Wall clock time and date at job start Tue Mar 31 2020 05:45:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34227 * 117.00165 * 2 1 4 4 O 1.20826 * 119.99858 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99878 * 180.02562 * 3 2 1 6 6 N 1.46495 * 109.47085 * 179.97438 * 5 3 2 7 7 C 1.36715 * 120.00331 * 265.39212 * 6 5 3 8 8 H 1.07999 * 120.00583 * 206.33810 * 7 6 5 9 9 C 1.39118 * 120.00134 * 26.34289 * 7 6 5 10 10 N 1.31329 * 120.00010 * 5.69649 * 9 7 6 11 11 Si 1.86805 * 120.00431 * 185.69341 * 9 7 6 12 12 H 1.48504 * 109.46669 * 89.99873 * 11 9 7 13 13 H 1.48497 * 109.47361 * 209.99860 * 11 9 7 14 14 H 1.48498 * 109.46754 * 330.00261 * 11 9 7 15 15 C 1.34780 * 119.99567 * 85.39346 * 6 5 3 16 16 O 1.21759 * 120.00336 * 5.19587 * 15 6 5 17 17 C 1.46197 * 119.99836 * 185.19716 * 15 6 5 18 18 C 1.50700 * 119.99785 * 255.79046 * 17 15 6 19 19 C 1.35010 * 120.00429 * 75.78158 * 17 15 6 20 20 C 1.47096 * 120.00122 * 171.53916 * 19 17 15 21 21 C 1.39913 * 120.15481 * 144.73070 * 20 19 17 22 22 C 1.37825 * 119.83291 * 179.97438 * 21 20 19 23 23 C 1.38561 * 120.16174 * 359.97438 * 22 21 20 24 24 Cl 1.73593 * 119.83755 * 179.97438 * 23 22 21 25 25 C 1.38562 * 120.32502 * 0.25566 * 23 22 21 26 26 C 1.37827 * 120.15787 * 359.48674 * 25 23 22 27 27 H 1.09000 * 109.46485 * 300.00026 * 1 2 3 28 28 H 1.08998 * 109.46823 * 59.99692 * 1 2 3 29 29 H 1.08994 * 109.47379 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46713 * 60.00159 * 5 3 2 31 31 H 1.08995 * 109.46838 * 299.99984 * 5 3 2 32 32 H 0.97001 * 120.00313 * 180.02562 * 10 9 7 33 33 H 1.09000 * 109.47005 * 269.96701 * 18 17 15 34 34 H 1.09001 * 109.47101 * 29.95898 * 18 17 15 35 35 H 1.08993 * 109.47660 * 149.96496 * 18 17 15 36 36 H 1.08009 * 119.99865 * 351.54889 * 19 17 15 37 37 H 1.07998 * 120.08242 * 0.02562 * 21 20 19 38 38 H 1.07995 * 119.91805 * 179.97438 * 22 21 20 39 39 H 1.08000 * 119.91892 * 179.72093 * 25 23 22 40 40 H 1.07994 * 120.08137 * 180.24918 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 7 3.9819 2.6796 -0.0011 7 6 4.2665 3.3079 -1.1815 8 1 4.9493 4.1445 -1.1970 9 6 3.6766 2.8696 -2.3627 10 7 2.7626 1.9271 -2.3299 11 14 4.1843 3.6218 -3.9955 12 1 5.3167 2.8487 -4.5657 13 1 3.0359 3.5843 -4.9362 14 1 4.6039 5.0302 -3.7824 15 6 4.0835 3.3526 1.1622 16 8 3.9225 2.7696 2.2190 17 6 4.3870 4.7827 1.1552 18 6 5.7698 5.2613 1.5155 19 6 3.4285 5.6746 0.8259 20 6 3.6739 7.1149 0.9969 21 6 3.1409 8.0319 0.0845 22 6 3.3746 9.3799 0.2514 23 6 4.1348 9.8276 1.3199 24 17 4.4244 11.5273 1.5218 25 6 4.6697 8.9249 2.2248 26 6 4.4400 7.5743 2.0736 27 1 -0.3632 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.9557 0.7808 -0.8908 31 1 3.9564 0.7804 0.8891 32 1 2.3515 1.6213 -3.1535 33 1 5.8237 5.4413 2.5891 34 1 6.5009 4.5022 1.2373 35 1 5.9850 6.1863 0.9807 36 1 2.4814 5.3307 0.4369 37 1 2.5473 7.6844 -0.7481 38 1 2.9643 10.0889 -0.4522 39 1 5.2650 9.2807 3.0528 40 1 4.8542 6.8722 2.7819 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095442963.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:45:35 Heat of formation + Delta-G solvation = -72.270695 kcal Electronic energy + Delta-G solvation = -26871.230228 eV Core-core repulsion = 22871.081347 eV Total energy + Delta-G solvation = -4000.148881 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.091 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -39.65398 -39.24180 -38.33932 -36.57055 -35.50115 -34.58429 -34.36533 -31.62513 -31.15808 -30.09192 -28.48033 -26.86928 -26.24457 -24.92229 -22.83957 -22.56843 -20.86339 -19.84503 -18.81503 -17.11114 -16.70709 -16.55941 -16.09450 -15.56785 -15.40655 -15.22549 -15.08698 -14.43394 -14.38281 -13.90166 -13.70031 -13.58501 -13.19487 -13.06071 -12.58299 -12.48002 -12.42341 -11.97259 -11.68905 -11.61132 -11.46054 -11.35171 -11.29592 -11.22729 -11.02836 -10.87290 -10.75887 -10.68187 -10.46973 -9.81427 -9.58960 -9.22748 -9.06765 -8.99652 -8.75459 -7.98507 -7.74301 -6.55562 -4.14731 0.93813 1.37230 2.12170 2.52868 3.03579 3.13667 3.16451 3.42897 3.71046 3.82268 3.91629 4.05444 4.59667 4.83850 4.89222 4.91260 5.17849 5.35236 5.44411 5.57300 5.69487 5.72061 5.74677 5.77786 5.89746 5.94618 6.00863 6.14640 6.21908 6.27065 6.30509 6.33068 6.40190 6.55587 6.65410 6.86925 7.03968 7.15943 7.27554 7.44597 7.56917 8.18509 8.89640 9.11517 9.25389 9.65519 10.51699 Molecular weight = 337.09amu Principal moments of inertia in cm(-1) A = 0.013924 B = 0.003341 C = 0.003051 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2010.466250 B = 8379.126843 C = 9175.238813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 O -0.376 6.376 3 C 0.491 3.509 4 O -0.503 6.503 5 C 0.157 3.843 6 N -0.419 5.419 7 C -0.328 4.328 8 H 0.101 0.899 9 C 0.042 3.958 10 N -0.875 5.875 11 Si 0.929 3.071 12 H -0.276 1.276 13 H -0.283 1.283 14 H -0.268 1.268 15 C 0.505 3.495 16 O -0.597 6.597 17 C -0.084 4.084 18 C -0.110 4.110 19 C -0.109 4.109 20 C -0.026 4.026 21 C -0.098 4.098 22 C -0.111 4.111 23 C -0.045 4.045 24 Cl -0.084 7.084 25 C -0.111 4.111 26 C -0.107 4.107 27 H 0.049 0.951 28 H 0.054 0.946 29 H 0.085 0.915 30 H 0.122 0.878 31 H 0.081 0.919 32 H 0.274 0.726 33 H 0.070 0.930 34 H 0.065 0.935 35 H 0.071 0.929 36 H 0.132 0.868 37 H 0.135 0.865 38 H 0.130 0.870 39 H 0.130 0.870 40 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.112 7.764 2.703 8.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 O -0.294 6.294 3 C 0.332 3.668 4 O -0.388 6.388 5 C 0.031 3.969 6 N -0.137 5.137 7 C -0.456 4.456 8 H 0.119 0.881 9 C -0.162 4.162 10 N -0.514 5.514 11 Si 0.756 3.244 12 H -0.202 1.202 13 H -0.208 1.208 14 H -0.192 1.192 15 C 0.295 3.705 16 O -0.483 6.483 17 C -0.087 4.087 18 C -0.167 4.167 19 C -0.128 4.128 20 C -0.026 4.026 21 C -0.116 4.116 22 C -0.129 4.129 23 C -0.071 4.071 24 Cl -0.056 7.056 25 C -0.130 4.130 26 C -0.125 4.125 27 H 0.068 0.932 28 H 0.073 0.927 29 H 0.103 0.897 30 H 0.140 0.860 31 H 0.099 0.901 32 H 0.085 0.915 33 H 0.089 0.911 34 H 0.084 0.916 35 H 0.089 0.911 36 H 0.150 0.850 37 H 0.153 0.847 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.709 7.817 3.058 8.566 hybrid contribution -0.275 0.539 -1.221 1.363 sum 1.434 8.355 1.837 8.674 Atomic orbital electron populations 1.22910 0.78778 1.01720 1.01561 1.86447 1.21592 1.35528 1.85793 1.23735 0.92108 0.80543 0.70408 1.90489 1.66470 1.36373 1.45481 1.20432 0.87416 0.85576 1.03454 1.43277 1.56654 1.07924 1.05835 1.19565 1.25999 1.16633 0.83378 0.88094 1.25333 0.94244 0.96455 1.00207 1.69518 1.24460 1.28467 1.28908 0.85873 0.78079 0.79619 0.80853 1.20169 1.20844 1.19219 1.18097 0.81852 0.86545 0.84027 1.90708 1.57200 1.69088 1.31309 1.21608 0.95863 0.93638 0.97623 1.20966 0.93226 1.01420 1.01108 1.21783 1.00676 0.89212 1.01151 1.19226 0.95631 0.93653 0.94067 1.21366 0.99578 0.91622 0.99034 1.20927 0.98836 0.96134 0.97024 1.20984 1.02981 0.84267 0.98911 1.98346 1.95251 1.14743 1.97213 1.20929 1.00586 0.92513 0.98954 1.21648 0.98092 0.94750 0.97970 0.93228 0.92683 0.89685 0.85977 0.90142 0.91524 0.91139 0.91567 0.91053 0.85021 0.84668 0.85190 0.85169 0.84196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.77 10.56 101.05 1.07 1.84 16 2 O -0.38 -8.02 10.57 -39.25 -0.41 -8.43 16 3 C 0.49 11.94 5.90 36.01 0.21 12.15 16 4 O -0.50 -13.61 15.47 -18.75 -0.29 -13.90 16 5 C 0.16 3.68 5.20 -5.19 -0.03 3.65 16 6 N -0.42 -10.19 2.14 -117.77 -0.25 -10.44 16 7 C -0.33 -7.86 8.76 -15.05 -0.13 -7.99 16 8 H 0.10 2.32 7.07 -52.49 -0.37 1.95 16 9 C 0.04 1.01 5.18 -17.44 -0.09 0.92 16 10 N -0.88 -21.85 8.49 55.50 0.47 -21.38 16 11 Si 0.93 18.88 29.56 -169.99 -5.02 13.85 16 12 H -0.28 -5.52 7.11 56.52 0.40 -5.12 16 13 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 14 H -0.27 -5.36 7.11 56.52 0.40 -4.95 16 15 C 0.51 12.06 6.82 -13.06 -0.09 11.97 16 16 O -0.60 -15.64 16.74 5.14 0.09 -15.56 16 17 C -0.08 -1.67 4.07 -102.58 -0.42 -2.09 16 18 C -0.11 -1.74 8.23 36.01 0.30 -1.44 16 19 C -0.11 -2.06 9.24 -37.14 -0.34 -2.40 16 20 C -0.03 -0.40 5.17 -105.05 -0.54 -0.94 16 21 C -0.10 -1.38 9.80 -39.11 -0.38 -1.76 16 22 C -0.11 -1.39 9.81 -39.61 -0.39 -1.78 16 23 C -0.05 -0.56 6.33 -39.34 -0.25 -0.81 16 24 Cl -0.08 -0.94 28.95 -51.86 -1.50 -2.45 16 25 C -0.11 -1.36 9.81 -39.61 -0.39 -1.74 16 26 C -0.11 -1.45 7.76 -39.11 -0.30 -1.75 16 27 H 0.05 0.84 8.13 -51.93 -0.42 0.42 16 28 H 0.05 0.98 8.13 -51.93 -0.42 0.56 16 29 H 0.08 1.12 8.14 -51.93 -0.42 0.69 16 30 H 0.12 2.83 6.69 -51.93 -0.35 2.48 16 31 H 0.08 1.78 7.50 -51.93 -0.39 1.39 16 32 H 0.27 6.62 8.31 -40.82 -0.34 6.28 16 33 H 0.07 0.98 6.68 -51.93 -0.35 0.63 16 34 H 0.07 1.04 8.11 -51.93 -0.42 0.62 16 35 H 0.07 1.02 6.44 -51.93 -0.33 0.68 16 36 H 0.13 2.78 8.06 -52.48 -0.42 2.36 16 37 H 0.14 1.81 8.06 -52.49 -0.42 1.39 16 38 H 0.13 1.38 8.06 -52.49 -0.42 0.96 16 39 H 0.13 1.31 8.06 -52.49 -0.42 0.89 16 40 H 0.14 1.79 5.46 -52.49 -0.29 1.51 16 LS Contribution 358.75 15.07 5.41 5.41 Total: -1.00 -29.92 358.75 -7.89 -37.81 By element: Atomic # 1 Polarization: 11.86 SS G_CDS: -4.59 Total: 7.27 kcal Atomic # 6 Polarization: 9.60 SS G_CDS: -1.78 Total: 7.82 kcal Atomic # 7 Polarization: -32.04 SS G_CDS: 0.22 Total: -31.82 kcal Atomic # 8 Polarization: -37.27 SS G_CDS: -0.62 Total: -37.89 kcal Atomic # 14 Polarization: 18.88 SS G_CDS: -5.02 Total: 13.85 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.50 Total: -2.45 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -29.92 -7.89 -37.81 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095442963.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.462 kcal (2) G-P(sol) polarization free energy of solvation -29.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.271 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds