Wall clock time and date at job start Tue Mar 31 2020 05:05:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46502 * 109.46663 * 86.93828 * 3 2 1 5 5 C 1.37102 * 119.99890 * 264.13097 * 4 3 2 6 6 H 1.07996 * 120.00057 * 197.73362 * 5 4 3 7 7 C 1.38953 * 119.99639 * 17.72965 * 5 4 3 8 8 N 1.31403 * 120.00157 * 21.10527 * 7 5 4 9 9 Si 1.86801 * 119.99683 * 201.10176 * 7 5 4 10 10 H 1.48501 * 109.47158 * 90.00210 * 9 7 5 11 11 H 1.48497 * 109.46960 * 210.00119 * 9 7 5 12 12 H 1.48501 * 109.47134 * 330.00052 * 9 7 5 13 13 C 1.34771 * 120.00361 * 84.14123 * 4 3 2 14 14 O 1.21290 * 120.00373 * 179.97438 * 13 4 3 15 15 C 1.50707 * 119.99947 * 359.97438 * 13 4 3 16 16 H 1.09003 * 115.55921 * 34.31620 * 15 13 4 17 17 C 1.52998 * 117.49881 * 248.63020 * 15 13 4 18 18 C 1.52992 * 117.49990 * 180.02562 * 15 13 4 19 19 H 1.08998 * 117.52116 * 214.97180 * 18 15 13 20 20 C 1.50705 * 117.49894 * 0.02562 * 18 15 13 21 21 C 1.38264 * 119.98454 * 60.01435 * 20 18 15 22 22 C 1.38204 * 120.04044 * 180.02562 * 21 20 18 23 23 C 1.38341 * 120.00144 * 359.97438 * 22 21 20 24 24 Cl 1.73594 * 120.02103 * 180.02562 * 23 22 21 25 25 C 1.38450 * 119.95892 * 0.02562 * 23 22 21 26 26 Cl 1.73601 * 120.01786 * 180.02562 * 25 23 22 27 27 C 1.38212 * 119.97892 * 240.01114 * 20 18 15 28 28 H 1.08999 * 109.47502 * 326.93908 * 3 2 1 29 29 H 1.08995 * 109.46788 * 206.93378 * 3 2 1 30 30 H 0.97006 * 120.00029 * 179.97438 * 8 7 5 31 31 H 1.08998 * 117.49499 * 145.02408 * 17 15 13 32 32 H 1.09002 * 117.49962 * 359.97438 * 17 15 13 33 33 H 1.08000 * 119.97758 * 0.02562 * 21 20 18 34 34 H 1.08001 * 119.99622 * 180.27316 * 22 21 20 35 35 H 1.07998 * 119.99530 * 0.02562 * 27 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0963 -0.0729 -1.3793 5 6 3.4398 -1.2845 -1.9212 6 1 4.0562 -1.3247 -2.8070 7 6 2.9948 -2.4609 -1.3305 8 7 1.9449 -2.4432 -0.5404 9 14 3.8890 -4.0676 -1.6597 10 1 4.9582 -4.2557 -0.6465 11 1 2.9263 -5.1954 -1.5787 12 1 4.4932 -4.0290 -3.0157 13 6 3.2081 1.0504 -2.1155 14 8 3.6127 0.9896 -3.2572 15 6 2.8302 2.3823 -1.5200 16 1 3.0368 2.4973 -0.4559 17 6 1.5869 3.0782 -2.0775 18 6 2.9789 3.6203 -2.4065 19 1 3.2835 4.5501 -1.9262 20 6 3.4915 3.4145 -3.8087 21 6 2.7939 2.6069 -4.6878 22 6 3.2632 2.4169 -5.9738 23 6 4.4313 3.0354 -6.3823 24 17 5.0208 2.7977 -7.9977 25 6 5.1298 3.8442 -5.5020 26 17 6.5953 4.6216 -6.0133 27 6 4.6586 4.0333 -4.2152 28 1 2.9718 -0.8604 0.5606 29 1 2.9709 0.9170 0.4655 30 1 1.6340 -3.2645 -0.1284 31 1 0.9757 3.6511 -1.3802 32 1 1.0425 2.5730 -2.8752 33 1 1.8818 2.1242 -4.3694 34 1 2.7154 1.7894 -6.6613 35 1 5.2031 4.6637 -3.5278 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068767570.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:05:05 Heat of formation + Delta-G solvation = 53.256055 kcal Electronic energy + Delta-G solvation = -24159.495442 eV Core-core repulsion = 20404.239969 eV Total energy + Delta-G solvation = -3755.255473 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 338.033 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -40.13555 -38.61771 -36.88747 -36.31679 -35.89022 -35.39630 -34.29966 -31.93762 -30.78617 -29.99447 -27.59302 -25.67404 -23.79162 -23.09078 -22.57117 -20.48969 -18.90839 -17.96731 -17.44500 -16.60977 -16.38348 -15.58438 -15.28161 -14.90340 -14.46495 -14.20254 -13.81591 -13.78657 -13.52482 -13.33862 -13.05538 -12.54893 -12.13331 -12.02609 -11.79136 -11.70165 -11.62294 -11.51707 -11.37386 -11.29321 -11.17564 -10.72835 -10.69172 -10.63831 -10.47112 -10.43334 -10.16995 -10.12617 -9.32789 -8.89498 -8.57618 -8.11085 -7.76538 -6.58923 -4.07684 1.27112 1.47522 2.06071 2.43350 3.00721 3.18031 3.21643 3.28263 3.58171 3.83263 3.94351 4.05186 4.26740 4.54917 4.75076 4.84622 4.92619 5.01767 5.10822 5.18947 5.34349 5.40221 5.52110 5.52630 5.74303 5.83809 5.94934 6.03881 6.06650 6.16605 6.23645 6.43863 6.45510 6.77714 6.93292 7.39158 7.81920 8.19693 8.69176 8.92103 9.11342 9.65914 10.46559 Molecular weight = 338.03amu Principal moments of inertia in cm(-1) A = 0.013615 B = 0.003778 C = 0.003267 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2056.108098 B = 7409.427988 C = 8568.534679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.472 5.472 2 C 0.248 3.752 3 C 0.220 3.780 4 N -0.434 5.434 5 C -0.312 4.312 6 H 0.110 0.890 7 C 0.034 3.966 8 N -0.875 5.875 9 Si 0.926 3.074 10 H -0.275 1.275 11 H -0.285 1.285 12 H -0.268 1.268 13 C 0.475 3.525 14 O -0.555 6.555 15 C -0.164 4.164 16 H 0.120 0.880 17 C -0.149 4.149 18 C -0.096 4.096 19 H 0.119 0.881 20 C -0.016 4.016 21 C -0.021 4.021 22 C -0.107 4.107 23 C -0.029 4.029 24 Cl -0.069 7.069 25 C -0.040 4.040 26 Cl -0.070 7.070 27 C -0.096 4.096 28 H 0.126 0.874 29 H 0.083 0.917 30 H 0.274 0.726 31 H 0.104 0.896 32 H 0.100 0.900 33 H 0.129 0.871 34 H 0.133 0.867 35 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.312 12.159 -2.699 13.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.152 5.152 2 C -0.070 4.070 3 C 0.093 3.907 4 N -0.153 5.153 5 C -0.439 4.439 6 H 0.127 0.873 7 C -0.171 4.171 8 N -0.514 5.514 9 Si 0.753 3.247 10 H -0.201 1.201 11 H -0.211 1.211 12 H -0.193 1.193 13 C 0.264 3.736 14 O -0.438 6.438 15 C -0.185 4.185 16 H 0.137 0.863 17 C -0.187 4.187 18 C -0.114 4.114 19 H 0.137 0.863 20 C -0.016 4.016 21 C -0.039 4.039 22 C -0.127 4.127 23 C -0.056 4.056 24 Cl -0.041 7.041 25 C -0.067 4.067 26 Cl -0.041 7.041 27 C -0.115 4.115 28 H 0.144 0.856 29 H 0.101 0.899 30 H 0.084 0.916 31 H 0.122 0.878 32 H 0.119 0.881 33 H 0.147 0.853 34 H 0.151 0.849 35 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.931 11.984 -3.351 12.785 hybrid contribution 0.918 -1.207 -0.012 1.516 sum 3.850 10.778 -3.363 11.929 Atomic orbital electron populations 1.80894 1.13563 1.12371 1.08405 1.29236 0.95284 0.89990 0.92535 1.18743 0.81746 1.03248 0.86982 1.43613 1.55774 1.06539 1.09362 1.19734 1.29921 0.80704 1.13528 0.87271 1.25275 0.94940 0.99784 0.97059 1.69855 1.19938 1.29606 1.31963 0.85912 0.79050 0.80483 0.79297 1.20087 1.21076 1.19291 1.19193 0.84300 0.84083 0.86059 1.90588 1.50207 1.85629 1.17408 1.22442 1.03885 0.92881 0.99335 0.86255 1.23061 0.90002 1.02285 1.03329 1.20978 1.00178 0.97367 0.92919 0.86319 1.18812 0.93699 0.95634 0.93468 1.20822 0.99346 0.92793 0.90956 1.20803 0.94799 0.99939 0.97111 1.20606 0.96905 1.01569 0.86566 1.98347 1.88255 1.96035 1.21418 1.20445 0.90779 1.00757 0.94762 1.98344 1.34944 1.79708 1.91079 1.20563 0.96249 1.01321 0.93374 0.85594 0.89890 0.91550 0.87813 0.88123 0.85309 0.84867 0.84883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.54 18.54 42.15 0.78 -9.76 16 2 C 0.25 5.10 13.47 -20.76 -0.28 4.82 16 3 C 0.22 4.05 4.91 -6.83 -0.03 4.01 16 4 N -0.43 -9.31 2.60 -117.93 -0.31 -9.62 16 5 C -0.31 -7.56 9.32 -14.93 -0.14 -7.70 16 6 H 0.11 2.84 7.39 -52.49 -0.39 2.45 16 7 C 0.03 0.79 4.87 -17.47 -0.09 0.70 16 8 N -0.88 -21.11 9.47 55.50 0.53 -20.58 16 9 Si 0.93 19.07 29.60 -169.99 -5.03 14.04 16 10 H -0.28 -5.52 7.11 56.52 0.40 -5.12 16 11 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 12 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 13 C 0.47 9.54 7.21 -10.98 -0.08 9.46 16 14 O -0.56 -12.49 11.36 5.55 0.06 -12.43 16 15 C -0.16 -2.46 5.17 -91.77 -0.47 -2.94 16 16 H 0.12 1.48 6.53 -51.93 -0.34 1.14 16 17 C -0.15 -2.00 9.57 -26.75 -0.26 -2.25 16 18 C -0.10 -1.25 6.04 -91.79 -0.55 -1.81 16 19 H 0.12 1.20 8.14 -51.93 -0.42 0.78 16 20 C -0.02 -0.23 4.36 -104.62 -0.46 -0.69 16 21 C -0.02 -0.34 6.17 -39.58 -0.24 -0.58 16 22 C -0.11 -1.69 9.83 -39.56 -0.39 -2.08 16 23 C -0.03 -0.45 6.32 -39.47 -0.25 -0.70 16 24 Cl -0.07 -0.99 27.96 -51.86 -1.45 -2.44 16 25 C -0.04 -0.60 6.32 -39.47 -0.25 -0.85 16 26 Cl -0.07 -0.94 27.96 -51.86 -1.45 -2.39 16 27 C -0.10 -1.38 9.52 -39.55 -0.38 -1.76 16 28 H 0.13 2.41 6.45 -51.93 -0.33 2.08 16 29 H 0.08 1.14 6.26 -51.93 -0.33 0.81 16 30 H 0.27 6.46 8.31 -40.82 -0.34 6.12 16 31 H 0.10 1.15 8.14 -51.93 -0.42 0.73 16 32 H 0.10 1.49 6.17 -51.93 -0.32 1.17 16 33 H 0.13 2.15 5.78 -52.49 -0.30 1.84 16 34 H 0.13 1.91 8.06 -52.49 -0.42 1.49 16 35 H 0.13 1.60 8.06 -52.49 -0.42 1.18 16 LS Contribution 331.18 15.07 4.99 4.99 Total: -1.00 -28.12 331.18 -8.58 -36.70 By element: Atomic # 1 Polarization: 6.69 SS G_CDS: -2.84 Total: 3.85 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -3.87 Total: -2.36 kcal Atomic # 7 Polarization: -40.96 SS G_CDS: 1.00 Total: -39.96 kcal Atomic # 8 Polarization: -12.49 SS G_CDS: 0.06 Total: -12.43 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -5.03 Total: 14.04 kcal Atomic # 17 Polarization: -1.93 SS G_CDS: -2.90 Total: -4.83 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -28.12 -8.58 -36.70 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068767570.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.959 kcal (2) G-P(sol) polarization free energy of solvation -28.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.703 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds