Wall clock time and date at job start Tue Mar 31 2020 05:08:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36705 * 126.61023 * 2 1 4 4 C 1.47422 * 125.77329 * 0.02562 * 3 2 1 5 5 O 1.21626 * 120.00229 * 354.95338 * 4 3 2 6 6 N 1.34777 * 120.00023 * 174.95887 * 4 3 2 7 7 C 1.46504 * 119.99805 * 4.64291 * 6 4 3 8 8 C 1.36949 * 120.00277 * 184.63663 * 6 4 3 9 9 H 1.07996 * 120.00187 * 323.03135 * 8 6 4 10 10 C 1.38989 * 119.99979 * 143.02388 * 8 6 4 11 11 N 1.31410 * 120.00069 * 358.22898 * 10 8 6 12 12 Si 1.86801 * 120.00285 * 178.22905 * 10 8 6 13 13 H 1.48500 * 109.47212 * 59.99925 * 12 10 8 14 14 H 1.48497 * 109.47585 * 179.97438 * 12 10 8 15 15 H 1.48505 * 109.46995 * 300.00203 * 12 10 8 16 16 N 1.34434 * 108.45149 * 180.02562 * 3 2 1 17 17 N 1.28755 * 109.57782 * 359.70832 * 16 3 2 18 18 N 1.35088 * 126.61227 * 180.02562 * 2 1 3 19 19 C 1.40269 * 126.60478 * 359.97438 * 18 2 1 20 20 C 1.38847 * 120.03746 * 325.23352 * 19 18 2 21 21 C 1.38096 * 119.97991 * 180.27683 * 20 19 18 22 22 C 1.38472 * 120.05774 * 359.74338 * 21 20 19 23 23 F 1.35103 * 119.97035 * 180.02562 * 22 21 20 24 24 C 1.38577 * 120.06937 * 0.02562 * 22 21 20 25 25 Cl 1.73605 * 119.99579 * 180.02562 * 24 22 21 26 26 C 1.38226 * 120.01813 * 359.97438 * 24 22 21 27 27 H 1.09007 * 109.46870 * 270.00124 * 1 2 3 28 28 H 1.08997 * 109.47083 * 29.99840 * 1 2 3 29 29 H 1.08990 * 109.47049 * 149.99986 * 1 2 3 30 30 H 1.08995 * 109.47353 * 56.69552 * 7 6 4 31 31 H 1.08998 * 109.46880 * 176.69449 * 7 6 4 32 32 H 1.09001 * 109.46980 * 296.69314 * 7 6 4 33 33 H 0.96998 * 119.99453 * 180.02562 * 11 10 8 34 34 H 1.07998 * 120.00797 * 0.04490 * 20 19 18 35 35 H 1.08007 * 119.97320 * 179.72770 * 21 20 19 36 36 H 1.07999 * 120.03522 * 179.97438 * 26 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3223 1.0973 0.0000 4 6 1.8761 2.5024 0.0005 5 8 0.6920 2.7646 -0.0916 6 7 2.7804 3.4966 0.1030 7 6 4.2122 3.1864 0.1114 8 6 2.3608 4.7967 0.1992 9 1 1.4975 5.1282 -0.3586 10 6 3.0459 5.6894 1.0149 11 7 4.0752 5.2778 1.7206 12 14 2.5038 7.4746 1.1079 13 1 1.1039 7.5419 1.5989 14 1 3.3913 8.2135 2.0415 15 1 2.5847 8.0876 -0.2423 16 7 3.5997 0.6784 -0.0006 17 7 3.6316 -0.6088 0.0053 18 7 2.3127 -1.0843 -0.0005 19 6 1.9076 -2.4273 -0.0006 20 6 0.7618 -2.8077 0.6852 21 6 0.3673 -4.1311 0.6890 22 6 1.1106 -5.0784 0.0051 23 9 0.7227 -6.3725 0.0097 24 6 2.2519 -4.7004 -0.6840 25 17 3.1819 -5.8895 -1.5413 26 6 2.6495 -3.3766 -0.6899 27 1 -0.3633 0.0000 1.0277 28 1 -0.3633 0.8900 -0.5138 29 1 -0.3633 -0.8899 -0.5138 30 1 4.4687 2.6298 -0.7899 31 1 4.7845 4.1135 0.1412 32 1 4.4485 2.5851 0.9894 33 1 4.5530 5.9008 2.2901 34 1 0.1814 -2.0695 1.2185 35 1 -0.5215 -4.4276 1.2262 36 1 3.5391 -3.0817 -1.2265 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071889025.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:08:17 Heat of formation + Delta-G solvation = 60.716645 kcal Electronic energy + Delta-G solvation = -25967.507722 eV Core-core repulsion = 21816.532141 eV Total energy + Delta-G solvation = -4150.975582 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 338.069 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -49.44960 -42.20643 -39.68666 -38.10665 -37.10050 -34.92652 -34.45394 -32.43186 -31.67578 -31.34351 -29.57841 -27.79223 -26.17014 -24.69698 -24.25684 -23.74915 -22.21095 -21.11787 -19.41639 -18.40738 -17.99450 -17.18475 -16.80968 -16.29984 -15.85946 -15.79663 -15.25860 -14.76748 -14.53201 -14.31820 -14.15956 -13.95950 -13.83788 -13.70569 -13.43529 -12.95792 -12.75715 -12.60254 -12.15595 -12.09393 -11.85313 -11.64234 -11.50387 -11.32195 -11.20224 -10.99563 -10.77333 -10.49086 -10.38008 -10.25609 -9.59843 -9.04535 -8.93230 -8.66601 -8.61233 -7.52137 -6.34823 -4.02831 0.07980 0.38817 1.37352 1.49466 2.04208 2.31482 2.79208 3.20877 3.23705 3.27156 3.48624 3.98442 4.07065 4.27448 4.30295 4.32225 4.40268 4.66236 4.76900 4.92649 5.03949 5.11828 5.16213 5.29809 5.34188 5.40701 5.55420 5.74351 5.80259 5.89737 6.11925 6.36094 6.71571 6.81567 6.97689 7.40004 7.52842 8.16539 8.24345 8.49365 9.09387 9.32609 9.91992 10.67624 Molecular weight = 338.07amu Principal moments of inertia in cm(-1) A = 0.030198 B = 0.002489 C = 0.002360 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 927.004116 B =11247.043560 C =11860.361008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.101 3.899 3 C -0.054 4.054 4 C 0.521 3.479 5 O -0.583 6.583 6 N -0.418 5.418 7 C 0.106 3.894 8 C -0.306 4.306 9 H 0.096 0.904 10 C 0.036 3.964 11 N -0.871 5.871 12 Si 0.931 3.069 13 H -0.271 1.271 14 H -0.283 1.283 15 H -0.272 1.272 16 N -0.187 5.187 17 N -0.079 5.079 18 N -0.333 5.333 19 C 0.155 3.845 20 C -0.091 4.091 21 C -0.119 4.119 22 C 0.111 3.889 23 F -0.121 7.121 24 C -0.058 4.058 25 Cl -0.035 7.035 26 C -0.070 4.070 27 H 0.088 0.912 28 H 0.119 0.881 29 H 0.069 0.931 30 H 0.031 0.969 31 H 0.092 0.908 32 H 0.047 0.953 33 H 0.271 0.729 34 H 0.155 0.845 35 H 0.159 0.841 36 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.003 -19.993 -2.605 20.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.032 4.032 3 C -0.191 4.191 4 C 0.307 3.693 5 O -0.467 6.467 6 N -0.134 5.134 7 C -0.038 4.038 8 C -0.435 4.435 9 H 0.114 0.886 10 C -0.169 4.169 11 N -0.509 5.509 12 Si 0.757 3.243 13 H -0.196 1.196 14 H -0.209 1.209 15 H -0.197 1.197 16 N -0.060 5.060 17 N -0.056 5.056 18 N -0.115 5.115 19 C 0.062 3.938 20 C -0.112 4.112 21 C -0.138 4.138 22 C 0.090 3.910 23 F -0.100 7.100 24 C -0.086 4.086 25 Cl -0.006 7.006 26 C -0.090 4.090 27 H 0.106 0.894 28 H 0.138 0.862 29 H 0.088 0.912 30 H 0.049 0.951 31 H 0.110 0.890 32 H 0.066 0.934 33 H 0.081 0.919 34 H 0.172 0.828 35 H 0.177 0.823 36 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -3.799 -20.196 -2.593 20.714 hybrid contribution -0.794 0.517 0.173 0.963 sum -4.594 -19.680 -2.420 20.353 Atomic orbital electron populations 1.20806 0.84867 1.05426 1.04201 1.21932 0.96079 0.85398 0.99751 1.21962 0.87654 0.96940 1.12572 1.16769 0.86024 0.81446 0.85021 1.90570 1.16092 1.82608 1.57479 1.43340 1.05201 1.05150 1.59710 1.21727 0.82244 1.01456 0.98359 1.19537 1.14616 0.83775 1.25531 0.88648 1.25555 0.95942 1.00877 0.94528 1.69910 1.18908 1.36046 1.26029 0.85939 0.78804 0.81258 0.78321 1.19600 1.20861 1.19702 1.74935 1.19585 1.02460 1.08988 1.82078 0.94551 1.04686 1.24246 1.47447 1.07709 1.03743 1.52573 1.17277 0.96059 0.80998 0.99512 1.21196 0.95694 0.96593 0.97678 1.20985 1.01182 0.91231 1.00425 1.17434 0.94110 0.79691 0.99773 1.91570 1.90269 1.33410 1.94721 1.20686 0.95081 0.91517 1.01341 1.98415 1.71800 1.55444 1.74975 1.20768 1.00874 0.89375 0.98033 0.89374 0.86238 0.91186 0.95090 0.88968 0.93404 0.91900 0.82770 0.82334 0.82444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.23 8.11 36.01 0.29 -0.94 16 2 C 0.10 1.70 6.85 -81.71 -0.56 1.14 16 3 C -0.05 -1.13 6.76 -83.54 -0.56 -1.70 16 4 C 0.52 13.01 7.61 -12.52 -0.10 12.92 16 5 O -0.58 -15.19 14.54 5.25 0.08 -15.11 16 6 N -0.42 -11.06 2.97 -123.42 -0.37 -11.42 16 7 C 0.11 2.57 7.79 59.85 0.47 3.03 16 8 C -0.31 -8.44 9.01 -14.99 -0.14 -8.58 16 9 H 0.10 2.66 7.63 -52.49 -0.40 2.26 16 10 C 0.04 0.94 5.19 -17.45 -0.09 0.85 16 11 N -0.87 -23.38 10.88 55.50 0.60 -22.77 16 12 Si 0.93 20.38 29.55 -169.99 -5.02 15.35 16 13 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 14 H -0.28 -6.07 7.11 56.52 0.40 -5.67 16 15 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 16 N -0.19 -3.87 8.90 32.85 0.29 -3.57 16 17 N -0.08 -1.43 13.57 60.35 0.82 -0.61 16 18 N -0.33 -5.10 3.75 -6.69 -0.03 -5.13 16 19 C 0.15 1.79 6.32 -83.56 -0.53 1.26 16 20 C -0.09 -0.79 8.36 -39.41 -0.33 -1.12 16 21 C -0.12 -0.84 10.02 -39.55 -0.40 -1.24 16 22 C 0.11 0.96 7.27 -39.37 -0.29 0.67 16 23 F -0.12 -1.10 16.83 2.25 0.04 -1.06 16 24 C -0.06 -0.55 6.32 -39.46 -0.25 -0.80 16 25 Cl -0.04 -0.33 28.61 -51.86 -1.48 -1.81 16 26 C -0.07 -0.74 9.57 -39.38 -0.38 -1.11 16 27 H 0.09 0.99 7.80 -51.92 -0.41 0.59 16 28 H 0.12 1.85 6.34 -51.93 -0.33 1.52 16 29 H 0.07 0.67 6.97 -51.93 -0.36 0.31 16 30 H 0.03 0.69 7.20 -51.93 -0.37 0.32 16 31 H 0.09 2.34 5.98 -51.93 -0.31 2.03 16 32 H 0.05 1.18 7.32 -51.93 -0.38 0.80 16 33 H 0.27 6.84 8.31 -40.82 -0.34 6.51 16 34 H 0.15 1.15 6.17 -52.49 -0.32 0.82 16 35 H 0.16 0.67 8.06 -52.48 -0.42 0.25 16 36 H 0.16 1.68 8.06 -52.49 -0.42 1.25 16 LS Contribution 329.96 15.07 4.97 4.97 Total: -1.00 -30.95 329.96 -5.82 -36.77 By element: Atomic # 1 Polarization: 2.88 SS G_CDS: -2.87 Total: 0.02 kcal Atomic # 6 Polarization: 7.25 SS G_CDS: -2.85 Total: 4.39 kcal Atomic # 7 Polarization: -44.84 SS G_CDS: 1.32 Total: -43.51 kcal Atomic # 8 Polarization: -15.19 SS G_CDS: 0.08 Total: -15.11 kcal Atomic # 9 Polarization: -1.10 SS G_CDS: 0.04 Total: -1.06 kcal Atomic # 14 Polarization: 20.38 SS G_CDS: -5.02 Total: 15.35 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -1.48 Total: -1.81 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -30.95 -5.82 -36.77 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071889025.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.483 kcal (2) G-P(sol) polarization free energy of solvation -30.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.766 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.717 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds