Wall clock time and date at job start Tue Mar 31 2020 05:45:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34224 * 117.00246 * 2 1 4 4 O 1.20834 * 119.99882 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00121 * 180.02562 * 3 2 1 6 6 N 1.46506 * 109.47181 * 179.97438 * 5 3 2 7 7 C 1.36712 * 119.99728 * 96.35349 * 6 5 3 8 8 H 1.08003 * 120.00053 * 153.01194 * 7 6 5 9 9 C 1.39123 * 120.00334 * 332.72984 * 7 6 5 10 10 N 1.31328 * 119.99587 * 353.34310 * 9 7 6 11 11 Si 1.86792 * 120.00212 * 173.34578 * 9 7 6 12 12 H 1.48496 * 109.47165 * 359.97438 * 11 9 7 13 13 H 1.48500 * 109.47282 * 120.00138 * 11 9 7 14 14 H 1.48507 * 109.46920 * 240.00138 * 11 9 7 15 15 C 1.34777 * 120.00127 * 276.35069 * 6 5 3 16 16 O 1.21759 * 119.99661 * 0.02562 * 15 6 5 17 17 C 1.46223 * 120.00191 * 179.97438 * 15 6 5 18 18 C 1.34970 * 120.00213 * 174.75318 * 17 15 6 19 19 C 1.50703 * 120.00047 * 359.80301 * 18 17 15 20 20 C 1.47151 * 120.00117 * 179.79795 * 18 17 15 21 21 C 1.39898 * 120.16950 * 294.72520 * 20 18 17 22 22 C 1.37855 * 119.84784 * 179.74528 * 21 20 18 23 23 C 1.38417 * 120.18848 * 0.55556 * 22 21 20 24 24 C 1.38502 * 120.33928 * 359.69711 * 23 22 21 25 25 Cl 1.73600 * 119.92413 * 180.02562 * 24 23 22 26 26 C 1.38016 * 120.14714 * 0.02562 * 24 23 22 27 27 H 1.09004 * 109.46614 * 299.99990 * 1 2 3 28 28 H 1.08997 * 109.47045 * 59.99810 * 1 2 3 29 29 H 1.08996 * 109.47391 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47317 * 60.00099 * 5 3 2 31 31 H 1.08996 * 109.47218 * 299.99970 * 5 3 2 32 32 H 0.97001 * 119.99535 * 179.97438 * 10 9 7 33 33 H 1.08000 * 119.99983 * 354.75530 * 17 15 6 34 34 H 1.09002 * 109.47099 * 54.54620 * 19 18 17 35 35 H 1.08997 * 109.47237 * 174.54608 * 19 18 17 36 36 H 1.08994 * 109.46731 * 294.54871 * 19 18 17 37 37 H 1.08001 * 120.07483 * 0.02562 * 21 20 18 38 38 H 1.08002 * 119.90558 * 180.25066 * 22 21 20 39 39 H 1.08001 * 119.82716 * 179.72073 * 23 22 21 40 40 H 1.08004 * 120.09362 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 7 3.9818 2.6797 -0.0011 7 6 4.3017 3.2983 1.1754 8 1 4.9929 4.1281 1.1786 9 6 3.7324 2.8626 2.3677 10 7 2.7915 1.9466 2.3498 11 14 4.3063 3.5805 3.9939 12 1 5.3687 4.5873 3.7431 13 1 3.1605 4.2296 4.6802 14 1 4.8464 2.4948 4.8512 15 6 4.0487 3.3623 -1.1613 16 8 3.7633 2.8114 -2.2090 17 6 4.4628 4.7646 -1.1618 18 6 4.6321 5.4179 -2.3306 19 6 4.3987 4.7008 -3.6354 20 6 5.0445 6.8305 -2.3309 21 6 4.1957 7.8108 -1.8060 22 6 4.5910 9.1315 -1.8049 23 6 5.8195 9.4908 -2.3318 24 6 6.6637 8.5273 -2.8583 25 17 8.2023 8.9899 -3.5158 26 6 6.2845 7.2003 -2.8614 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 3.9558 0.7808 -0.8908 31 1 3.9564 0.7805 0.8891 32 1 2.3949 1.6425 3.1812 33 1 4.6331 5.2777 -0.2268 34 1 3.3994 4.2656 -3.6371 35 1 4.4884 5.4081 -4.4598 36 1 5.1396 3.9100 -3.7528 37 1 3.2349 7.5331 -1.3984 38 1 3.9381 9.8886 -1.3962 39 1 6.1213 10.5278 -2.3320 40 1 6.9436 6.4496 -3.2717 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000098018805.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:45:57 Heat of formation + Delta-G solvation = -73.448568 kcal Electronic energy + Delta-G solvation = -26531.173559 eV Core-core repulsion = 22530.973602 eV Total energy + Delta-G solvation = -4000.199957 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 337.091 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -39.59557 -39.26005 -38.32646 -36.58517 -35.64740 -34.71641 -34.05535 -31.64625 -30.82976 -29.91515 -28.79762 -27.12504 -26.08170 -24.69939 -23.30593 -22.51370 -20.76257 -19.62705 -18.86257 -17.14466 -16.56275 -16.44292 -16.27126 -15.50112 -15.35546 -15.33131 -15.15737 -14.50015 -14.20866 -13.90425 -13.70077 -13.55820 -13.46771 -12.77879 -12.54959 -12.49273 -12.31316 -11.99361 -11.69449 -11.55723 -11.43817 -11.36460 -11.31720 -11.30228 -11.19356 -10.88958 -10.80487 -10.55373 -10.34587 -9.79877 -9.54233 -9.08556 -9.06329 -8.80546 -8.46445 -8.31753 -7.88117 -6.55656 -4.12272 1.04670 1.20496 1.94896 2.15041 3.06399 3.14060 3.17607 3.57106 3.65739 3.74619 4.03481 4.33616 4.53686 4.80765 4.87966 5.00288 5.10354 5.21768 5.36079 5.60864 5.70129 5.70428 5.78504 5.80364 5.95627 6.04960 6.11547 6.17213 6.27361 6.29641 6.34396 6.42961 6.49583 6.62120 6.72857 6.74836 6.98946 7.14926 7.26916 7.48421 7.61150 8.18443 8.91098 9.14777 9.31315 9.72583 10.51483 Molecular weight = 337.09amu Principal moments of inertia in cm(-1) A = 0.013679 B = 0.003202 C = 0.002831 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2046.484878 B = 8743.234440 C = 9887.006957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 O -0.377 6.377 3 C 0.489 3.511 4 O -0.500 6.500 5 C 0.160 3.840 6 N -0.419 5.419 7 C -0.332 4.332 8 H 0.103 0.897 9 C 0.040 3.960 10 N -0.872 5.872 11 Si 0.931 3.069 12 H -0.267 1.267 13 H -0.280 1.280 14 H -0.279 1.279 15 C 0.495 3.505 16 O -0.597 6.597 17 C -0.138 4.138 18 C -0.067 4.067 19 C -0.094 4.094 20 C -0.020 4.020 21 C -0.101 4.101 22 C -0.106 4.106 23 C -0.119 4.119 24 C -0.034 4.034 25 Cl -0.078 7.078 26 C -0.099 4.099 27 H 0.054 0.946 28 H 0.049 0.951 29 H 0.085 0.915 30 H 0.080 0.920 31 H 0.121 0.879 32 H 0.273 0.727 33 H 0.127 0.873 34 H 0.088 0.912 35 H 0.039 0.961 36 H 0.072 0.928 37 H 0.133 0.867 38 H 0.132 0.868 39 H 0.130 0.870 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.766 7.458 -5.398 9.946 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 O -0.294 6.294 3 C 0.330 3.670 4 O -0.385 6.385 5 C 0.034 3.966 6 N -0.136 5.136 7 C -0.459 4.459 8 H 0.120 0.880 9 C -0.165 4.165 10 N -0.510 5.510 11 Si 0.757 3.243 12 H -0.191 1.191 13 H -0.206 1.206 14 H -0.204 1.204 15 C 0.287 3.713 16 O -0.485 6.485 17 C -0.159 4.159 18 C -0.070 4.070 19 C -0.150 4.150 20 C -0.020 4.020 21 C -0.120 4.120 22 C -0.124 4.124 23 C -0.138 4.138 24 C -0.060 4.060 25 Cl -0.049 7.049 26 C -0.118 4.118 27 H 0.073 0.927 28 H 0.068 0.932 29 H 0.103 0.897 30 H 0.098 0.902 31 H 0.139 0.861 32 H 0.084 0.916 33 H 0.145 0.855 34 H 0.107 0.893 35 H 0.058 0.942 36 H 0.090 0.910 37 H 0.151 0.849 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.413 7.402 -5.775 9.989 hybrid contribution -0.025 0.502 1.256 1.353 sum 3.389 7.904 -4.518 9.714 Atomic orbital electron populations 1.22910 0.78809 1.01707 1.01568 1.86449 1.21586 1.35592 1.85819 1.23798 0.92163 0.80527 0.70536 1.90507 1.66438 1.36357 1.45163 1.20405 0.87360 0.85544 1.03301 1.43176 1.56293 1.07893 1.06277 1.19676 1.25510 1.17401 0.83346 0.87969 1.25388 0.94320 0.96561 1.00252 1.69585 1.23525 1.29371 1.28474 0.85799 0.78593 0.78946 0.80972 1.19122 1.20614 1.20432 1.18057 0.82655 0.86699 0.83877 1.90652 1.55808 1.70441 1.31558 1.22953 1.00116 0.95371 0.97464 1.20789 0.99009 0.90942 0.96262 1.20806 1.04420 0.98201 0.91579 1.18946 0.93066 0.93269 0.96722 1.21580 0.99949 0.92237 0.98192 1.21034 0.95745 0.96390 0.99270 1.21067 0.94154 0.98964 0.99574 1.20777 0.88403 0.94437 1.02388 1.98358 1.29243 1.92598 1.84743 1.21195 0.96424 0.94155 1.00032 0.92702 0.93216 0.89685 0.90192 0.86138 0.91565 0.85488 0.89326 0.94229 0.90961 0.84876 0.85029 0.85254 0.84736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.78 10.56 101.05 1.07 1.84 16 2 O -0.38 -8.10 10.57 -39.24 -0.41 -8.51 16 3 C 0.49 12.02 5.97 36.00 0.21 12.23 16 4 O -0.50 -13.82 15.47 -18.76 -0.29 -14.11 16 5 C 0.16 3.76 5.13 -5.19 -0.03 3.73 16 6 N -0.42 -10.32 2.16 -117.75 -0.25 -10.58 16 7 C -0.33 -8.09 8.86 -15.05 -0.13 -8.23 16 8 H 0.10 2.35 6.28 -52.48 -0.33 2.02 16 9 C 0.04 0.97 5.15 -17.44 -0.09 0.88 16 10 N -0.87 -22.14 8.69 55.50 0.48 -21.65 16 11 Si 0.93 18.98 29.56 -169.99 -5.02 13.96 16 12 H -0.27 -5.29 7.11 56.52 0.40 -4.89 16 13 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 14 H -0.28 -5.63 7.11 56.52 0.40 -5.23 16 15 C 0.49 11.79 7.29 -13.05 -0.10 11.70 16 16 O -0.60 -14.87 12.84 5.14 0.07 -14.81 16 17 C -0.14 -2.82 8.86 -37.54 -0.33 -3.15 16 18 C -0.07 -1.18 5.49 -102.17 -0.56 -1.74 16 19 C -0.09 -1.62 8.36 36.01 0.30 -1.32 16 20 C -0.02 -0.29 5.23 -105.06 -0.55 -0.84 16 21 C -0.10 -1.37 9.73 -39.10 -0.38 -1.75 16 22 C -0.11 -1.19 10.03 -39.66 -0.40 -1.59 16 23 C -0.12 -1.32 9.82 -39.42 -0.39 -1.71 16 24 C -0.03 -0.42 6.31 -39.57 -0.25 -0.67 16 25 Cl -0.08 -0.88 28.95 -51.86 -1.50 -2.38 16 26 C -0.10 -1.35 9.56 -39.06 -0.37 -1.72 16 27 H 0.05 0.99 8.13 -51.93 -0.42 0.57 16 28 H 0.05 0.85 8.13 -51.93 -0.42 0.43 16 29 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 30 H 0.08 1.76 7.62 -51.93 -0.40 1.36 16 31 H 0.12 2.81 6.68 -51.93 -0.35 2.47 16 32 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 33 H 0.13 2.52 6.37 -52.49 -0.33 2.19 16 34 H 0.09 1.74 6.72 -51.93 -0.35 1.39 16 35 H 0.04 0.58 7.99 -51.93 -0.42 0.16 16 36 H 0.07 1.28 7.71 -51.93 -0.40 0.88 16 37 H 0.13 1.77 8.06 -52.49 -0.42 1.34 16 38 H 0.13 1.13 8.06 -52.49 -0.42 0.71 16 39 H 0.13 1.16 8.06 -52.49 -0.42 0.73 16 40 H 0.13 1.73 8.06 -52.48 -0.42 1.31 16 LS Contribution 360.22 15.07 5.43 5.43 Total: -1.00 -29.80 360.22 -8.17 -37.97 By element: Atomic # 1 Polarization: 11.68 SS G_CDS: -4.66 Total: 7.01 kcal Atomic # 6 Polarization: 9.67 SS G_CDS: -1.99 Total: 7.68 kcal Atomic # 7 Polarization: -32.46 SS G_CDS: 0.23 Total: -32.23 kcal Atomic # 8 Polarization: -36.79 SS G_CDS: -0.64 Total: -37.43 kcal Atomic # 14 Polarization: 18.98 SS G_CDS: -5.02 Total: 13.96 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -1.50 Total: -2.38 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -29.80 -8.17 -37.97 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000098018805.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.480 kcal (2) G-P(sol) polarization free energy of solvation -29.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.166 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.968 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds