Wall clock time and date at job start Tue Mar 31 2020 05:04:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46501 * 109.46917 * 286.62889 * 3 2 1 5 5 C 1.37091 * 120.00231 * 96.17512 * 4 3 2 6 6 H 1.08007 * 120.00268 * 162.27877 * 5 4 3 7 7 C 1.38951 * 120.00116 * 342.27143 * 5 4 3 8 8 N 1.31412 * 119.99998 * 339.22047 * 7 5 4 9 9 Si 1.86790 * 120.00245 * 159.21646 * 7 5 4 10 10 H 1.48504 * 109.47683 * 180.02562 * 9 7 5 11 11 H 1.48508 * 109.47450 * 300.00156 * 9 7 5 12 12 H 1.48503 * 109.47315 * 60.00106 * 9 7 5 13 13 C 1.34784 * 119.99958 * 276.16922 * 4 3 2 14 14 O 1.21291 * 120.00231 * 180.02562 * 13 4 3 15 15 C 1.50701 * 119.99744 * 0.02562 * 13 4 3 16 16 H 1.09005 * 115.55163 * 325.58512 * 15 13 4 17 17 C 1.52999 * 117.50029 * 111.25399 * 15 13 4 18 18 C 1.52995 * 117.49783 * 179.91108 * 15 13 4 19 19 H 1.09003 * 117.49973 * 0.02562 * 18 15 13 20 20 C 1.50703 * 117.50096 * 145.01835 * 18 15 13 21 21 C 1.38273 * 119.97624 * 59.72621 * 20 18 15 22 22 C 1.38208 * 120.03626 * 179.72726 * 21 20 18 23 23 C 1.38343 * 119.99812 * 0.54807 * 22 21 20 24 24 Cl 1.73600 * 120.02095 * 179.74971 * 23 22 21 25 25 C 1.38444 * 119.96525 * 359.72697 * 23 22 21 26 26 Cl 1.73594 * 120.02258 * 180.02562 * 25 23 22 27 27 C 1.38198 * 119.98504 * 240.00525 * 20 18 15 28 28 H 1.08999 * 109.47090 * 166.62999 * 3 2 1 29 29 H 1.09002 * 109.47363 * 46.62474 * 3 2 1 30 30 H 0.96997 * 120.00456 * 180.02562 * 8 7 5 31 31 H 1.09000 * 117.50091 * 214.98017 * 17 15 13 32 32 H 1.09007 * 117.49566 * 359.97438 * 17 15 13 33 33 H 1.08000 * 119.97923 * 359.97438 * 21 20 18 34 34 H 1.07996 * 120.00234 * 180.25744 * 22 21 20 35 35 H 1.07999 * 119.99914 * 0.02562 * 27 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0965 -0.3944 1.3235 5 6 3.4459 -1.6980 1.5642 6 1 4.0623 -1.9433 2.4165 7 6 3.0070 -2.7037 0.7118 8 7 1.9610 -2.5027 -0.0578 9 14 3.9038 -4.3414 0.6597 10 1 3.2431 -5.2367 -0.3237 11 1 5.3158 -4.1201 0.2563 12 1 3.8661 -4.9695 2.0049 13 6 3.2024 0.5238 2.3045 14 8 3.6073 0.1969 3.4001 15 6 2.8178 1.9567 2.0400 16 1 3.0256 2.3213 1.0339 17 6 1.5694 2.4943 2.7423 18 6 2.9587 2.9506 3.1946 19 1 3.3299 2.5682 4.1454 20 6 3.3736 4.3588 2.8539 21 6 2.5941 5.1224 2.0047 22 6 2.9705 6.4159 1.6959 23 6 4.1337 6.9434 2.2276 24 17 4.6105 8.5658 1.8350 25 6 4.9172 6.1769 3.0734 26 17 6.3766 6.8375 3.7419 27 6 4.5359 4.8841 3.3859 28 1 2.9709 1.0006 -0.2376 29 1 2.9717 -0.7050 -0.7470 30 1 1.6543 -3.2048 -0.6526 31 1 0.9560 3.2127 2.1985 32 1 1.0259 1.8114 3.3954 33 1 1.6886 4.7092 1.5856 34 1 2.3591 7.0133 1.0359 35 1 5.1468 4.2854 4.0452 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068767562.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:04:58 Heat of formation + Delta-G solvation = 41.728658 kcal Electronic energy + Delta-G solvation = -23311.474294 eV Core-core repulsion = 19555.718956 eV Total energy + Delta-G solvation = -3755.755339 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 338.033 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -40.17991 -38.99193 -37.13970 -36.72055 -36.16369 -35.43952 -34.30852 -31.91097 -31.28779 -30.43954 -27.57137 -25.71328 -24.06527 -23.35630 -22.72014 -20.62730 -18.95473 -17.97233 -17.76808 -16.81371 -16.34343 -15.99368 -15.63743 -15.03297 -14.69807 -14.33988 -14.23797 -14.03120 -13.69931 -13.27589 -13.04385 -12.66740 -12.19167 -12.11456 -12.05810 -11.97390 -11.84395 -11.70266 -11.55686 -11.33528 -11.19575 -11.08790 -11.04635 -10.65782 -10.50333 -10.47141 -10.33519 -10.16345 -9.32138 -9.13894 -8.79515 -8.57007 -8.11693 -6.57386 -4.06849 0.71078 0.88493 1.63308 1.99886 3.01599 3.12707 3.18281 3.20833 3.40349 3.64990 3.93538 4.05666 4.21864 4.34580 4.43704 4.71767 4.80972 4.88125 4.91493 4.98895 5.09561 5.10977 5.31434 5.41286 5.50797 5.52940 5.73326 5.77811 5.96309 6.02722 6.09140 6.21743 6.37628 6.44135 6.46772 7.40190 7.82430 8.20628 8.70035 8.92300 9.12110 9.66177 10.48438 Molecular weight = 338.03amu Principal moments of inertia in cm(-1) A = 0.019462 B = 0.002671 C = 0.002497 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1438.377964 B =10481.361163 C =11209.476719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.472 5.472 2 C 0.248 3.752 3 C 0.221 3.779 4 N -0.435 5.435 5 C -0.315 4.315 6 H 0.109 0.891 7 C 0.033 3.967 8 N -0.876 5.876 9 Si 0.929 3.071 10 H -0.284 1.284 11 H -0.271 1.271 12 H -0.272 1.272 13 C 0.481 3.519 14 O -0.572 6.572 15 C -0.156 4.156 16 H 0.117 0.883 17 C -0.144 4.144 18 C -0.100 4.100 19 H 0.131 0.869 20 C -0.021 4.021 21 C -0.106 4.106 22 C -0.094 4.094 23 C -0.041 4.041 24 Cl -0.057 7.057 25 C -0.027 4.027 26 Cl -0.053 7.053 27 C -0.091 4.091 28 H 0.083 0.917 29 H 0.128 0.872 30 H 0.275 0.725 31 H 0.101 0.899 32 H 0.104 0.896 33 H 0.142 0.858 34 H 0.142 0.858 35 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.471 17.821 0.318 18.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.152 5.152 2 C -0.071 4.071 3 C 0.093 3.907 4 N -0.154 5.154 5 C -0.442 4.442 6 H 0.127 0.873 7 C -0.171 4.171 8 N -0.515 5.515 9 Si 0.755 3.245 10 H -0.210 1.210 11 H -0.196 1.196 12 H -0.198 1.198 13 C 0.269 3.731 14 O -0.455 6.455 15 C -0.177 4.177 16 H 0.135 0.865 17 C -0.182 4.182 18 C -0.119 4.119 19 H 0.148 0.852 20 C -0.021 4.021 21 C -0.124 4.124 22 C -0.113 4.113 23 C -0.068 4.068 24 Cl -0.028 7.028 25 C -0.054 4.054 26 Cl -0.024 7.024 27 C -0.110 4.110 28 H 0.101 0.899 29 H 0.146 0.854 30 H 0.085 0.915 31 H 0.119 0.881 32 H 0.123 0.877 33 H 0.159 0.841 34 H 0.160 0.840 35 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 3.083 17.711 0.737 17.992 hybrid contribution 0.837 -0.788 -0.263 1.180 sum 3.920 16.922 0.474 17.377 Atomic orbital electron populations 1.80890 1.13539 1.12301 1.08452 1.29247 0.95295 0.89965 0.92568 1.18758 0.81736 1.00720 0.89451 1.43528 1.55960 1.08473 1.07459 1.19701 1.30099 0.80776 1.13639 0.87337 1.25288 0.94980 0.99883 0.96920 1.69850 1.20231 1.35566 1.25813 0.85948 0.79509 0.80655 0.78405 1.20961 1.19619 1.19762 1.19108 0.83992 0.85448 0.84516 1.90545 1.50631 1.80987 1.23357 1.22430 1.03693 0.94196 0.97426 0.86505 1.23069 0.89725 1.02536 1.02821 1.21055 1.00904 0.89659 1.00267 0.85159 1.19284 0.93270 0.94533 0.95044 1.21220 1.00414 0.93122 0.97680 1.20999 0.94659 0.95850 0.99815 1.20742 0.97124 0.87737 1.01223 1.98379 1.91672 1.19826 1.92947 1.20725 0.90743 0.94493 0.99447 1.98387 1.34351 1.85590 1.84074 1.20920 0.96789 0.92630 1.00629 0.89897 0.85421 0.91471 0.88063 0.87750 0.84081 0.84032 0.83656 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.63 18.54 42.15 0.78 -9.85 16 2 C 0.25 5.18 13.48 -20.76 -0.28 4.90 16 3 C 0.22 4.16 4.91 -6.83 -0.03 4.12 16 4 N -0.44 -9.69 2.60 -117.93 -0.31 -10.00 16 5 C -0.32 -7.84 9.33 -14.94 -0.14 -7.98 16 6 H 0.11 2.86 7.38 -52.48 -0.39 2.47 16 7 C 0.03 0.79 4.88 -17.47 -0.09 0.71 16 8 N -0.88 -21.35 9.46 55.50 0.53 -20.83 16 9 Si 0.93 19.09 29.60 -169.99 -5.03 14.05 16 10 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 11 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 12 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 13 C 0.48 10.27 7.34 -10.98 -0.08 10.19 16 14 O -0.57 -14.21 15.91 5.55 0.09 -14.13 16 15 C -0.16 -2.46 4.78 -91.77 -0.44 -2.90 16 16 H 0.12 1.57 6.54 -51.93 -0.34 1.23 16 17 C -0.14 -2.01 9.56 -26.70 -0.26 -2.27 16 18 C -0.10 -1.38 5.56 -91.74 -0.51 -1.89 16 19 H 0.13 1.97 7.67 -51.93 -0.40 1.57 16 20 C -0.02 -0.24 5.61 -104.62 -0.59 -0.83 16 21 C -0.11 -1.06 9.29 -39.58 -0.37 -1.43 16 22 C -0.09 -0.89 9.83 -39.55 -0.39 -1.27 16 23 C -0.04 -0.43 6.32 -39.47 -0.25 -0.68 16 24 Cl -0.06 -0.57 27.96 -51.86 -1.45 -2.02 16 25 C -0.03 -0.30 6.32 -39.46 -0.25 -0.55 16 26 Cl -0.05 -0.57 27.96 -51.86 -1.45 -2.02 16 27 C -0.09 -1.04 9.52 -39.55 -0.38 -1.41 16 28 H 0.08 1.18 6.28 -51.93 -0.33 0.85 16 29 H 0.13 2.48 6.41 -51.93 -0.33 2.15 16 30 H 0.27 6.52 8.31 -40.82 -0.34 6.18 16 31 H 0.10 1.15 6.18 -51.93 -0.32 0.83 16 32 H 0.10 1.64 8.14 -51.92 -0.42 1.22 16 33 H 0.14 1.21 6.02 -52.49 -0.32 0.89 16 34 H 0.14 1.02 8.06 -52.49 -0.42 0.60 16 35 H 0.15 1.57 8.06 -52.49 -0.42 1.14 16 LS Contribution 339.16 15.07 5.11 5.11 Total: -1.00 -29.04 339.16 -8.60 -37.64 By element: Atomic # 1 Polarization: 6.15 SS G_CDS: -2.82 Total: 3.32 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -4.04 Total: -1.29 kcal Atomic # 7 Polarization: -41.68 SS G_CDS: 1.00 Total: -40.68 kcal Atomic # 8 Polarization: -14.21 SS G_CDS: 0.09 Total: -14.13 kcal Atomic # 14 Polarization: 19.09 SS G_CDS: -5.03 Total: 14.05 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -2.90 Total: -4.04 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -29.04 -8.60 -37.64 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068767562.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.366 kcal (2) G-P(sol) polarization free energy of solvation -29.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.599 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.637 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds