5.873 19 Si 0.879 3.121 20 H -0.268 1.268 21 H -0.274 1.274 22 H -0.268 1.268 23 C -0.088 4.088 24 Cl -0.033 7.033 25 C -0.010 4.010 26 C -0.193 4.193 27 H 0.093 0.907 28 H 0.085 0.915 29 H 0.082 0.918 30 H 0.163 0.837 31 H 0.160 0.840 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.373 0.627 35 H 0.276 0.724 36 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.096 18.906 -0.056 26.872 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C 0.047 3.953 3 C -0.290 4.290 4 C 0.362 3.638 5 O -0.356 6.356 6 O -0.181 6.181 7 C 0.154 3.846 8 C -0.250 4.250 9 C 0.159 3.841 10 O -0.163 6.163 11 C -0.040 4.040 12 C 0.232 3.768 13 O -0.432 6.432 14 N -0.217 5.217 15 C -0.437 4.437 16 H 0.140 0.860 17 C -0.158 4.158 18 N -0.512 5.512 19 Si 0.705 3.295 20 H -0.194 1.194 21 H -0.199 1.199 22 H -0.194 1.194 23 C -0.116 4.116 24 Cl -0.004 7.004 25 C -0.029 4.029 26 C -0.194 4.194 27 H 0.111 0.889 28 H 0.103 0.897 29 H 0.101 0.899 30 H 0.180 0.820 31 H 0.178 0.822 32 H 0.106 0.894 33 H 0.106 0.894 34 H 0.206 0.794 35 H 0.087 0.913 36 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -19.008 18.240 -0.054 26.344 hybrid contribution 1.160 1.211 -0.024 1.677 sum -17.848 19.451 -0.078 26.399 Atomic orbital electron populations 1.21048 0.88894 1.04570 1.04124 1.21433 0.96890 0.90591 0.86385 1.22302 0.92757 1.00316 1.13598 1.19193 0.88237 0.81062 0.75333 1.90990 1.72075 1.25579 1.46948 1.83580 1.43458 1.13667 1.77370 1.18648 0.89383 0.83187 0.93415 1.20491 1.01955 0.88150 1.14356 1.18711 0.90092 0.85515 0.89829 1.86339 1.19547 1.25289 1.85097 1.22814 0.77951 1.00066 1.03174 1.18990 0.83122 0.88666 0.86044 1.90641 1.60008 1.39314 1.53273 1.42015 1.04543 1.08719 1.66433 1.19420 0.91541 0.83935 1.48826 0.85959 1.25044 0.96585 0.97018 0.97190 1.69609 1.12430 1.21097 1.48022 0.86683 0.81379 0.82325 0.79108 1.19365 1.19896 1.19383 1.19835 0.89473 0.89458 1.12840 1.98422 1.77585 1.27400 1.96978 1.20587 1.00552 0.88177 0.93555 1.18712 0.91485 0.93994 1.15242 0.88895 0.89653 0.89881 0.81989 0.82206 0.89371 0.89365 0.79421 0.91304 0.82623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.42 9.64 36.01 0.35 -0.07 16 2 C 0.05 0.33 6.08 -102.18 -0.62 -0.29 16 3 C -0.27 -2.25 9.62 -39.39 -0.38 -2.63 16 4 C 0.51 6.18 7.89 31.78 0.25 6.43 16 5 O -0.47 -7.09 17.91 -19.60 -0.35 -7.44 16 6 O -0.27 -3.31 9.82 -20.80 -0.20 -3.52 16 7 C 0.20 2.17 6.76 -38.47 -0.26 1.91 16 8 C -0.23 -2.55 8.97 -39.32 -0.35 -2.91 16 9 C 0.21 2.64 6.69 -39.03 -0.26 2.38 16 10 O -0.25 -4.04 9.09 -38.90 -0.35 -4.40 16 11 C 0.04 0.58 5.21 36.01 0.19 0.77 16 12 C 0.45 9.67 7.86 -10.99 -0.09 9.59 16 13 O -0.55 -14.59 16.08 -14.37 -0.23 -14.82 16 14 N -0.58 -12.95 5.09 -10.96 -0.06 -13.00 16 15 C -0.31 -8.38 10.16 -14.93 -0.15 -8.53 16 16 H 0.12 3.81 7.39 -52.49 -0.39 3.42 16 17 C 0.05 1.21 5.50 -17.47 -0.10 1.11 16 18 N -0.87 -24.61 13.96 55.50 0.77 -23.83 16 19 Si 0.88 18.43 27.74 -169.99 -4.71 13.71 16 20 H -0.27 -5.52 7.11 56.52 0.40 -5.12 16 21 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 22 H -0.27 -5.05 6.52 56.52 0.37 -4.68 16 23 C -0.09 -0.99 6.29 -39.73 -0.25 -1.24 16 24 Cl -0.03 -0.40 28.46 -51.86 -1.48 -1.88 16 25 C -0.01 -0.08 9.12 -39.54 -0.36 -0.44 16 26 C -0.19 -1.71 5.87 -105.01 -0.62 -2.33 16 27 H 0.09 0.20 8.14 -51.93 -0.42 -0.22 16 28 H 0.08 0.18 8.10 -51.93 -0.42 -0.24 16 29 H 0.08 0.19 6.62 -51.93 -0.34 -0.16 16 30 H 0.16 1.00 8.06 -52.49 -0.42 0.58 16 31 H 0.16 1.55 6.25 -52.49 -0.33 1.22 16 32 H 0.09 1.07 7.64 -51.93 -0.40 0.68 16 33 H 0.09 1.06 7.64 -51.93 -0.40 0.67 16 34 H 0.37 7.14 5.76 -40.82 -0.24 6.90 16 35 H 0.28 7.17 8.31 -40.82 -0.34 6.83 16 36 H 0.16 0.78 6.52 -52.49 -0.34 0.44 16 LS Contribution 334.96 15.07 5.05 5.05 Total: -1.00 -34.38 334.96 -7.08 -41.46 By element: Atomic # 1 Polarization: 7.79 SS G_CDS: -2.86 Total: 4.92 kcal Atomic # 6 Polarization: 6.40 SS G_CDS: -2.65 Total: 3.75 kcal Atomic # 7 Polarization: -37.56 SS G_CDS: 0.72 Total: -36.84 kcal Atomic # 8 Polarization: -29.04 SS G_CDS: -1.14 Total: -30.18 kcal Atomic # 14 Polarization: 18.43 SS G_CDS: -4.71 Total: 13.71 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.48 Total: -1.88 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -34.38 -7.08 -41.46 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000065529445.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.102 kcal (2) G-P(sol) polarization free energy of solvation -34.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.459 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds