Wall clock time and date at job start Tue Mar 31 2020 05:24:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.30828 * 125.88951 * 2 1 4 4 N 1.40081 * 108.23508 * 179.97438 * 3 2 1 5 5 C 1.46503 * 126.03822 * 179.97438 * 4 3 2 6 6 C 1.34983 * 107.93027 * 359.77429 * 4 3 2 7 7 Cl 1.73598 * 126.14512 * 180.22528 * 6 4 3 8 8 C 1.35470 * 107.71245 * 0.36562 * 6 4 3 9 9 C 1.50695 * 126.04855 * 179.89990 * 8 6 4 10 10 H 1.09001 * 110.36845 * 192.34400 * 9 8 6 11 11 C 1.54380 * 110.51477 * 69.91979 * 9 8 6 12 12 C 1.54270 * 105.05910 * 217.31787 * 11 9 8 13 13 C 1.54379 * 105.06009 * 359.97438 * 12 11 9 14 14 N 1.48562 * 104.59768 * 23.85472 * 13 12 11 15 15 C 1.46899 * 111.00051 * 200.96094 * 14 13 12 16 16 C 1.53001 * 109.46877 * 285.41619 * 15 14 13 17 17 H 1.08999 * 109.47309 * 54.99690 * 16 15 14 18 18 C 1.47206 * 109.46965 * 294.99955 * 16 15 14 19 19 N 5.65013 * 132.32870 * 233.01003 * 2 1 3 20 20 C 1.52992 * 109.47148 * 174.99979 * 16 15 14 21 21 C 1.50700 * 109.47257 * 184.99859 * 20 16 15 22 22 H 1.07999 * 119.99988 * 359.97438 * 21 20 16 23 23 C 1.37885 * 120.00047 * 180.02562 * 21 20 16 24 24 N 1.31516 * 119.99913 * 180.02562 * 23 21 20 25 25 Si 1.86805 * 119.99854 * 359.72512 * 23 21 20 26 26 H 1.48498 * 109.46909 * 90.00086 * 25 23 21 27 27 H 1.48497 * 109.46701 * 209.99996 * 25 23 21 28 28 H 1.48500 * 109.46867 * 330.00101 * 25 23 21 29 29 H 1.08998 * 109.47192 * 270.04259 * 1 2 3 30 30 H 1.08994 * 109.46815 * 30.04156 * 1 2 3 31 31 H 1.09005 * 109.47182 * 150.03719 * 1 2 3 32 32 H 1.09004 * 109.46803 * 89.97202 * 5 4 3 33 33 H 1.08996 * 109.47715 * 209.97828 * 5 4 3 34 34 H 1.08999 * 109.47017 * 329.97961 * 5 4 3 35 35 H 1.08996 * 110.32379 * 336.20930 * 11 9 8 36 36 H 1.08998 * 110.32230 * 98.42404 * 11 9 8 37 37 H 1.08998 * 110.31851 * 118.89756 * 12 11 9 38 38 H 1.08994 * 110.31813 * 240.99964 * 12 11 9 39 39 H 1.08999 * 110.41219 * 265.07013 * 13 12 11 40 40 H 1.09001 * 110.40749 * 142.63340 * 13 12 11 41 41 H 1.09002 * 109.47207 * 165.41734 * 15 14 13 42 42 H 1.08998 * 109.47123 * 45.41247 * 15 14 13 43 43 H 1.09004 * 109.47330 * 64.99881 * 20 16 15 44 44 H 1.08997 * 109.47279 * 305.00368 * 20 16 15 45 45 H 0.97001 * 119.99646 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2740 1.0599 0.0000 4 7 3.6088 0.6351 0.0006 5 6 4.7894 1.5025 0.0003 6 6 3.6153 -0.7147 0.0060 7 17 5.0221 -1.7319 0.0144 8 6 2.3269 -1.1331 0.0005 9 6 1.8597 -2.5658 0.0015 10 1 0.7942 -2.6176 -0.2222 11 6 2.1572 -3.2309 1.3626 12 6 2.5648 -4.6789 1.0205 13 6 2.4787 -4.7670 -0.5183 14 7 2.6340 -3.3645 -0.9829 15 6 2.0943 -3.1962 -2.3388 16 6 3.0544 -3.8236 -3.3514 17 1 3.2374 -4.8639 -3.0824 18 6 4.3271 -3.0839 -3.3443 19 7 5.3118 -2.5133 -3.3364 20 6 2.4351 -3.7595 -4.7489 21 6 3.3236 -4.4854 -5.7259 22 1 4.2388 -4.9461 -5.3843 23 6 2.9687 -4.5606 -7.0562 24 7 3.7439 -5.1946 -7.9087 25 14 1.3827 -3.7692 -7.6459 26 1 1.6511 -2.3666 -8.0533 27 1 0.8522 -4.5289 -8.8063 28 1 0.3842 -3.7830 -6.5468 29 1 -0.3633 0.0008 1.0276 30 1 -0.3633 0.8896 -0.5145 31 1 -0.3634 -0.8904 -0.5133 32 1 5.0817 1.7188 1.0279 33 1 5.6095 1.0001 -0.5127 34 1 4.5555 2.4344 -0.5146 35 1 2.9760 -2.7158 1.8648 36 1 1.2651 -3.2267 1.9890 37 1 3.5836 -4.8744 1.3550 38 1 1.8739 -5.3853 1.4806 39 1 1.5100 -5.1633 -0.8228 40 1 3.2845 -5.3884 -0.9092 41 1 1.9808 -2.1340 -2.5554 42 1 1.1232 -3.6866 -2.4067 43 1 2.3342 -2.7179 -5.0542 44 1 1.4521 -4.2301 -4.7326 45 1 3.4944 -5.2471 -8.8446 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000075605463.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:24:58 Heat of formation + Delta-G solvation = 96.008196 kcal Electronic energy + Delta-G solvation = -27568.465159 eV Core-core repulsion = 23841.457906 eV Total energy + Delta-G solvation = -3727.007253 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 336.141 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.50233 -39.00095 -36.63473 -36.28961 -34.19216 -33.80772 -32.51800 -31.13335 -30.60566 -29.84439 -27.72653 -26.85516 -25.33425 -23.36579 -21.94614 -21.42283 -20.80080 -20.17615 -19.60466 -17.15096 -16.87392 -16.56705 -15.90597 -15.78680 -15.42133 -14.78168 -14.31031 -13.98825 -13.85472 -13.73813 -13.49771 -13.25625 -13.05894 -12.78021 -12.62332 -12.53747 -12.44657 -12.30112 -12.17072 -11.89712 -11.83283 -11.60049 -11.41977 -11.26928 -11.25091 -11.11745 -11.01548 -10.70972 -10.50078 -10.46366 -10.17964 -9.92787 -9.71802 -9.29276 -9.16550 -8.59380 -8.41917 -8.29082 -6.08416 -4.08443 1.55108 1.66266 2.48932 2.60600 3.28301 3.36026 3.36077 3.78835 3.88150 4.05895 4.24859 4.40299 4.70923 4.75168 4.80889 4.88669 4.95315 4.99437 5.05940 5.14128 5.23533 5.26842 5.32146 5.43637 5.49996 5.55750 5.62552 5.66588 5.67237 5.76978 5.85024 5.85916 5.93227 6.01219 6.16268 6.17613 6.31536 6.35931 6.43782 6.61615 6.97911 7.00724 7.16264 7.17325 7.49934 7.66975 8.43845 8.65613 8.95774 9.51869 11.04762 Molecular weight = 336.14amu Principal moments of inertia in cm(-1) A = 0.012254 B = 0.003915 C = 0.003818 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2284.337460 B = 7150.179041 C = 7331.621531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.086 3.914 3 N -0.283 5.283 4 N -0.371 5.371 5 C 0.098 3.902 6 C 0.155 3.845 7 Cl 0.019 6.981 8 C -0.206 4.206 9 C 0.142 3.858 10 H 0.064 0.936 11 C -0.112 4.112 12 C -0.121 4.121 13 C 0.032 3.968 14 N -0.502 5.502 15 C 0.052 3.948 16 C 0.025 3.975 17 H 0.103 0.897 18 C 0.254 3.746 19 N -0.471 5.471 20 C -0.005 4.005 21 C -0.524 4.524 22 H 0.074 0.926 23 C 0.071 3.929 24 N -0.898 5.898 25 Si 0.876 3.124 26 H -0.277 1.277 27 H -0.287 1.287 28 H -0.263 1.263 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.079 0.921 32 H 0.076 0.924 33 H 0.089 0.911 34 H 0.093 0.907 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.069 0.931 38 H 0.066 0.934 39 H 0.049 0.951 40 H 0.085 0.915 41 H 0.075 0.925 42 H 0.055 0.945 43 H 0.019 0.981 44 H 0.035 0.965 45 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.532 7.253 22.148 24.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.080 4.080 3 N -0.106 5.106 4 N -0.155 5.155 5 C -0.043 4.043 6 C 0.001 3.999 7 Cl 0.047 6.953 8 C -0.218 4.218 9 C 0.032 3.968 10 H 0.082 0.918 11 C -0.151 4.151 12 C -0.159 4.159 13 C -0.096 4.096 14 N -0.226 5.226 15 C -0.077 4.077 16 C 0.003 3.997 17 H 0.121 0.879 18 C -0.064 4.064 19 N -0.147 5.147 20 C -0.044 4.044 21 C -0.562 4.562 22 H 0.092 0.908 23 C -0.131 4.131 24 N -0.536 5.536 25 Si 0.703 3.297 26 H -0.203 1.203 27 H -0.213 1.213 28 H -0.187 1.187 29 H 0.097 0.903 30 H 0.093 0.907 31 H 0.098 0.902 32 H 0.095 0.905 33 H 0.108 0.892 34 H 0.112 0.888 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.087 0.913 38 H 0.085 0.915 39 H 0.067 0.933 40 H 0.103 0.897 41 H 0.094 0.906 42 H 0.074 0.926 43 H 0.037 0.963 44 H 0.054 0.946 45 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -4.142 9.493 21.932 24.254 hybrid contribution -1.582 -0.908 -0.698 1.953 sum -5.724 8.585 21.234 23.608 Atomic orbital electron populations 1.20209 0.86287 1.03641 1.03026 1.22109 0.96948 0.89801 0.99166 1.77429 0.85241 1.21763 1.26209 1.48440 1.06106 1.03147 1.57820 1.21922 0.83907 0.95021 1.03471 1.21470 0.91302 0.83280 1.03836 1.98443 1.36589 1.63733 1.96505 1.19267 0.89713 0.95693 1.17172 1.20750 0.95630 0.87848 0.92535 0.91775 1.22301 1.01351 0.95515 0.95902 1.22264 1.01850 0.96217 0.95601 1.23141 1.01109 0.90690 0.94660 1.65342 1.50721 1.05322 1.01185 1.22380 0.96045 1.01653 0.87644 1.18879 0.85571 0.97587 0.97647 0.87882 1.28729 0.94060 0.92882 0.90682 1.81034 1.11978 1.10691 1.11025 1.19636 0.97078 0.97737 0.89950 1.21025 1.08131 1.34893 0.92185 0.90809 1.24983 0.96673 0.94699 0.96706 1.69909 1.37738 1.42443 1.03523 0.86838 0.84401 0.79686 0.78746 1.20315 1.21280 1.18729 0.90350 0.90670 0.90174 0.90540 0.89195 0.88841 0.91315 0.91466 0.91257 0.91513 0.93279 0.89703 0.90603 0.92645 0.96317 0.94648 0.92624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.64 10.21 36.01 0.37 -0.27 16 2 C 0.09 1.08 7.22 -82.41 -0.59 0.48 16 3 N -0.28 -3.96 12.57 33.67 0.42 -3.54 16 4 N -0.37 -4.98 4.01 -64.90 -0.26 -5.24 16 5 C 0.10 0.96 11.31 59.85 0.68 1.64 16 6 C 0.16 2.15 7.20 -17.15 -0.12 2.03 16 7 Cl 0.02 0.27 27.49 -51.86 -1.43 -1.16 16 8 C -0.21 -2.66 4.65 -105.01 -0.49 -3.15 16 9 C 0.14 1.59 2.48 -67.23 -0.17 1.42 16 10 H 0.06 0.64 6.82 -51.93 -0.35 0.29 16 11 C -0.11 -1.07 6.54 -25.34 -0.17 -1.24 16 12 C -0.12 -1.11 7.00 -25.34 -0.18 -1.28 16 13 C 0.03 0.35 5.91 -2.18 -0.01 0.33 16 14 N -0.50 -6.43 3.59 -223.52 -0.80 -7.24 16 15 C 0.05 0.75 4.14 -3.82 -0.02 0.73 16 16 C 0.03 0.46 2.26 -93.41 -0.21 0.24 16 17 H 0.10 1.79 7.28 -51.93 -0.38 1.41 16 18 C 0.25 5.30 13.68 -20.69 -0.28 5.01 16 19 N -0.47 -10.57 18.55 42.23 0.78 -9.79 16 20 C -0.01 -0.11 3.49 -27.89 -0.10 -0.21 16 21 C -0.52 -14.24 9.15 -34.44 -0.32 -14.55 16 22 H 0.07 2.20 7.84 -52.49 -0.41 1.79 16 23 C 0.07 2.02 5.47 -17.82 -0.10 1.92 16 24 N -0.90 -27.25 13.96 55.43 0.77 -26.48 16 25 Si 0.88 20.87 27.47 -169.99 -4.67 16.20 16 26 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 27 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 28 H -0.26 -5.78 6.54 56.52 0.37 -5.41 16 29 H 0.08 0.55 8.14 -51.93 -0.42 0.13 16 30 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 31 H 0.08 0.61 7.14 -51.93 -0.37 0.24 16 32 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 33 H 0.09 0.87 7.81 -51.93 -0.41 0.46 16 34 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 35 H 0.07 0.73 7.63 -51.93 -0.40 0.33 16 36 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 37 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 38 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 39 H 0.05 0.49 7.75 -51.93 -0.40 0.09 16 40 H 0.08 0.98 7.73 -51.93 -0.40 0.58 16 41 H 0.08 1.18 7.78 -51.93 -0.40 0.77 16 42 H 0.06 0.70 7.77 -51.93 -0.40 0.29 16 43 H 0.02 0.41 7.58 -51.93 -0.39 0.02 16 44 H 0.04 0.72 7.19 -51.93 -0.37 0.35 16 45 H 0.26 7.51 8.31 -40.82 -0.34 7.17 16 LS Contribution 384.70 15.07 5.80 5.80 Total: -1.00 -33.38 384.70 -7.90 -41.28 By element: Atomic # 1 Polarization: 3.87 SS G_CDS: -6.82 Total: -2.95 kcal Atomic # 6 Polarization: -5.18 SS G_CDS: -1.70 Total: -6.89 kcal Atomic # 7 Polarization: -53.20 SS G_CDS: 0.92 Total: -52.29 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -4.67 Total: 16.20 kcal Atomic # 17 Polarization: 0.27 SS G_CDS: -1.43 Total: -1.16 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -33.38 -7.90 -41.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000075605463.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.291 kcal (2) G-P(sol) polarization free energy of solvation -33.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.283 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds